ggKbase home page

DolZOral124_scaffold_561

Search features with annotation key words

Displaying items 1-30 of 51 in total
Loading...
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_561_1
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..195)
DNA (195bp) protein (65aa)
GDP-mannose 4,6-dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; EC=4.2.1.47 {ECO:0000256|HAMAP-Rule:MF_00955};; GDP-D-mannose dehydratase {ECO:0000256|HAMAP-Rule:MF_00955}; TaxID=768671 species="Bacter
GDP-mannose 4,6-dehydratase n=1 Tax=Thiocapsa marina 5811 RepID=F9U980_9GAMM
GDP-mannose 4,6-dehydratase
DolZOral124_scaffold_561_2
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(225..1652)
DNA (1428bp) protein (476aa)
mannose-1-phosphate guanylyltransferase (EC:2.7.7.22)
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BSN6_9GAMM rbh
Mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase {ECO:0000313|EMBL:EIJ34379.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae;
DolZOral124_scaffold_561_3
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1649..3019)
DNA (1371bp) protein (457aa)
manB; phosphomannomutase (EC:5.4.2.8)
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II n=1 Tax=Thiothrix nivea DSM 5205 RepID=I3BX74_9GAMM
Phosphoglucomutase/phosphomannomutase alpha/beta/alpha domain II {ECO:0000313|EMBL:EIJ35967.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thio
DolZOral124_scaffold_561_4
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3173..3688)
DNA (516bp) protein (172aa)
hypothetical protein n=1 Tax=Thiothrix flexilis RepID=UPI00035E4F37
Transcriptional acivator RfaH {ECO:0000313|EMBL:EIJ34277.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DS
transcriptional activator
DolZOral124_scaffold_561_5
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3901..5082)
DNA (1182bp) protein (394aa)
phosphoglycerate kinase (EC:2.7.2.3)
Phosphoglycerate kinase {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532}; EC=2.7.2.3 {ECO:0000256|HAMAP-Rule:MF_00145, ECO:0000256|RuleBase:RU000532};; TaxID=1076588 species="Bacteria;
phosphoglycerate kinase n=1 Tax=Leucothrix mucor RepID=UPI0003B4DB43 rbh
DolZOral124_scaffold_561_6
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5120..7123)
DNA (2004bp) protein (668aa)
Transketolase {ECO:0000256|RuleBase:RU004996}; EC=2.2.1.1 {ECO:0000256|RuleBase:RU004996};; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothri
transketolase n=1 Tax=Leucothrix mucor RepID=UPI0003B51CCA rbh
transketolase
DolZOral124_scaffold_561_7
Sulfuricurvum sp. MLSB, Sulfuricurvum, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

