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DolZOral124_scaffold_56

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_56_1
RBG_13_Bacteroidetes_42_15_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(250..2673)
DNA (2424bp) protein (808aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B60D69
hypothetical protein Tax=RBG_13_Bacteroidetes_42_15_curated
hypothetical protein
DolZOral124_scaffold_56_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3181..4758)
DNA (1578bp) protein (526aa)
Apolipoprotein N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148}; Short=ALP N-acyltransferase {ECO:0000256|HAMAP-Rule:MF_01148};; EC=2.3.1.- {ECO:0000256|HAMAP-Rule:MF_01148};; Flags: Precursor;; Ta
apolipoprotein N-acyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B43BFE rbh
apolipoprotein N-acyltransferase
DolZOral124_scaffold_56_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4846..5322)
DNA (477bp) protein (159aa)
Endoribonuclease YbeY {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023089}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00009, ECO:0000256|SAAS:SAAS00023108};; TaxID=870187 species="Bacteria; Pr
rRNA maturation factor n=1 Tax=Leucothrix mucor RepID=UPI0003B68E37
rRNA maturation factor
DolZOral124_scaffold_56_4
Pseudomonas alcaligenes, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5322..6227)
DNA (906bp) protein (302aa)
phosphate starvation protein PhoH n=1 Tax=Leucothrix mucor RepID=UPI0003B4E8A6 rbh
PhoH family protein {ECO:0000313|EMBL:GAD63778.1}; TaxID=1215092 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas alcaligen
Phosphate starvation-inducible ATPase PhoH
DolZOral124_scaffold_56_5
Methylophaga frappieri, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6494..7717)
DNA (1224bp) protein (408aa)
Na(+)-translocating NADH-quinone reductase subunit F n=1 Tax=Leucothrix mucor RepID=UPI0003B79DE4 rbh
Na(+)-translocating NADH-quinone reductase subunit F
Na(+)-translocating NADH-quinone reductase subunit F {ECO:0000256|HAMAP-Rule:MF_00430}; Short=Na(+)-NQR subunit F {ECO:0000256|HAMAP-Rule:MF_00430};; Short=Na(+)-translocating NQR subunit F {ECO:00002
DolZOral124_scaffold_56_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7730..8326)
DNA (597bp) protein (199aa)
Na(+)-translocating NADH-quinone reductase subunit E n=1 Tax=Leucothrix mucor RepID=UPI0003B3D1E2 rbh
Na(+)-translocating NADH-quinone reductase subunit E {ECO:0000256|HAMAP-Rule:MF_00429, ECO:0000256|SAAS:SAAS00170325}; Short=Na(+)-NQR subunit E {ECO:0000256|HAMAP-Rule:MF_00429};; Short=Na(+)-translo
nqrE; Na(+)-translocating NADH-quinone reductase subunit E
DolZOral124_scaffold_56_7
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8327..8998)
DNA (672bp) protein (224aa)
Na(+)-translocating NADH-quinone reductase subunit D n=1 Tax=Leucothrix mucor RepID=UPI0003B30116 rbh
Na(+)-translocating NADH-quinone reductase subunit D {ECO:0000256|HAMAP-Rule:MF_00428, ECO:0000256|SAAS:SAAS00170009}; Short=Na(+)-NQR subunit D {ECO:0000256|HAMAP-Rule:MF_00428};; Short=Na(+)-translo
Na(+)-translocating NADH-quinone reductase subunit D
DolZOral124_scaffold_56_8
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9001..9795)
DNA (795bp) protein (265aa)
Na(+)-translocating NADH-quinone reductase subunit C n=1 Tax=Leucothrix mucor RepID=UPI0003B34E7B rbh
Na(+)-translocating NADH-quinone reductase subunit C {ECO:0000256|HAMAP-Rule:MF_00427}; Short=Na(+)-NQR subunit C {ECO:0000256|HAMAP-Rule:MF_00427};; Short=Na(+)-translocating NQR subunit C {ECO:00002
Na(+)-translocating NADH-quinone reductase subunit C
DolZOral124_scaffold_56_9
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9792..11027)
DNA (1236bp) protein (412aa)
Na(+)-translocating NADH-quinone reductase subunit B n=1 Tax=Leucothrix mucor RepID=UPI0003B35FAF rbh
Na(+)-translocating NADH-quinone reductase subunit B {ECO:0000256|HAMAP-Rule:MF_00426}; Short=Na(+)-NQR subunit B {ECO:0000256|HAMAP-Rule:MF_00426};; Short=Na(+)-translocating NQR subunit B {ECO:00002
Na(+)-translocating NADH-quinone reductase subunit B
DolZOral124_scaffold_56_10
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11027..12382)
DNA (1356bp) protein (452aa)
Na(+)-translocating NADH-quinone reductase subunit A n=1 Tax=Leucothrix mucor RepID=UPI0003B56DD4 rbh
