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DolZOral124_scaffold_3274

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Displaying items 1-30 of 46 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_3274_1
Subdoligranulum sp. 4_3_54A2FAA, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..5772)
DNA (5772bp) protein (1924aa)
RHS repeat-associated core domain protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2AWV3_9CLOT
YD repeat protein {ECO:0000313|EMBL:EHL72395.1}; TaxID=665956 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum sp. 4_3_54A2FAA.;"
hypothetical protein
DolZOral124_scaffold_3274_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5994..6569
DNA (576bp) protein (192aa)
hypothetical protein n=1 Tax=Alistipes onderdonkii RepID=UPI000376AF23
Conserved protein of DIM6/NTAB family {ECO:0000313|EMBL:CDD25238.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" sour
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
DolZOral124_scaffold_3274_3
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6580..7578
DNA (999bp) protein (333aa)
TrkA-N domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIG3_9FIRM
TrkA-N domain protein {ECO:0000313|EMBL:EEG76824.1}; Flags: Precursor;; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter
putative potassium channel protein
DolZOral124_scaffold_3274_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7612..8871
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPX9_CLOPH
Membrane protein {ECO:0000313|EMBL:KGG80086.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
hypothetical protein
DolZOral124_scaffold_3274_5
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8855..9205
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99666.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
DolZOral124_scaffold_3274_6
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9202..10371)
DNA (1170bp) protein (390aa)
S-layer domain protein id=4110913 bin=GWC2_Clostridiales_40_7 species=Thermoanaerobacterium thermosaccharolyticum genus=Thermoanaerobacterium taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWC2_Clostridiales_40_7 organism_group=Firmicute
S-layer protein
Tax=BJP_IG2069_Clostridiales_42_11
DolZOral124_scaffold_3274_7
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

comp(10374..13295)
DNA (2922bp) protein (974aa)
Putative uncharacterized protein id=2284881 bin=GWB2_Clostridiales_37_7 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
hypothetical protein
DolZOral124_scaffold_3274_8
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13446..14018)
DNA (573bp) protein (191aa)
Regulatory protein, ArsR n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TU94_ALKMQ
regulatory protein ArsR
Regulatory protein, ArsR {ECO:0000313|EMBL:ABR49762.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (str
DolZOral124_scaffold_3274_9
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14027..15685)
DNA (1659bp) protein (553aa)
Phosphoribulokinase/uridine kinase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TU97_ALKMQ
ATPase AAA {ECO:0000313|EMBL:KJF28423.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
phosphoribulokinase/uridine kinase
DolZOral124_scaffold_3274_10
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15704..16240)
DNA (537bp) protein (179aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;
Signal peptidase I n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFQ8_ALKOO
signal peptidase I
DolZOral124_scaffold_3274_11
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16256..17071)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLW4_CLOBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQK44699.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermen
DolZOral124_scaffold_3274_12
Chitinivibrio alkaliphilus, Chitinivibrio, Chitinivibrionales, Chitinivibrionia, Fibrobacteres, Bacteria

Not on your lists

comp(17074..17973)
DNA (900bp) protein (300aa)
Pseudouridine synthase, RsuA/RluD family n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D8D6_9BACT
Pseudouridine synthase, RsuA/RluD family {ECO:0000313|EMBL:ERP32213.1}; TaxID=1313304 species="Bacteria; Fibrobacteres; Chitinivibrionia; Chitinivibrionales; Chitinivibrionaceae; Chitinivibrio.;" sour
putative ribosomal large subunit pseudouridine synthase
DolZOral124_scaffold_3274_13
unknown

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comp(17985..18830)
DNA (846bp) protein (282aa)

This feature has no annotations

DolZOral124_scaffold_3274_14
Acidaminococcus sp. CAG:542, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(18966..19583)
DNA (618bp) protein (206aa)
Formimidoyltetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Acidaminococcus sp. CAG:542 RepID=R7M3G2_9FIRM
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:CDE94453.1}; TaxID=1262687 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus; environmenta
DolZOral124_scaffold_3274_15
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19592..20848)
DNA (1257bp) protein (419aa)
Imidazolonepropionase {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112}; EC=3.5.2.7 {ECO:0000256|HAMAP-Rule:MF_00372, ECO:0000256|SAAS:SAAS00083112};; Imidazolone-5-propionate hydrolase
hutI; imidazolonepropionase HutI (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Caloramator australicus RC3 RepID=I7KV30_9CLOT
DolZOral124_scaffold_3274_16
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20848..21741)
DNA (894bp) protein (298aa)
glutamate formiminotransferase (EC:4.3.1.4)
Glutamate formiminotransferase {ECO:0000313|EMBL:ABW18142.1}; EC=4.3.1.4 {ECO:0000313|EMBL:ABW18142.1};; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliph
Glutamate formiminotransferase n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MLX5_ALKOO
DolZOral124_scaffold_3274_17
Clostridiales bacterium S7-1-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21752..22939)
DNA (1188bp) protein (396aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
uroc; putative urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Ruminococcus sp. CAG:330 RepID=R7FIV9_9FIRM
DolZOral124_scaffold_3274_18
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22939..23649)
DNA (711bp) protein (237aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AS67_9CLOT
DolZOral124_scaffold_3274_19
Parvimonas sp. oral taxon 110, Parvimonas, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23639..24595)
DNA (957bp) protein (319aa)
NAD dependent epimerase/dehydratase family protein {ECO:0000313|EMBL:EGL35785.1}; EC=5.1.3.- {ECO:0000313|EMBL:EGL35785.1};; TaxID=767100 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pept
NAD dependent epimerase/dehydratase family protein n=1 Tax=Parvimonas sp. oral taxon 110 str. F0139 RepID=F5TDJ6_9FIRM
UDP-glucose 4-epimerase
DolZOral124_scaffold_3274_20
Halorubrum coriense, Halorubrum, Haloferacales, Halobacteria, Euryarchaeota, Archaea

