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DolZOral124_scaffold_1242

Search features with annotation key words

Displaying items 1-30 of 46 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1242_1
Bradyrhizobium sp. ORS 285, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

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293..1054
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Bradyrhizobium sp. ORS 285 RepID=H0S1F7_9BRAD
Uncharacterized protein {ECO:0000313|EMBL:CCD88034.1}; TaxID=115808 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source="Bradyrhizobium sp.
DolZOral124_scaffold_1242_trna_3
unknown

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comp(1163..1235)
DNA (73bp)
transferRNA
DolZOral124_scaffold_1242_2
Roseibium sp. TrichSKD4, Roseibium, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1255..2274)
DNA (1020bp) protein (340aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B350C9
5-oxoprolinase {ECO:0000313|EMBL:EFO31071.1}; TaxID=744980 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseibium.;" source="Roseibium sp. TrichSKD4.;"
DolZOral124_scaffold_1242_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(2280..3221)
DNA (942bp) protein (314aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrich
tRNA-dihydrouridine synthase A n=1 Tax=Leucothrix mucor RepID=UPI0003B2F3C8 rbh
tRNA-dihydrouridine synthase A
DolZOral124_scaffold_1242_4
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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3336..3668
DNA (333bp) protein (111aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B55E43
FUN14 family protein {ECO:0000313|EMBL:EGV17065.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 5811.;"
hypothetical protein
DolZOral124_scaffold_1242_5
R_Gammaproteobacteria_57_10, Gammaproteobacteria, Proteobacteria, Bacteria

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3738..4553
DNA (816bp) protein (272aa)
ketopantoate hydroxymethyltransferase (EC:2.1.2.11) Tax=RIFCSPLOWO2_02_FULL_Gammaproteobacteria_57_10_curated
3-methyl-2-oxobutanoate hydroxymethyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B6B5F7 rbh
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase
DolZOral124_scaffold_1242_6
Geobacter bemidjiensis, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

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4587..5573
DNA (987bp) protein (329aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6C47F rbh
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACH38728.1}; TaxID=404380 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteraceae; Geobacter.;" source="Geobacter bemidjien
DolZOral124_scaffold_1242_7
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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5570..6679
DNA (1110bp) protein (370aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B3511C rbh
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
hypothetical protein
DolZOral124_scaffold_1242_8
R_Curvibacter_63_18, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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6672..7163
DNA (492bp) protein (164aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B54B52
hypothetical protein Tax=RIFCSPHIGHO2_12_FULL_Curvibacter_63_18_curated
hypothetical protein
DolZOral124_scaffold_1242_9
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7160..7981)
DNA (822bp) protein (274aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B33758
Uncharacterized protein {ECO:0000313|EMBL:EPJ50058.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
LPS biosynthesis choline kinase
DolZOral124_scaffold_1242_10
Osedax symbiont Rs1, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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8038..9606
DNA (1569bp) protein (523aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B729C4 rbh
Uncharacterized protein {ECO:0000313|EMBL:EPJ49418.1}; TaxID=1330036 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Osedax symbio
thiP; thiamine transporter membrane protein
DolZOral124_scaffold_1242_11
Osedax symbiont Rs2, Oceanospirillales, Gammaproteobacteria, Proteobacteria, Bacteria