Na(+)-translocating NADH-quinone reductase subunit A {ECO:0000256|HAMAP-Rule:MF_00425, ECO:0000256|SAAS:SAAS00017509}; Short=Na(+)-NQR subunit A {ECO:0000256|HAMAP-Rule:MF_00425};; Short=Na(+)-translo
NADH:ubiquinone oxidoreductase subunit A
DolZOral124_scaffold_56_11
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12421..13794)
DNA (1374bp) protein (458aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (
(dimethylallyl)adenosine tRNA methylthiotransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B3F089 rbh
(dimethylallyl)adenosine tRNA methylthiotransferase
DolZOral124_scaffold_56_12
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13856..14989)
DNA (1134bp) protein (378aa)
deoxyguanosinetriphosphate triphosphohydrolase n=1 Tax=Leucothrix mucor RepID=UPI0003B463CA rbh
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiot
deoxyguanosinetriphosphate triphosphohydrolase
DolZOral124_scaffold_56_13
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14986..16059)
DNA (1074bp) protein (358aa)
3-dehydroquinate synthase {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210858}; EC=4.2.3.4 {ECO:0000256|HAMAP-Rule:MF_00110, ECO:0000256|SAAS:SAAS00210855};; TaxID=870187 species="Bacteria
3-dehydroquinate synthase n=1 Tax=Leucothrix mucor RepID=UPI0003B4502D rbh
3-dehydroquinate synthase
DolZOral124_scaffold_56_14
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16040..16576)
DNA (537bp) protein (179aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=870187 species="Bacteria; Proteobacteria; Gammapr
shikimate kinase n=1 Tax=Leucothrix mucor RepID=UPI0003B496DA
shikimate kinase
DolZOral124_scaffold_56_15
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16702..18876)
DNA (2175bp) protein (725aa)
type IV pilus secretin PilQ n=1 Tax=Leucothrix mucor RepID=UPI0003B3CB1A rbh
Type IV pilus secretin PilQ {ECO:0000313|EMBL:EIJ33978.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="T
pilus assembly protein PilQ
DolZOral124_scaffold_56_16
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18934..19470)
DNA (537bp) protein (179aa)
pilus assembly protein PilP n=1 Tax=Leucothrix mucor RepID=UPI0003B63435
Pilus assembly protein PilP {ECO:0000313|EMBL:EIJ33977.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="T
pilus assembly protein PilP
DolZOral124_scaffold_56_17
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19470..20096)
DNA (627bp) protein (209aa)
pilus assembly protein PilP n=1 Tax=Leucothrix mucor RepID=UPI0003B36AF8 rbh
Pilus assembly protein PilO
Pilus assembly protein PilO {ECO:0000313|EMBL:ACL74096.1}; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Ectothiorhodospiraceae; Thioalkalivibrio.;" source="Thioal
DolZOral124_scaffold_56_18
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20086..20664)
DNA (579bp) protein (193aa)
pilus biogenesis protein PilN n=1 Tax=Leucothrix mucor RepID=UPI0003B3B125
Fimbrial assembly family protein {ECO:0000313|EMBL:EIJ33975.1}; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" sour
pilus biogenesis protein PilN
DolZOral124_scaffold_56_19
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20664..21713)
DNA (1050bp) protein (350aa)
fimbrial assembly protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6C447 rbh
Type IV pilus assembly protein PilM {ECO:0000313|EMBL:EIJ33974.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix ni
type IV pilus assembly protein PilM
DolZOral124_scaffold_56_20
Methylophaga aminisulfidivorans, Methylophaga, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21904..24642
DNA (2739bp) protein (913aa)
multimodular transpeptidase-transglycosylase (EC:2.4.1.129)
peptidase n=1 Tax=Leucothrix mucor RepID=UPI0003B5DB3B rbh
Membrane carboxypeptidase/penicillin-binding protein {ECO:0000313|EMBL:EGL54081.1}; TaxID=1026882 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Piscirickettsiaceae; Methylopha
DolZOral124_scaffold_56_21
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24695..25762)
DNA (1068bp) protein (356aa)
Uroporphyrinogen decarboxylase {ECO:0000256|HAMAP-Rule:MF_00218, ECO:0000256|RuleBase:RU000554}; Short=UPD {ECO:0000256|HAMAP-Rule:MF_00218};; Short=URO-D {ECO:0000256|HAMAP-Rule:MF_00218};; EC=4.1.1.