Not on your lists

24857..25156
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=Halorubrum coriense DSM 10284 RepID=M0E6D1_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ELZ43360.1}; TaxID=1227466 species="Archaea; Euryarchaeota; Halobacteria; Haloferacales; Haloferacaceae; Halorubrum.;" source="Halorubrum coriense DSM 10284.;
DolZOral124_scaffold_3274_21
Bacillus subtilis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

25176..25928
DNA (753bp) protein (251aa)
Uncharacterized protein n=2 Tax=Bacillus subtilis RepID=M4KTN4_BACIU
Bacillus subtilis strain HM-66 Contig24, whole genome shotgun sequence {ECO:0000313|EMBL:KIU11665.1}; TaxID=1423 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Ba
hypothetical protein
DolZOral124_scaffold_3274_22
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

26078..27493
DNA (1416bp) protein (472aa)
Transporter n=1 Tax=Thermoanaerobacter ethanolicus CCSD1 RepID=C7IT76_THEET
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=589861 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter e
sodium:neurotransmitter symporter
DolZOral124_scaffold_3274_23
Lachnospiraceae oral taxon 107, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27557..29395)
DNA (1839bp) protein (613aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae oral taxon 107 str. F0167 RepID=F3AZC0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG92107.1}; TaxID=575593 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae oral taxon 107 str. F0167.;"
hypothetical protein
DolZOral124_scaffold_3274_24
Staphylococcus hominis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29431..30045)
DNA (615bp) protein (205aa)
16S rRNA methyltransferase n=1 Tax=Staphylococcus sp. MDS7B RepID=UPI000367F7BC
YbxB protein {ECO:0000313|EMBL:EFS19518.1}; TaxID=435837 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus hominis subsp. hominis C80.;"
16S rRNA methylase
DolZOral124_scaffold_3274_25
BJP_IG2103_Clostridiales_50_15, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30045..31616)
DNA (1572bp) protein (524aa)
Putative glycosyl hydrolase id=2235528 bin=GWB2_Clostridiales_37_7 species=unknown genus=Brevibacillus taxon_order=Bacillales taxon_class=Bacilli phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
glycoside hydrolase
Tax=BJP_IG2103_Clostridiales_50_15
DolZOral124_scaffold_3274_26
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(31921..32310)
DNA (390bp) protein (130aa)
30S ribosomal protein S9 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PTS7_CLOSD
rpsI; 30S ribosomal subunit protein S9
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridiu
DolZOral124_scaffold_3274_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(32320..32751)
DNA (432bp) protein (144aa)
50S ribosomal protein L13 n=188 Tax=Clostridium difficile RepID=RL13_CLOD6
rplM; 50S ribosomal protein L13
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1215060 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
DolZOral124_scaffold_3274_28
Bacillus cibi, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32997..33734)
DNA (738bp) protein (246aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine synthase A 1 (tRNA-uridine isomerase I 1) (tRNA pseudouridylate synthase I 1) (EC:5.4.99.12)
hypothetical protein n=1 Tax=Bacillus sp. ZYK RepID=UPI00031F04E3
DolZOral124_scaffold_3274_29
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33724..34527)
DNA (804bp) protein (268aa)
Energy-coupling factor transporter transmembrane protein EcfT n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EKW1_9FIRM rbh
Energy-coupling factor transporter transmembrane protein EcfT {ECO:0000256|HAMAP-Rule:MF_01461}; Short=ECF transporter T component EcfT {ECO:0000256|HAMAP-Rule:MF_01461};; TaxID=84022 species="Bacteri
ybaF; YbaF
DolZOral124_scaffold_3274_30
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34520..35380)
DNA (861bp) protein (287aa)
Energy-coupling factor transporter ATP-binding protein EcfA {ECO:0000256|HAMAP-Rule:MF_01710}; Short=ECF transporter A component EcfA {ECO:0000256|HAMAP-Rule:MF_01710};; EC=3.6.3.- {ECO:0000256|HAMAP-
Cobalt ABC transporter ATP-binding protein n=1 Tax=Caldanaerobacter subterraneus subsp. yonseiensis KB-1 RepID=U5CLX2_THEYO
ABC transporter-like protein
Displaying items 1-30 of 46 in total

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