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DolZOral124_scaffold_2946

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2946_1
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..448
DNA (447bp) protein (149aa)
elongation factor Tu n=1 Tax=Epulopiscium sp. 'N.t. morphotype B' RepID=UPI00016C0D81
Elongation factor Tu {ECO:0000256|HAMAP-Rule:MF_00118, ECO:0000256|RuleBase:RU004061}; Short=EF-Tu {ECO:0000256|HAMAP-Rule:MF_00118};; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostrid
translation elongation factor Tu
DolZOral124_scaffold_2946_2
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(979..2715)
DNA (1737bp) protein (579aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:238 RepID=R6DX79_9FIRM
Fibronectin-binding protein {ECO:0000313|EMBL:KGG81105.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azoren
fibronectin-binding A-like protein
DolZOral124_scaffold_2946_3

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2931..3806
DNA (876bp) protein (292aa)
YicC protein (Fragment) n=1 Tax=uncultured bacterium (gcode 4) RepID=K1Z6E3_9BACT
YicC protein {ECO:0000313|EMBL:EKD44791.1}; Flags: Fragment;; TaxID=1234023 species="Bacteria; environmental samples.;" source="uncultured bacterium (gcode 4).;"
YicC-like domain-containing protein
DolZOral124_scaffold_2946_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3817..4443
DNA (627bp) protein (209aa)
Guanylate kinase {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00021750}; EC=2.7.4.8 {ECO:0000256|HAMAP-Rule:MF_00328, ECO:0000256|SAAS:SAAS00036702};; GMP kinase {ECO:0000256|HAMAP-Rule:MF_0
gmk; guanylate kinase (EC:2.7.4.8)
guanylate kinase n=1 Tax=Clostridium tyrobutyricum RepID=UPI00031AD173
DolZOral124_scaffold_2946_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

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4471..4677
DNA (207bp) protein (69aa)
DNA-directed RNA polymerase subunit omega {ECO:0000256|HAMAP-Rule:MF_00366, ECO:0000256|SAAS:SAAS00054253}; Short=RNAP omega subunit {ECO:0000256|HAMAP-Rule:MF_00366};; EC=2.7.7.6 {ECO:0000256|HAMAP-R
DNA-directed RNA polymerase subunit omega n=1 Tax=Clostridiales bacterium oral taxon 876 str. F0540 RepID=U2EJ21_9FIRM
DNA-directed RNA polymerase, omega subunit
DolZOral124_scaffold_2946_6
Thermoactinomyces sp. Gus2-1, Thermoactinomyces, Bacillales, Bacilli, Firmicutes, Bacteria

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4708..7074
DNA (2367bp) protein (789aa)
Primosomal protein N' {ECO:0000256|HAMAP-Rule:MF_00983}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00983};; ATP-dependent helicase PriA {ECO:0000256|HAMAP-Rule:MF_00983}; TaxID=1535750 species="Bacteria;
Primosome assembly protein PriA n=1 Tax=Bacillus licheniformis WX-02 RepID=I0UFL2_BACLI
priA; primosome assembly protein PriA
DolZOral124_scaffold_2946_7
Finegoldia magna, Finegoldia, Clostridiales, Clostridia, Firmicutes, Bacteria

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7085..7579
DNA (495bp) protein (165aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS0
def; peptide deformylase (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Finegoldia magna ATCC 53516 RepID=D6SAD0_FINMA
DolZOral124_scaffold_2946_8
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7576..8514
DNA (939bp) protein (313aa)
Methionyl-tRNA formyltransferase {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00043680}; EC=2.1.2.9 {ECO:0000256|HAMAP-Rule:MF_00182, ECO:0000256|SAAS:SAAS00150580};; TaxID=941824 species="B
fmt; methionyl-tRNA formyltransferase (EC:2.1.2.9)
Methionyl-tRNA formyltransferase n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RNW1_9CLOT
DolZOral124_scaffold_2946_9
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8517..9236
DNA (720bp) protein (240aa)
Peptidase, membrane zinc metallopeptidase, putative n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRW5_ALKMQ
peptidase, membrane zinc metallopeptidase
Putative neutral zinc metallopeptidase {ECO:0000313|EMBL:CCZ17376.1}; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sour
DolZOral124_scaffold_2946_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9287..10558
DNA (1272bp) protein (424aa)
Ribosomal RNA small subunit methyltransferase B {ECO:0000256|SAAS:SAAS00013752}; EC=2.1.1.- {ECO:0000256|SAAS:SAAS00276898};; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Pep
16S rRNA methyltransferase n=1 Tax=Sporolactobacillus inulinus RepID=UPI000255C710
rsmB; ribosomal RNA small subunit methyltransferase
DolZOral124_scaffold_2946_11
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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10566..11312
DNA (747bp) protein (249aa)
Protein phosphatase PrpC {ECO:0000313|EMBL:CCP26342.1}; EC=3.1.3.16 {ECO:0000313|EMBL:CCP26342.1};; TaxID=1209989 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobactera
Protein phosphatase PrpC n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVM3_TEPAE
Ser/Thr phosphatase
DolZOral124_scaffold_2946_12
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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11309..13294
DNA (1986bp) protein (662aa)
Protein kinase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TRW1_ALKMQ
protein kinase
Protein kinase {ECO:0000313|EMBL:ABR48929.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (strain QYMF).
DolZOral124_scaffold_2946_13
Gottschalkia acidurici, Gottschalkia, Clostridiales, Clostridia, Firmicutes, Bacteria

