ggKbase home page

DolZOral124_scaffold_12420

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_12420_1
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1..843
DNA (843bp) protein (281aa)
ABC peptide transporter, fused ATPase domains n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VET0_9RHOB
ABC peptide transporter, fused ATPase domains {ECO:0000313|EMBL:EAQ13418.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Maritimibacter.;" s
ABC peptide transporter
DolZOral124_scaffold_12420_2
Celeribacter baekdonensis, Celeribacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

843..971
DNA (129bp) protein (43aa)
ABC peptide transporter n=1 Tax=Celeribacter baekdonensis B30 RepID=K2JJR9_9RHOB
ABC peptide transporter
ABC peptide transporter {ECO:0000313|EMBL:EKE70799.1}; TaxID=1208323 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Celeribacter.;" source="Celeribacter bae
DolZOral124_scaffold_12420_3
Tateyamaria sp. ANG-S1, Tateyamaria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(972..2354)
DNA (1383bp) protein (461aa)
D-alanyl-D-alanine carboxypeptidase protein n=1 Tax=Roseobacter sp. GAI101 RepID=B7RJQ8_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KIC51902.1}; TaxID=1577905 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Tateyamaria.;" source="Tateyamaria sp. A
dacC2; D-alanyl-D-alanine carboxypeptidase
DolZOral124_scaffold_12420_4

Not on your lists

2704..3039
DNA (336bp) protein (112aa)
ATP-dependent Clp protease adapter protein ClpS n=2 Tax=Sulfitobacter RepID=A3S8G3_9RHOB
Uncharacterized protein {ECO:0000313|EMBL:KKM22597.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ATP-dependent Clp protease adaptor protein ClpS
DolZOral124_scaffold_12420_5
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3056..4027
DNA (972bp) protein (324aa)
Possible ribosomal RNA small subunit methyltransferase C RsmC n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VET4_9RHOB
Possible ribosomal RNA small subunit methyltransferase C RsmC {ECO:0000313|EMBL:EAQ13422.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Mar
ribosomal RNA small subunit methyltransferase C
DolZOral124_scaffold_12420_6
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4024..4866
DNA (843bp) protein (281aa)
Possible oxidoreductase Short-chain dehydrogenase/reductase SDR n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VET5_9RHOB rbh
Possible oxidoreductase Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EAQ13423.1}; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; M
7-alpha-hydroxysteroid dehydrogenase
DolZOral124_scaffold_12420_7
unknown

Not on your lists

comp(4867..5229)
DNA (363bp) protein (121aa)

This feature has no annotations

DolZOral124_scaffold_12420_8
Ruegeria pomeroyi, Ruegeria, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5372..6400)
DNA (1029bp) protein (343aa)
hemE; uroporphyrinogen decarboxylase (EC:4.1.1.37)
Uroporphyrinogen decarboxylase {ECO:0000255|HAMAP-Rule:MF_00218}; Short=UPD {ECO:0000255|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000255|HAMAP-Rule:MF_00218};; EC=4.1.1.37 {ECO:0000255|HAMAP-Rule:MF_0
Uroporphyrinogen decarboxylase n=1 Tax=Ruegeria pomeroyi (strain ATCC 700808 / DSM 15171 / DSS-3) RepID=DCUP_RUEPO rbh
DolZOral124_scaffold_12420_9
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6499..7455
DNA (957bp) protein (319aa)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
hemC; porphobilinogen deaminase HemC (EC:2.5.1.61)
Porphobilinogen deaminase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VER9_9RHOB rbh
DolZOral124_scaffold_12420_10
Defluviimonas sp. 20V17, Defluviimonas, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7684..9093)
DNA (1410bp) protein (470aa)
FAD dependent oxidoreductase n=1 Tax=Thalassobacter arenae DSM 19593 RepID=S9RUN2_9RHOB
FAD-dependent oxidoreductase {ECO:0000313|EMBL:KDB02489.1}; TaxID=1417296 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Defluviimonas.;" source="Defluviimo
D-2-hydroxyglutarate dehydrogenase
DolZOral124_scaffold_12420_11
Maritimibacter alkaliphilus, Maritimibacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9146..9895)
DNA (750bp) protein (250aa)
Coproporphyrinogen-III oxidase {ECO:0000256|PIRNR:PIRNR000167}; EC=1.3.99.22 {ECO:0000256|PIRNR:PIRNR000167};; TaxID=314271 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rho
Coproporphyrinogen-III oxidase n=1 Tax=Maritimibacter alkaliphilus HTCC2654 RepID=A3VER6_9RHOB
coproporphyrinogen III oxidase
Displaying 11 items

View Taxonomy