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DolZOral124_scaffold_2502

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Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2502_1
Beggiatoa alba, Beggiatoa, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..436
DNA (435bp) protein (145aa)
Transcriptional regulator with sigma factor-related N-terminal domain n=1 Tax=Beggiatoa alba B18LD RepID=I3CI55_9GAMM
Transcriptional regulator with sigma factor-related N-terminal domain {ECO:0000313|EMBL:EIJ43298.1}; TaxID=395493 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
DolZOral124_scaffold_2502_2
Shewanella sediminis, Shewanella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(350..2560)
DNA (2211bp) protein (737aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B3682D rbh
PPE repeat-containing protein
PPE-repeat protein {ECO:0000313|EMBL:ABV35645.1}; Flags: Precursor;; TaxID=425104 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Shewanellaceae; Shewanella.;" source="Shewane
DolZOral124_scaffold_2502_3
Candidatus Competibacter denitrificans, Candidatus Competibacter, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2673..3254)
DNA (582bp) protein (194aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B45C83 rbh
Uncharacterized protein {ECO:0000313|EMBL:CDI02072.1}; TaxID=1400863 species="Bacteria; Proteobacteria; Gammaproteobacteria; Competibacteraceae; Candidatus Competibacter.;" source="Candidatus Competib
hypothetical protein
DolZOral124_scaffold_2502_trna_1
unknown

Not on your lists

comp(3522..3594)
DNA (73bp)
transferRNA
DolZOral124_scaffold_2502_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3870..4220
DNA (351bp) protein (117aa)
tRNA (cytidine(34)-2'-O)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01885}; EC=2.1.1.207 {ECO:0000256|HAMAP-Rule:MF_01885};; tRNA (cytidine/uridine-2'-O-)-methyltransferase TrmL {ECO:0000256|HAMAP-R
rRNA methyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B45247
putative tRNA/rRNA methyltransferase YibK
DolZOral124_scaffold_2502_5
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4220..5185
DNA (966bp) protein (322aa)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=870187 species="Bacteria; Proteobacter
FMN adenylyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B78C24 rbh
riboflavin biosynthesis protein RibF
DolZOral124_scaffold_2502_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5222..6649
DNA (1428bp) protein (476aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B58811 rbh
Type I secretion outer membrane protein, TolC family {ECO:0000313|EMBL:EIJ34676.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichacea
type I secretion outer membrane protein, TolC
DolZOral124_scaffold_2502_7
unknown

