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DolZOral124_scaffold_4513

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_4513_1
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(79..1014)
DNA (936bp) protein (312aa)
Redox-sensitive transcriptional activator OxyR n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCU4_9BACT rbh
Transcriptional regulator {ECO:0000313|EMBL:KGN79179.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
LysR substrate binding domain-containing protein
DolZOral124_scaffold_4513_2
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1043..2905)
DNA (1863bp) protein (621aa)
Lipoprotein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCU3_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN79178.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
hypothetical protein
DolZOral124_scaffold_4513_3
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

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comp(2929..3471)
DNA (543bp) protein (181aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCU1_9BACT
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:EFI16968.1}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
DolZOral124_scaffold_4513_4
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3490..4359)
DNA (870bp) protein (290aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Por
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCU0_9BACT rbh
glucose-1-phosphate thymidylyltransferase
DolZOral124_scaffold_4513_5
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4536..5543)
DNA (1008bp) protein (336aa)
Mannose-6-phosphate isomerase, class I n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JH57_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN77434.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
mannose-6-phosphate isomerase
DolZOral124_scaffold_4513_6
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5548..7005)
DNA (1458bp) protein (486aa)
Polysaccharide biosynthesis protein n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JH73_9BACT rbh
Uncharacterized protein {ECO:0000313|EMBL:KGN77435.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphy
lipopolysaccharide biosynthesis protein
DolZOral124_scaffold_4513_7
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7177..7293
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCZ3_9BACT
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified
50S ribosomal protein L36
DolZOral124_scaffold_4513_8
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


7320..7700
DNA (381bp) protein (127aa)
30S ribosomal protein S13 n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCZ2_9BACT
30S ribosomal protein S13 {ECO:0000256|HAMAP-Rule:MF_01315}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="
rpsM; 30S ribosomal protein S13
DolZOral124_scaffold_4513_9
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


7729..8118
DNA (390bp) protein (130aa)
30S ribosomal protein S11 n=2 Tax=Bacteroidales RepID=K0X3R8_9PORP
30S ribosomal protein S11 {ECO:0000256|HAMAP-Rule:MF_01310}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="
30S ribosomal protein S11
DolZOral124_scaffold_4513_10
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


8144..8752
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCZ0_9BACT rbh
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="P
rpsD; putative 30S ribosomal protein S4
DolZOral124_scaffold_4513_11
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

8758..9753
DNA (996bp) protein (332aa)
DNA-directed RNA polymerase subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059}; Short=RNAP subunit alpha {ECO:0000256|HAMAP-Rule:MF_00059};; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00059};; RNA polymerase
DNA-directed RNA polymerase subunit alpha (EC:2.7.7.6)
DNA-directed RNA polymerase subunit alpha n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCY9_9BACT rbh
DolZOral124_scaffold_4513_12
Bacteroidetes oral taxon 274, Bacteroidetes, Bacteria

Not on your lists


9759..10247
DNA (489bp) protein (163aa)
50S ribosomal protein L17 n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCY8_9BACT
50S ribosomal protein L17 {ECO:0000256|HAMAP-Rule:MF_01368, ECO:0000256|RuleBase:RU000661}; TaxID=575590 species="Bacteria; Bacteroidetes.;" source="Bacteroidetes oral taxon 274 str. F0058.;"
rplQ; putative 50S ribosomal protein L17
DolZOral124_scaffold_4513_13
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10363..11121
DNA (759bp) protein (253aa)
Serine 3-dehydrogenase (EC:1.1.1.276)
Oxidoreductase, short chain dehydrogenase/reductase family n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JEG6_9BACT rbh
Short-chain dehydrogenase {ECO:0000313|EMBL:KGN76856.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porp
DolZOral124_scaffold_4513_14
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(11194..12309)
DNA (1116bp) protein (372aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum CCUG 30536 RepID=K1N050_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB61674.1}; TaxID=883098 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum CC
serine/threonine-protein kinase pkn1
DolZOral124_scaffold_4513_15
Bergeyella zoohelcum, Bergeyella, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(12390..13259)
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Bergeyella zoohelcum ATCC 43767 RepID=K1MBE6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EKB59703.1}; TaxID=883096 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bergeyella.;" source="Bergeyella zoohelcum AT
serine/threonine-protein kinase pkn1
DolZOral124_scaffold_4513_16
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13471..14652)
DNA (1182bp) protein (394aa)
Cysteine peptidase n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JCM1_9BACT rbh
Aminopeptidase {ECO:0000313|EMBL:KGN82882.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" source="Porphyromonadac
aminopeptidase C
DolZOral124_scaffold_4513_17
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14830..18129
DNA (3300bp) protein (1100aa)
Protein translocase subunit SecA n=1 Tax=Bacteroidetes oral taxon 274 str. F0058 RepID=D7JFR4_9BACT rbh
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; uncla
protein translocase subunit seca
DolZOral124_scaffold_4513_18
Flavobacterium branchiophilum, Flavobacterium, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(18326..18610)
DNA (285bp) protein (95aa)
Probable glycoside hydrolase n=1 Tax=Flavobacterium branchiophilum (strain FL-15) RepID=G2Z3I3_FLABF
putative glycoside hydrolase
Probable glycoside hydrolase {ECO:0000313|EMBL:CCB70432.1}; TaxID=1034807 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Flavobacterium.;" source="Flavobacteriu
Displaying 18 items

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