7332..8225
DNA (894bp) protein (298aa)
Glucose-1-phosphate thymidylyltransferase {ECO:0000256|RuleBase:RU003706}; EC=2.7.7.24 {ECO:0000256|RuleBase:RU003706};; TaxID=1537917 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylo
glucose-1-phosphate thymidylyltransferase (EC:2.7.7.24)
Glucose-1-phosphate thymidylyltransferase n=1 Tax=Sulfuricurvum kujiense (strain ATCC BAA-921 / DSM 16994 / JCM 11577 / YK-1) RepID=E4U384_SULKY
DolZOral124_scaffold_561_8
Enterobacter cloacae, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8222..8773
DNA (552bp) protein (184aa)
dTDP-4-dehydrorhamnose 3,5-epimerase n=1 Tax=Leucothrix mucor RepID=UPI0003B4BE40
dTDP-4-dehydrorhamnose 3,5-epimerase
dTDP-4-dehydrorhamnose 3,5-epimerase {ECO:0000313|EMBL:AIX54222.1}; TaxID=550 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Enterobacter; Enterobacter
DolZOral124_scaffold_561_9
Thiobacillus prosperus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9000..10154
DNA (1155bp) protein (385aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, E
S-adenosylmethionine synthetase (EC:2.5.1.6)
S-adenosylmethionine synthetase n=1 Tax=Leucothrix mucor RepID=UPI0003B41B3D rbh
DolZOral124_scaffold_561_10
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10266..11678
DNA (1413bp) protein (471aa)
S-adenosyl-L-homocysteine hydrolase (EC:3.3.1.1)
Adenosylhomocysteinase {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548}; EC=3.3.1.1 {ECO:0000256|HAMAP-Rule:MF_00563, ECO:0000256|RuleBase:RU000548};; S-adenosyl-L-homocysteine hydrola
S-adenosyl-L-homocysteine hydrolase n=1 Tax=Leucothrix mucor RepID=UPI0003B47F15 rbh
DolZOral124_scaffold_561_11
Pseudomonas fluorescens, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11920..13011)
DNA (1092bp) protein (364aa)
acyltransferase n=1 Tax=Leucothrix mucor RepID=UPI0003B486DC rbh
Acyltransferase {ECO:0000313|EMBL:KJZ36908.1}; TaxID=294 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas.;" source="Pseudomonas fluorescens.;"
acyltransferase
DolZOral124_scaffold_561_12
Sedimenticola sp. SIP-G1, Sedimenticola, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13306..14565)
DNA (1260bp) protein (420aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B79A4F rbh
Uncharacterized protein {ECO:0000313|EMBL:AKH20711.1}; TaxID=1543721 species="Bacteria; Proteobacteria; Gammaproteobacteria; Sedimenticola.;" source="Sedimenticola sp. SIP-G1.;"
cytochrome c-type biogenesis protein CcmI
DolZOral124_scaffold_561_13
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14576..15058)
DNA (483bp) protein (161aa)
cytochrome C biogenesis protein CcmH n=1 Tax=Leucothrix mucor RepID=UPI0003B58725
cytochrome c-type biogenesis protein CcmH
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43471.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
DolZOral124_scaffold_561_14
Methyloglobulus morosus, Methyloglobulus, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15055..15594)
DNA (540bp) protein (180aa)
thiol:disulfide interchange protein n=1 Tax=Leucothrix mucor RepID=UPI0003B6B6ED
Thiol:disulfide interchange protein DsbE {ECO:0000313|EMBL:ESS67028.1}; TaxID=1116472 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methyloglobulus.;" sour
thiol:disulfide interchange protein
DolZOral124_scaffold_561_15
Thiolapillus brandeum, Thiolapillus, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15591..17579)
DNA (1989bp) protein (663aa)
heme lyase subunit CcmF n=1 Tax=Leucothrix mucor RepID=UPI0003B4A1CF rbh
cytochrome c-type biogenesis protein CcmF
Thiolapillus brandeum DNA, complete genome {ECO:0000313|EMBL:BAO43469.1}; TaxID=1076588 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiolapillus.;" source="Thiolapillus brandeum.;"
DolZOral124_scaffold_561_16
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17580..18041)
DNA (462bp) protein (154aa)
cytochrome C biogenesis protein CcmE n=1 Tax=Leucothrix mucor RepID=UPI0003B50A5D
Cytochrome c-type biogenesis protein CcmE {ECO:0000256|HAMAP-Rule:MF_01959}; Cytochrome c maturation protein E {ECO:0000256|HAMAP-Rule:MF_01959}; Heme chaperone CcmE {ECO:0000256|HAMAP-Rule:MF_01959};
CcmE/CycJ protein
DolZOral124_scaffold_561_17
GWA2_Polynucleobacter_45_21_curated, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18038..18217)
DNA (180bp) protein (60aa)
hemagglutination activity protein n=1 Tax=Leucothrix mucor RepID=UPI0003B59DE3
Heme exporter protein CcmD Tax=GWA2_Polynucleobacter_45_21_curated
DolZOral124_scaffold_561_18
Thiocapsa marina, Thiocapsa, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18214..18954)
DNA (741bp) protein (247aa)
heme ABC transporter permease n=1 Tax=Leucothrix mucor RepID=UPI0003B437C3 rbh
Cytochrome c assembly protein {ECO:0000313|EMBL:EGV17373.1}; TaxID=768671 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiocapsa.;" source="Thiocapsa marina 581
heme ABC transporter permease
DolZOral124_scaffold_561_19
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18969..19637)
DNA (669bp) protein (223aa)
heme ABC transporter permease n=1 Tax=Leucothrix mucor RepID=UPI0003B735F7 rbh
heme exporter protein CcmB; K02194 heme exporter protein B Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
heme exporter protein CcmB
DolZOral124_scaffold_561_20
Thioflavicoccus mobilis, Thioflavicoccus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19630..20349)
DNA (720bp) protein (240aa)
Cytochrome c biogenesis ATP-binding export protein CcmA {ECO:0000256|HAMAP-Rule:MF_01707}; EC=3.6.3.41 {ECO:0000256|HAMAP-Rule:MF_01707};; Heme exporter protein A {ECO:0000256|HAMAP-Rule:MF_01707}; Ta
cytochrome C biogenesis protein CcmA n=1 Tax=Leucothrix mucor RepID=UPI0003B5BB6B rbh
heme ABC transporter ATP-binding protein CcmA
DolZOral124_scaffold_561_21
RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20424..21077
DNA (654bp) protein (218aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B2FF93 rbh
hypothetical protein Tax=RIFOXYD12_FULL_Gammaproteobacteria_61_37_curated
hypothetical protein
DolZOral124_scaffold_561_22
endosymbiont of Tevnia jerichonana, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21080..22258
DNA (1179bp) protein (393aa)
glutathionylspermidine synthase n=1 Tax=Leucothrix mucor RepID=UPI0003B7126A rbh
Glutathionylspermidine synthase family protein {ECO:0000313|EMBL:EGW55299.1}; TaxID=1049564 species="Bacteria; Proteobacteria; Gammaproteobacteria; sulfur-oxidizing symbionts.;" source="endosymbiont o
glutathionylspermidine synthase
DolZOral124_scaffold_561_23