uroporphyrinogen decarboxylase n=1 Tax=Leucothrix mucor RepID=UPI0003B60344 rbh
Uroporphyrinogen decarboxylase
DolZOral124_scaffold_56_22
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25876..26091)
DNA (216bp) protein (72aa)
30S ribosomal protein S21 n=1 Tax=Leucothrix mucor RepID=UPI0003B43326
30S ribosomal protein S21 {ECO:0000256|HAMAP-Rule:MF_00358, ECO:0000256|RuleBase:RU000667}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothri
SSU ribosomal protein S21P
DolZOral124_scaffold_56_23
Neisseria shayeganii, Neisseria, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26222..26611
DNA (390bp) protein (130aa)
membrane protein n=1 Tax=Leucothrix mucor RepID=UPI0003B58D5F
Outer membrane protein assembly factor BamE {ECO:0000256|HAMAP-Rule:MF_00925}; Flags: Precursor;; TaxID=1032488 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Neis
SmpA/OmlA domain-containing protein
DolZOral124_scaffold_56_24
unknown

Not on your lists

26680..27381
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B3DB0F
DolZOral124_scaffold_56_25
gamma proteobacterium IMCC1989, Alteromonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27464..27934
DNA (471bp) protein (157aa)
single-stranded DNA-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4C7F2
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|RuleBase:RU000524}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=937772 species="Bacteria; Proteobacteria; Gamm
single-strand binding protein
DolZOral124_scaffold_56_26
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28024..28314)
DNA (291bp) protein (97aa)
RNA-binding protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6637A
Uncharacterized protein {ECO:0000313|EMBL:EIJ34060.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
putative RNA-binding protein containing KH domain, possibly ribosomal protein
DolZOral124_scaffold_56_27
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28340..28966
DNA (627bp) protein (209aa)
Ribosomal RNA large subunit methyltransferase E {ECO:0000256|HAMAP-Rule:MF_01547}; EC=2.1.1.166 {ECO:0000256|HAMAP-Rule:MF_01547};; 23S rRNA Um2552 methyltransferase {ECO:0000256|HAMAP-Rule:MF_01547};
23S rRNA methyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B44F2C rbh
ribosomal RNA methyltransferase RrmJ/FtsJ
DolZOral124_scaffold_56_28
Thioalkalivibrio sulfidiphilus, Thioalkalivibrio, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29051..30982
DNA (1932bp) protein (644aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=396588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromati
ATP-dependent metalloprotease n=1 Tax=Leucothrix mucor RepID=UPI0003B466E9 rbh
ATP-dependent metalloprotease FtsH
DolZOral124_scaffold_56_29
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31173..32513
DNA (1341bp) protein (447aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=870187 species="Bacteri
glmM; phosphoglucosamine mutase (EC:5.4.2.10)
phosphoglucosamine mutase n=1 Tax=Leucothrix mucor RepID=UPI0003B3354E rbh
DolZOral124_scaffold_56_30
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(32600..35104)
DNA (2505bp) protein (835aa)
cation transporter n=1 Tax=Leucothrix mucor RepID=UPI0003B3CB22 rbh
Heavy metal translocating P-type ATPase {ECO:0000313|EMBL:EIJ33233.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothri
heavy metal translocating P-type ATPase
Displaying items 1-30 of 128 in total

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