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DolZOral124_scaffold_1513

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_1513_1
Streptococcus anginosus, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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1..1347
DNA (1347bp) protein (449aa)
Conserved repeat protein n=2 Tax=Streptococcus anginosus RepID=E6J124_STRAP
Conserved repeat protein {ECO:0000313|EMBL:EFU22391.1}; TaxID=706437 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus; Streptococcus anginosus group.;" source="
LPXTG cell wall surface protein
DolZOral124_scaffold_1513_2
Peptoniphilus sp. BV3C26, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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1562..2149
DNA (588bp) protein (196aa)
Translation initiation factor IF-3 n=1 Tax=Clostridiales bacterium BV3C26 RepID=U7UH55_9FIRM
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=1111134 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniph
translation initiation factor IF-3
DolZOral124_scaffold_1513_3
Aneurinibacillus aneurinilyticus, Aneurinibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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2162..2359
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=Aneurinibacillus aneurinilyticus ATCC 12856 RepID=U1WF13_ANEAE
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=649747 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Aneurinibacillus group; A
rpmI; 50S ribosomal protein L35
DolZOral124_scaffold_1513_4
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2374..2733
DNA (360bp) protein (120aa)
50S ribosomal protein L20 n=1 Tax=Clostridium sp. JC122 RepID=UPI000289FB39
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
ribosomal protein L20
DolZOral124_scaffold_1513_5
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2916..4271
DNA (1356bp) protein (452aa)
TrkH family potassium uptake protein (EC:3.6.3.14)
Potassium uptake protein, TrkH family n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNP5_ALKMQ
ATP synthase subunit J {ECO:0000313|EMBL:KJF28417.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
DolZOral124_scaffold_1513_6
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4271..4921
DNA (651bp) protein (217aa)
TrkA-N domain protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNP6_ALKMQ
Potassium transporter Trk {ECO:0000313|EMBL:KJF28283.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
TrkA domain-containing protein
DolZOral124_scaffold_1513_7
Oceanobacillus oncorhynchi, Oceanobacillus, Bacillales, Bacilli, Firmicutes, Bacteria

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4921..5661
DNA (741bp) protein (247aa)
RNA methyltransferase TrmH family group 3 n=1 Tax=Peptostreptococcus anaerobius CAG:621 RepID=R5JNB9_9FIRM
Putative TrmH family tRNA/rRNA methyltransferase {ECO:0000313|EMBL:CEI83952.1}; TaxID=545501 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Oceanobacillus.;" source="Oceanobacillus o
tRNA/rRNA methyltransferase (SpoU)
DolZOral124_scaffold_1513_8
unknown

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5688..6920
DNA (1233bp) protein (411aa)

This feature has no annotations

DolZOral124_scaffold_1513_9
Porphyromonas gingivalis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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7019..8209
DNA (1191bp) protein (397aa)
Methionine gamma-lyase {ECO:0000313|EMBL:EOA11211.1}; EC=4.4.1.11 {ECO:0000313|EMBL:EOA11211.1};; TaxID=1195243 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphy
Methionine gamma-lyase n=4 Tax=Porphyromonas gingivalis RepID=T2NEL0_PORGN
megL; methionine gamma-lyase
DolZOral124_scaffold_1513_10
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8325..9776
DNA (1452bp) protein (484aa)
Arginine utilization regulatory protein RocR n=1 Tax=Clostridium ultunense Esp RepID=M1Z1D1_9CLOT
Arginine utilization regulatory protein RocR {ECO:0000313|EMBL:CCQ96675.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium u
rocR; arginine utilization regulatory protein RocR
DolZOral124_scaffold_1513_11
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10182..11918
DNA (1737bp) protein (579aa)
Urocanate hydratase {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS:SAAS00011632}; Short=Urocanase {ECO:0000256|HAMAP-Rule:MF_00577};; EC=4.2.1.49 {ECO:0000256|HAMAP-Rule:MF_00577, ECO:0000256|SAAS
urocanate hydratase (EC:4.2.1.49)
Urocanate hydratase n=2 Tax=Clostridium symbiosum RepID=E7GSP4_CLOSY
DolZOral124_scaffold_1513_12
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12050..13351
DNA (1302bp) protein (434aa)
Putative uncharacterized protein n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XB06_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHL19840.1}; TaxID=796940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium CM5.;"
histidine permease
DolZOral124_scaffold_1513_13
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13388..14641
DNA (1254bp) protein (418aa)
Imidazolonepropionase {ECO:0000313|EMBL:EGY79455.1}; EC=3.5.2.7 {ECO:0000313|EMBL:EGY79455.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Peptoniphilus.;
imidazolonepropionase (EC:3.5.2.7)
Imidazolonepropionase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D4T4_9FIRM
DolZOral124_scaffold_1513_14
Peptoniphilus indolicus, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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14659..15222
DNA (564bp) protein (188aa)
Formimidoyltetrahydrofolate cyclodeaminase {ECO:0000313|EMBL:EGY79456.1}; EC=4.3.1.4 {ECO:0000313|EMBL:EGY79456.1};; TaxID=997350 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphila
formiminotetrahydrofolate cyclodeaminase (EC:4.3.1.4)
Formimidoyltetrahydrofolate cyclodeaminase n=1 Tax=Peptoniphilus indolicus ATCC 29427 RepID=G4D4T5_9FIRM
DolZOral124_scaffold_1513_15
Peptostreptococcaceae bacterium CM5, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15232..16770
DNA (1539bp) protein (513aa)
Histidine ammonia-lyase {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|RuleBase:RU004479}; Short=Histidase {ECO:0000256|HAMAP-Rule:MF_00229};; EC=4.3.1.3 {ECO:0000256|HAMAP-Rule:MF_00229, ECO:0000256|R
hutH; histidine ammonia-lyase (EC:4.3.1.3)
Histidine ammonia-lyase n=1 Tax=Eubacteriaceae bacterium CM5 RepID=G9XB10_9FIRM
DolZOral124_scaffold_1513_16
Peptoniphilus sp. oral taxon 386, Peptoniphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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16783..17661
DNA (879bp) protein (293aa)
Glutamate formimidoyltransferase {ECO:0000313|EMBL:EFI42680.1}; EC=2.1.2.5 {ECO:0000313|EMBL:EFI42680.1};; TaxID=575609 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Pept
glutamate formiminotransferase (EC:2.1.2.5)
Glutamate formimidoyltransferase n=1 Tax=Peptoniphilus sp. oral taxon 386 str. F0131 RepID=D7N717_9FIRM
DolZOral124_scaffold_1513_17
Fusobacterium nucleatum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