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13324..14166
DNA (843bp) protein (281aa)
rsgA; ribosome biogenesis GTPase RsgA (EC:3.6.1.-)
Putative ribosome biogenesis GTPase RsgA {ECO:0000256|HAMAP-Rule:MF_01820}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_01820};; TaxID=1128398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Gotts
Putative ribosome biogenesis GTPase RsgA n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZI6_CLOA9
DolZOral124_scaffold_2946_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14175..14831
DNA (657bp) protein (219aa)
Ribulose-phosphate 3-epimerase {ECO:0000256|PIRNR:PIRNR001461}; EC=5.1.3.1 {ECO:0000256|PIRNR:PIRNR001461};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
Ribulose-phosphate 3-epimerase n=1 Tax=Clostridium difficile CD160 RepID=T3DBB5_CLODI
ribulose-phosphate 3-epimerase
DolZOral124_scaffold_2946_15
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14828..15445
DNA (618bp) protein (206aa)
Thiamine pyrophosphokinase n=4 Tax=Clostridium thermocellum RepID=E6UT46_CLOTL
thiamine pyrophosphokinase
Thiamine pyrophosphokinase {ECO:0000313|EMBL:ABN51813.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium thermocellum
DolZOral124_scaffold_2946_16
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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15504..16178
DNA (675bp) protein (225aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VRL7_9FIRM
Fuculose phosphate aldolase {ECO:0000313|EMBL:KGJ54687.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostr
putative sugar phosphate class II aldolase
DolZOral124_scaffold_2946_17
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16182..17348)
DNA (1167bp) protein (389aa)
Iron-containing alcohol dehydrogenase n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1R1Y6_SPISS
iron-containing alcohol dehydrogenase
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_2946_18
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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17589..18674
DNA (1086bp) protein (362aa)
AraC family transcriptional regulator (EC:5.3.1.23)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W2L6_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY97215.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
DolZOral124_scaffold_2946_19
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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18643..19458
DNA (816bp) protein (272aa)
Purine nucleoside phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; EC=2.4.2.1 {ECO:0000256|PIRNR:PIRNR000477};; Inosine-guanosine phosphorylase {ECO:0000256|PIRNR:PIRNR000477}; TaxID=575609 species="Bac
Purine nucleoside phosphorylase n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N6W4_9FIRM
inosine guanosine and xanthosine phosphorylase family protein
DolZOral124_scaffold_2946_20
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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19607..20725
DNA (1119bp) protein (373aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XC01_9CLOT rbh
Uncharacterized protein {ECO:0000313|EMBL:ENY97212.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter substrate-binding protein/surface lipoprotein
DolZOral124_scaffold_2946_21
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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20796..22289
DNA (1494bp) protein (498aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9XNN0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97211.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter ATP-binding protein
DolZOral124_scaffold_2946_22
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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22291..23376
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W2L2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97210.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter permease
DolZOral124_scaffold_2946_23
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

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23373..24275
DNA (903bp) protein (301aa)
Uncharacterized protein n=1 Tax=Clostridium hathewayi 12489931 RepID=N9W324_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY97209.1}; TaxID=999412 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi 12489931.;"
ABC transporter permease
DolZOral124_scaffold_2946_24
Treponema vincentii, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

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comp(24853..25863)
DNA (1011bp) protein (337aa)
Uracil-xanthine permease n=1 Tax=Treponema vincentii F0403 RepID=S3LB80_9SPIO
Uracil-xanthine permease {ECO:0000313|EMBL:EPF47683.1}; TaxID=1125702 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema vincentii F0403.;"
uraA; uracil transporter
DolZOral124_scaffold_2946_25
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(25915..26106)
DNA (192bp) protein (64aa)
50S ribosomal protein L28 n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PSW1_CLOSD
rpmB; ribosomal protein L28
50S ribosomal protein L28 {ECO:0000256|HAMAP-Rule:MF_00373}; TaxID=499177 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium stick
DolZOral124_scaffold_2946_26
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26349..26705
DNA (357bp) protein (119aa)
Putative alkaline shock protein n=1 Tax=Clostridium acidurici (strain ATCC 7906 / DSM 604 / KCTC 5404 / 9a) RepID=K0AZI0_CLOA9
Alkaline-shock protein {ECO:0000313|EMBL:KGG81126.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H
alkaline shock protein
DolZOral124_scaffold_2946_27

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26721..28343
DNA (1623bp) protein (541aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F336_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKE05195.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
yloV; glycerone kinase protein
DolZOral124_scaffold_2946_28
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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28357..30339
DNA (1983bp) protein (661aa)
RecG-like helicase n=1 Tax=Thermoanaerobacter tengcongensis (strain DSM 15242 / JCM 11007 / NBRC 100824 / MB4) RepID=Q8R9U4_THETN
RecG; ATP-dependent DNA helicase RecG
ATP-dependent DNA helicase RecG {ECO:0000313|EMBL:ERM92399.1}; TaxID=1388761 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Cal
DolZOral124_scaffold_2946_29
Firmicutes bacterium CAG:110, Firmicutes, Bacteria

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30353..30829
DNA (477bp) protein (159aa)
ylbH; putative rRNA methyltransferase YlbH (EC:2.1.1.-)
RsmD family RNA methyltransferase n=1 Tax=Firmicutes bacterium CAG:110 RepID=R5EQ42_9FIRM
RsmD family RNA methyltransferase {ECO:0000313|EMBL:CCX90151.1}; TaxID=1263000 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:110.;"
Displaying 29 items

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