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9593..10195
DNA (603bp) protein (201aa)
thiamine ABC transporter ATP-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4DBD2 rbh
Thiamine ABC transporter ATPase {ECO:0000313|EMBL:EPJ50054.1}; TaxID=1330035 species="Bacteria; Proteobacteria; Gammaproteobacteria; Oceanospirillales; unclassified Oceanospirillaceae.;" source="Oseda
thiQ; thiamine ABC transporter ATPase
DolZOral124_scaffold_1242_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10522..11118
DNA (597bp) protein (199aa)
Ubiquinol-cytochrome c reductase iron-sulfur subunit {ECO:0000256|RuleBase:RU004494}; EC=1.10.2.2 {ECO:0000256|RuleBase:RU004494};; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; G
ubiquinol-cytochrome C reductase n=1 Tax=Leucothrix mucor RepID=UPI0003B74915 rbh
ubiquinol-cytochrome C reductase
DolZOral124_scaffold_1242_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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11118..12509
DNA (1392bp) protein (464aa)
cytochrome B n=1 Tax=Leucothrix mucor RepID=UPI0003B53D38 rbh
Cytochrome b {ECO:0000256|RuleBase:RU003385}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
cytochrome B
DolZOral124_scaffold_1242_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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12506..13264
DNA (759bp) protein (253aa)
cytochrome C n=1 Tax=Leucothrix mucor RepID=UPI0003B5EA17 rbh
Cytochrome c1 {ECO:0000313|EMBL:EIJ33672.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea
cytochrome c1
DolZOral124_scaffold_1242_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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13342..13971
DNA (630bp) protein (210aa)
stringent starvation protein A n=1 Tax=Leucothrix mucor RepID=UPI0003B783F9 rbh
Glutathione S-transferase domain-containing protein {ECO:0000313|EMBL:EIJ33671.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae
glutathione S-transferase domain-containing protein
DolZOral124_scaffold_1242_16
Pseudomonas sp. StFLB209, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13968..14408
DNA (441bp) protein (147aa)
peptidase n=1 Tax=Leucothrix mucor RepID=UPI0003B38916
ClpXP protease specificity-enhancing factor
ClpXP protease specificity-enhancing factor {ECO:0000313|EMBL:BAP43545.1}; TaxID=1028989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" sourc
DolZOral124_scaffold_1242_17
Aeromonas diversa, Aeromonas, Aeromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14405..14899
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1268237 species="Bacteria; Proteobacteria; Gammaproteobacteria; Aeromonadales; Aeromonadacea
diacylglycerol kinase n=1 Tax=Leucothrix mucor RepID=UPI0003B4CE44
diacylglycerol kinase
DolZOral124_scaffold_1242_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14921..16258
DNA (1338bp) protein (446aa)
dihydroorotase and related cyclic amidohydrolase (EC:3.5.2.3)
dihydroorotase n=1 Tax=Leucothrix mucor RepID=UPI0003B5B9D8 rbh
Amidohydrolase {ECO:0000313|EMBL:EIJ33668.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205.;"
DolZOral124_scaffold_1242_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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16698..17231
DNA (534bp) protein (178aa)
pilus modification protein PilV n=1 Tax=Leucothrix mucor RepID=UPI0003B498C6
Type IV pilus modification protein PilV {ECO:0000313|EMBL:EIJ33729.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothri
type IV pilus modification protein PilV
DolZOral124_scaffold_1242_20
Serpens flexibilis, Serpens, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

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17243..18055
DNA (813bp) protein (271aa)
hypothetical protein n=1 Tax=Thiothrix disciformis RepID=UPI000377E1C5
Uncharacterized protein {ECO:0000313|EMBL:KHL71218.1}; TaxID=706570 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Serpens.;" source="Serpens flexibilis.;"
type IV pilus assembly protein PilW
DolZOral124_scaffold_1242_21
unknown

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18065..18571
DNA (507bp) protein (169aa)

This feature has no annotations

DolZOral124_scaffold_1242_22

Not on your lists

18631..19131
DNA (501bp) protein (167aa)
methylation site containing protein n=1 Tax=Leucothrix mucor RepID=UPI0003B50885
Uncharacterized protein {ECO:0000313|EMBL:KKL89194.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
type 4 fimbrial biogenesis protein PilE
DolZOral124_scaffold_1242_23
Pantoea sp. YR343, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(19087..19971)
DNA (885bp) protein (295aa)
Release factor glutamine methyltransferase {ECO:0000256|HAMAP-Rule:MF_02126}; Short=RF MTase {ECO:0000256|HAMAP-Rule:MF_02126};; EC=2.1.1.297 {ECO:0000256|HAMAP-Rule:MF_02126};; N5-glutamine methyltra
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B357DC rbh
N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
DolZOral124_scaffold_1242_24
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19975..21051)
DNA (1077bp) protein (359aa)
peptide chain release factor 1 n=1 Tax=Leucothrix mucor RepID=UPI0003B76CA8 rbh
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thi
prfA; peptide chain release factor 1
DolZOral124_scaffold_1242_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21048..22328)
DNA (1281bp) protein (427aa)
Glutamyl-tRNA reductase {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|RuleBase:RU000584}; Short=GluTR {ECO:0000256|HAMAP-Rule:MF_00087};; EC=1.2.1.70 {ECO:0000256|HAMAP-Rule:MF_00087, ECO:0000256|Rule
glutamyl-tRNA reductase n=1 Tax=Leucothrix mucor RepID=UPI0003B301A4 rbh
glutamyl-tRNA reductase
DolZOral124_scaffold_1242_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22574..24316
DNA (1743bp) protein (581aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B77C54 rbh
Tetratricopeptide TPR_2 repeat-containing protein {ECO:0000313|EMBL:EIJ33721.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
hypothetical protein
DolZOral124_scaffold_1242_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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24383..25027
DNA (645bp) protein (215aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B729C0 rbh
Outer-membrane lipoprotein LolB {ECO:0000256|HAMAP-Rule:MF_00233, ECO:0000256|SAAS:SAAS00002103}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales;
outer membrane lipoprotein LolB
DolZOral124_scaffold_1242_trna_1
unknown

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25202..25273
DNA (72bp)
transferRNA
DolZOral124_scaffold_1242_28
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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25355..26296
DNA (942bp) protein (314aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
ribose-phosphate pyrophosphokinase n=1 Tax=Leucothrix mucor RepID=UPI0003B48F1A rbh
Displaying items 1-30 of 46 in total

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