17793..19112
DNA (1320bp) protein (440aa)
Transporter gate domain protein n=1 Tax=Fusobacterium nucleatum subsp. nucleatum ATCC 23726 RepID=D5RDC3_FUSNC
Transporter gate domain protein {ECO:0000313|EMBL:EFG95199.1}; TaxID=525283 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium nucleatum subsp.
hypothetical protein
DolZOral124_scaffold_1513_18
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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19455..19655
DNA (201bp) protein (67aa)
Putative uncharacterized protein n=1 Tax=Helcococcus kunzii ATCC 51366 RepID=H3NPP4_9FIRM
csp2; cold shock protein CspA family protein
Uncharacterized protein {ECO:0000313|EMBL:EHR33272.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
DolZOral124_scaffold_1513_19
Chlamydia trachomatis, Chlamydia, Chlamydiales, Chlamydiia, Chlamydiae, Bacteria

Not on your lists

comp(19794..20537)
DNA (744bp) protein (248aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase n=1 Tax=Parvimonas micra ATCC 33270 RepID=A8SID8_9FIRM
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
gpmA; phosphoglyceromutase
DolZOral124_scaffold_1513_20
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


20952..21971
DNA (1020bp) protein (340aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
pheS; phenylalanyl-tRNA synthetase subunit alpha (EC:6.1.1.20)
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=Clostridium bifermentans ATCC 19299 RepID=T4W3F8_CLOBI
DolZOral124_scaffold_1513_21
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


21981..24386
DNA (2406bp) protein (802aa)
pheT; phenylalanyl-tRNA synthetase subunit beta (EC:6.1.1.20)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MI77_ALKOO
DolZOral124_scaffold_1513_22
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24495..24998
DNA (504bp) protein (168aa)
Putative uncharacterized protein n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TNQ0_ALKMQ
hypothetical protein
Cell division protein ZapA {ECO:0000256|SAAS:SAAS00072473}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens
DolZOral124_scaffold_1513_23
BJP_IG2102_Acholeplasmatales_34_18, Acholeplasmatales, Mollicutes, Tenericutes, Bacteria

Not on your lists

25057..27216
DNA (2160bp) protein (720aa)
Peptidase U32 n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MI75_ALKOO
peptidase U32
Tax=BJP_IG2102_Acholeplasmatales_34_18
DolZOral124_scaffold_1513_24
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27230..29587
DNA (2358bp) protein (786aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1121324 species="Bacteria; Firm
Endonuclease MutS2 n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=MUTS2_ALKMQ
MutS2 family protein
DolZOral124_scaffold_1513_25
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29711..30982
DNA (1272bp) protein (424aa)
Na+/H+ antiporter NhaD type n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CUQ6_9CLOT
Membrane protein {ECO:0000313|EMBL:KGG81343.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
arsenical pump family protein
DolZOral124_scaffold_1513_26
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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30992..31477
DNA (486bp) protein (162aa)
Putative uncharacterized protein id=2284841 bin=GWB2_Clostridiales_37_7 species=Haloplasma contractile genus=Haloplasma taxon_order=Haloplasmatales taxon_class=unknown phylum=unknown tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
hypothetical protein
DolZOral124_scaffold_1513_27

Not on your lists

31487..31987
DNA (501bp) protein (167aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Pirellula staleyi (strain ATCC 27377 / DSM 6068 / ICPB 4128) RepID=D2QWB5_PIRSD
DolZOral124_scaffold_1513_28
unknown

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comp(31957..32355)
DNA (399bp) protein (133aa)

This feature has no annotations

DolZOral124_scaffold_1513_29
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32366..33136
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Youngiibacter fragilis 232.1 RepID=V7I0U4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETA78911.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232.1.;"
enzyme of ilve/pabc family
DolZOral124_scaffold_1513_30
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

Not on your lists

33138..33650
DNA (513bp) protein (171aa)
heptaprenyl diphosphate synthase component I; K00805 heptaprenyl diphosphate synthase [EC:2.5.1.30] Tax=GWB2_Clostridiales_37_7_curated
membrane protein (EC:2.5.1.30)
Heptaprenyl diphosphate synthase component I id=2141762 bin=GWB2_Clostridiales_37_7 species=Alkaliphilus metalliredigens genus=Alkaliphilus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
Displaying items 1-30 of 33 in total

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