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6781..7344
DNA (564bp) protein (188aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B45A39
DolZOral124_scaffold_2502_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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7487..7735
DNA (249bp) protein (83aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B355E9
Uncharacterized protein {ECO:0000313|EMBL:EIJ35189.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
conserved hypothetical protein
DolZOral124_scaffold_2502_9
Acinetobacter tandoii, Acinetobacter, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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7795..8991
DNA (1197bp) protein (399aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6A2C8 rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EOR05791.1}; TaxID=1120927 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Moraxellaceae; Acinetobacter.;" source="Acinetobacter tand
DolZOral124_scaffold_2502_10
Cellvibrio japonicus, Cellvibrio, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9084..9980)
DNA (897bp) protein (299aa)
tyrosine recombinase XerC n=1 Tax=Leucothrix mucor RepID=UPI0003B355F5 rbh
xerC; tyrosine recombinase XerC
Tyrosine recombinase XerC {ECO:0000256|HAMAP-Rule:MF_01808}; TaxID=498211 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Cellvibrio.;" source="Cellvibrio ja
DolZOral124_scaffold_2502_11
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9970..10668)
DNA (699bp) protein (233aa)
phytochrome sensor protein n=1 Tax=Leucothrix mucor RepID=UPI0003B3034D
phytochrome sensor protein
Putative phytochrome sensor protein {ECO:0000313|EMBL:ACL71150.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source
DolZOral124_scaffold_2502_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(10665..11498)
DNA (834bp) protein (278aa)
Diaminopimelate epimerase {ECO:0000256|HAMAP-Rule:MF_00197, ECO:0000256|SAAS:SAAS00028055}; Short=DAP epimerase {ECO:0000256|HAMAP-Rule:MF_00197};; EC=5.1.1.7 {ECO:0000256|HAMAP-Rule:MF_00197, ECO:000
diaminopimelate epimerase (EC:5.1.1.7)
diaminopimelate epimerase n=1 Tax=Leucothrix mucor RepID=UPI0003B68577 rbh
DolZOral124_scaffold_2502_13
Thiorhodovibrio sp. 970, Thiorhodovibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11703..11933
DNA (231bp) protein (77aa)
response regulator SirA n=1 Tax=Leucothrix mucor RepID=UPI0003B35A97
Putative redox protein, regulator of disulfide bond formation {ECO:0000313|EMBL:EIC23361.1}; TaxID=631362 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodo
SirA family protein
DolZOral124_scaffold_2502_14
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12027..12437
DNA (411bp) protein (137aa)
Fur family transcriptional regulator n=1 Tax=Leucothrix mucor RepID=UPI0003B5BC61
Ferric uptake regulation protein FUR {ECO:0000313|EMBL:EGG95141.1}; TaxID=937772 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales.;" source="gamma proteobacterium IMCC1989.;"
Fur family transcriptional regulator
DolZOral124_scaffold_2502_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12434..13906
DNA (1473bp) protein (491aa)
3-octaprenyl-4-hydroxybenzoate carboxy-lyase {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011098}; EC=4.1.1.- {ECO:0000256|HAMAP-Rule:MF_01636, ECO:0000256|SAAS:SAAS00011102};; Polyprenyl
3-octaprenyl-4-hydroxybenzoate carboxy-lyase UbiD (EC:4.1.1.-)
3-polyprenyl-4-hydroxybenzoate decarboxylase n=1 Tax=Leucothrix mucor RepID=UPI0003B548C7 rbh
DolZOral124_scaffold_2502_16
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13963..15426
DNA (1464bp) protein (488aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B72094 rbh
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
DolZOral124_scaffold_2502_17
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15454..16488
DNA (1035bp) protein (345aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B532C5 rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD12864.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
hypothetical protein
DolZOral124_scaffold_2502_18
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16478..17092
DNA (615bp) protein (205aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B448EC rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD12865.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
DolZOral124_scaffold_2502_19
Candidatus Thiomargarita nelsonii, Thiomargarita, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17089..17730
DNA (642bp) protein (214aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B73CBC rbh
Uncharacterized protein {ECO:0000313|EMBL:KHD06516.1}; TaxID=1003181 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiomargarita.;" source="Candidatus Thiomarg
DolZOral124_scaffold_2502_20
gamma proteobacterium IMCC2047, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17825..18655
DNA (831bp) protein (277aa)
precorrin-4 methylase (EC:2.1.1.133)
precorrin-4 C11-methyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B360C7 rbh
Cobalt-precorrin-4 C11-methyltransferase {ECO:0000313|EMBL:EGH00248.1}; TaxID=434085 species="Bacteria; Proteobacteria; Gammaproteobacteria.;" source="gamma proteobacterium IMCC2047.;"
DolZOral124_scaffold_2502_21
Moritella viscosa, Moritella, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18753..19835
DNA (1083bp) protein (361aa)
CobW n=1 Tax=Leucothrix mucor RepID=UPI0003B67340 rbh
cobW; cobalamin biosynthesis protein CobW rbh
Cobalamin biosynthesis protein CobW {ECO:0000313|EMBL:CED61531.1}; TaxID=80854 species="Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Moritellaceae; Moritella.;" source="Moritella vi
DolZOral124_scaffold_2502_22
marine gamma proteobacterium HTCC2143, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20003..20824)
DNA (822bp) protein (274aa)
haloacid dehalogenase n=1 Tax=Leucothrix mucor RepID=UPI0003B3B013 rbh
Uncharacterized protein {ECO:0000313|EMBL:EAW32212.1}; TaxID=247633 species="Bacteria; Proteobacteria; Gammaproteobacteria; OMG group; BD1-7 clade.;" source="marine gamma proteobacterium HTCC2143.;"
putative hydrolase of the HAD superfamily
DolZOral124_scaffold_2502_23
Syntrophobacter fumaroxidans, Syntrophobacter, Syntrophobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20830..21825)
DNA (996bp) protein (332aa)
NUDIX hydrolase n=1 Tax=Leucothrix mucor RepID=UPI0003B55249 rbh
NUDIX hydrolase
NUDIX hydrolase {ECO:0000313|EMBL:ABK17103.1}; TaxID=335543 species="Bacteria; Proteobacteria; Deltaproteobacteria; Syntrophobacterales; Syntrophobacteraceae; Syntrophobacter.;" source="Syntrophobacte
DolZOral124_scaffold_2502_24
Acaryochloris marina, Acaryochloris, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(21938..23758)
DNA (1821bp) protein (607aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B43923 rbh
hypothetical protein
TPR domain protein {ECO:0000313|EMBL:ABW27759.1}; TaxID=329726 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Acaryochloris.;" source="Acaryochloris marina (strain MBIC 11017)
DolZOral124_scaffold_2502_25
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23921..24160)
DNA (240bp) protein (80aa)
GTP-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B5682B
Uncharacterized protein {ECO:0000313|EMBL:EPJ46004.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
hypothetical protein
DolZOral124_scaffold_2502_26
Vibrio neptunius, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24307..25959
DNA (1653bp) protein (551aa)
5'-nucleotidase {ECO:0000313|EMBL:KJY87677.1}; EC=3.1.3.5 {ECO:0000313|EMBL:KJY87677.1};; EC=3.6.1.45 {ECO:0000313|EMBL:KJY87677.1};; TaxID=170651 species="Bacteria; Proteobacteria; Gammaproteobacteri
ushA; 5'-nucleotidase (EC:3.1.3.5 3.6.1.45)
5''''-nucleotidase n=1 Tax=Leucothrix mucor RepID=UPI0003B728DB rbh
DolZOral124_scaffold_2502_27
Desulfovibrio hydrothermalis, Desulfovibrio, Desulfovibrionales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26136..27422)
DNA (1287bp) protein (429aa)
TPR repeat-containing protein n=1 Tax=Desulfovibrio hydrothermalis AM13 = DSM 14728 RepID=L0RG29_9DELT
TPR repeat-containing protein {ECO:0000313|EMBL:CCO24511.1}; TaxID=1121451 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfovibrionales; Desulfovibrionaceae; Desulfovibrio.;" source="Des
putative TPR repeat
Displaying 28 items

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