Not on your lists

comp(22322..23113)
DNA (792bp) protein (264aa)
NH(3)-dependent NAD(+) synthetase {ECO:0000256|RuleBase:RU003812, ECO:0000256|SAAS:SAAS00094448}; EC=6.3.1.5 {ECO:0000256|RuleBase:RU003812, ECO:0000256|SAAS:SAAS00094492};; TaxID=1329637 species="Bac
NAD+ synthetase n=1 Tax=Leucothrix mucor RepID=UPI0003B478DC rbh
NAD synthetase
DolZOral124_scaffold_561_24
Geobacter sp. M18, Geobacter, Desulfuromonadales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23352..26339
DNA (2988bp) protein (996aa)
Glutamate dehydrogenase {ECO:0000313|EMBL:ADW13646.1}; EC=1.4.1.2 {ECO:0000313|EMBL:ADW13646.1};; TaxID=443143 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfuromonadales; Geobacteracea
glutamate dehydrogenase (EC:1.4.1.2)
amino acid dehydrogenase n=1 Tax=Leucothrix mucor RepID=UPI0003B46D57 rbh
DolZOral124_scaffold_561_25
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26566..27957)
DNA (1392bp) protein (464aa)
Putative beta-barrel assembly-enhancing protease {ECO:0000256|HAMAP-Rule:MF_00997}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00997};; Flags: Precursor;; TaxID=870187 species="Bacteria; Proteobacteria; Ga
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B78AB6 rbh
peptidase M48, Ste24p
DolZOral124_scaffold_561_26
Vibrio metschnikovii, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28112..28252)
DNA (141bp) protein (47aa)
death-on-curing protein n=1 Tax=Gilvimarinus chinensis RepID=UPI00036B032E
Doc protein {ECO:0000313|EMBL:EEX35850.1}; TaxID=675813 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio metschnikovii CIP 69.14.;"
DolZOral124_scaffold_561_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28535..29017)
DNA (483bp) protein (161aa)
Uncharacterized protein n=4 Tax=Escherichia coli RepID=B6IBZ3_ECOSE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAG80228.1}; TaxID=409438 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia co
DolZOral124_scaffold_561_28
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29214..29768)
DNA (555bp) protein (185aa)
membrane protein n=1 Tax=Leucothrix mucor RepID=UPI0003B32B30
Uncharacterized protein {ECO:0000313|EMBL:EIJ35347.1}; TaxID=870187 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thiothrix.;" source="Thiothrix nivea DSM 5205
hypothetical protein
DolZOral124_scaffold_561_29
Thiothrix nivea, Thiothrix, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29775..30626)
DNA (852bp) protein (284aa)
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925};; EC=1.5.1.2 {ECO:0000256|HAMA
pyrroline-5-carboxylate reductase n=1 Tax=Leucothrix mucor RepID=UPI0003B6296B rbh
pyrroline-5-carboxylate reductase
DolZOral124_scaffold_561_30
R_Methylophilales_57_10, Methylophilales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30660..31370)
DNA (711bp) protein (237aa)
hypothetical protein n=1 Tax=Leucothrix mucor RepID=UPI0003B4C5A3 rbh
alanine racemase domain-containing protein; K06997 Tax=RIFCSPHIGHO2_02_FULL_Methylophilales_57_10_curated
alanine racemase
Displaying items 1-30 of 51 in total

View Taxonomy