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DolZOral124_scaffold_3550

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_3550_1
Granulicatella adiacens, Granulicatella, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1..99)
DNA (99bp) protein (33aa)
TipAS antibiotic-recognition domain protein n=1 Tax=Granulicatella adiacens ATCC 49175 RepID=C8NID0_9LACT
TipAS antibiotic-recognition domain protein {ECO:0000313|EMBL:EEW36605.1}; TaxID=638301 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Granulicatella.;" source="Granulicat
DolZOral124_scaffold_3550_2
Lachnospiraceae bacterium 1_4_56FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

335..874
DNA (540bp) protein (180aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 1_4_56FAA RepID=F7JMZ4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN37448.1}; TaxID=658655 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 1_4_56FAA.;"
PAP2 family protein
DolZOral124_scaffold_3550_3
Clostridium sp. BL8, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(882..2051)
DNA (1170bp) protein (390aa)
amidohydrolase (EC:3.5.1.32)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI000300E937 rbh
Uncharacterized protein {ECO:0000313|EMBL:EQB87020.1}; TaxID=1354301 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. BL8.;"
DolZOral124_scaffold_3550_4
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2251..2790
DNA (540bp) protein (180aa)
Transcriptional regulator, XRE family n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MFG4_ALKOO
XRE family transcriptional regulator
Transcriptional regulator, XRE family {ECO:0000313|EMBL:ABW19127.1}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremlan
DolZOral124_scaffold_3550_5
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2799..3851
DNA (1053bp) protein (351aa)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostr
potA; spermidine/putrescine import ATP-binding protein PotA (EC:3.6.3.31)
spermidine/putrescine ABC transporter ATP-binding protein n=1 Tax=[Clostridium] glycolicum RepID=UPI000370B33E
DolZOral124_scaffold_3550_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3838..4653
DNA (816bp) protein (272aa)
Spermidine Putrescine ABC transporter permease component PotB n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ATG6_9CLOT
binding--dependent transport system inner membrane component family protein
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:AIY83583.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
DolZOral124_scaffold_3550_7
[Clostridium] litorale, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4646..5470
DNA (825bp) protein (275aa)
Spermidine Putrescine ABC transporter permease component potC n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CMJ4_9CLOT
Spermidine/putrescine transport system permease protein PotC {ECO:0000313|EMBL:KDR96257.1}; TaxID=1121324 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostrid
potC; spermidine/putrescine ABC transporter permease 2
DolZOral124_scaffold_3550_8
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5482..6513
DNA (1032bp) protein (344aa)
ABC transporter, periplasmic spermidine putrescine-binding protein PotD n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CC92_9CLOT
ABC transporter, periplasmic spermidine putrescine-binding protein PotD {ECO:0000313|EMBL:EOC99919.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisali
spermidine/putrescine ABC transporter ATP-binding protein
DolZOral124_scaffold_3550_9
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6556..7293)
DNA (738bp) protein (246aa)
NAD-dependent protein deacetylase {ECO:0000256|HAMAP-Rule:MF_01968}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01968};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01968}; TaxID=537013 spec
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
NAD-dependent protein deacetylase n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EHQ1_9CLOT
DolZOral124_scaffold_3550_10
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7383..8573)
DNA (1191bp) protein (397aa)
Probable tRNA sulfurtransferase {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094284}; EC=2.8.1.4 {ECO:0000256|HAMAP-Rule:MF_00021, ECO:0000256|SAAS:SAAS00094270};; Probable tRNA sulfurtran
Probable tRNA sulfurtransferase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=THII_ALKMQ
thiamine biosynthesis protein ThiI
DolZOral124_scaffold_3550_11
Natranaerobius thermophilus, Natranaerobius, Natranaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8574..9734)
DNA (1161bp) protein (387aa)
Aminotransferase class V n=1 Tax=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) RepID=B2A0N7_NATTJ
class V aminotransferase
Aminotransferase class V {ECO:0000313|EMBL:ACB85917.1}; TaxID=457570 species="Bacteria; Firmicutes; Clostridia; Natranaerobiales; Natranaerobiaceae; Natranaerobius.;" source="Natranaerobius thermophil
DolZOral124_scaffold_3550_12
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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9843..10835
DNA (993bp) protein (331aa)
L-asparaginase n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1CCA8_9CLOT
Asparaginase {ECO:0000313|EMBL:KGG79766.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.;"
asparaginase/glutaminase
DolZOral124_scaffold_3550_13
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10836..13130)
DNA (2295bp) protein (765aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQK1_CLOC7
diguanylate cyclase/phosphodiesterase
Diguanylate cyclase/phosphodiesterase {ECO:0000313|EMBL:ADL52207.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovo
DolZOral124_scaffold_3550_14
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13127..15460)
DNA (2334bp) protein (778aa)
Diguanylate cyclase/phosphodiesterase n=1 Tax=Clostridium cellulovorans (strain ATCC 35296 / DSM 3052 / OCM 3 / 743B) RepID=D9SQK1_CLOC7
Diguanylate cyclase {ECO:0000313|EMBL:KJF26907.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
diguanylate cyclase/phosphodiesterase
DolZOral124_scaffold_3550_15
Peptostreptococcaceae bacterium CM2, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15957..18482
DNA (2526bp) protein (842aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Eubacteriaceae bacterium CM2 RepID=V9HJD7_9FIRM
Diguanylate cyclase (GGDEF) domain-containing protein {ECO:0000313|EMBL:EHL14624.1}; TaxID=796939 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostrept
sensory box/GGDEF family protein
DolZOral124_scaffold_3550_16
Tepidanaerobacter acetatoxydans, Tepidanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists


18623..19258
DNA (636bp) protein (212aa)
50S ribosomal protein L25 n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LS41_TEPAE
rplY; 50S ribosomal protein L25
50S ribosomal protein L25 {ECO:0000256|HAMAP-Rule:MF_01334, ECO:0000313|EMBL:CCP24782.1}; General stress protein CTC {ECO:0000256|HAMAP-Rule:MF_01334}; TaxID=1209989 species="Bacteria; Firmicutes; Clo
DolZOral124_scaffold_3550_17
unknown

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comp(19345..20268)
DNA (924bp) protein (308aa)

This feature has no annotations

DolZOral124_scaffold_3550_18
Haloplasma contractile, Haloplasma, Haloplasmatales, Bacteria

Not on your lists

comp(20301..21260)
DNA (960bp) protein (320aa)
Glycerate dehydrogenase protein {ECO:0000313|EMBL:ERJ13551.1}; EC=1.1.1.29 {ECO:0000313|EMBL:ERJ13551.1};; TaxID=1033810 species="Bacteria; Haloplasmatales; Haloplasmataceae; Haloplasma.;" source="Hal
phosphoglycerate dehydrogenase (EC:1.1.1.95)
Glycerate dehydrogenase protein n=1 Tax=Haloplasma contractile SSD-17B RepID=U2EG07_9BACT
DolZOral124_scaffold_3550_19
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21476..22678
DNA (1203bp) protein (401aa)
Amino acid/amide ABC transporter substrate-binding protein, HAAT family n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1MRD9_9CLOT
Branched-chain amino acid ABC transporter substrate-binding protein {ECO:0000313|EMBL:KJF25836.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
amino acid/amide ABC transporter substrate-binding protein, HAAT family
DolZOral124_scaffold_3550_20
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22815..23723
DNA (909bp) protein (303aa)
Branched-chain amino acid transport system / permease component family protein id=2177753 bin=GWB2_Clostridiales_37_7 species=Desulfosporosinus sp. OT genus=Desulfosporosinus taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
livH1; high-affinity branched-chain amino acid transport system permease protein LivH
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_3550_21
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23725..24780
DNA (1056bp) protein (352aa)
Inner-membrane translocator n=1 Tax=Thermincola potens (strain JR) RepID=D5XC50_THEPJ
inner-membrane translocator
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_3550_22
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24780..25541
DNA (762bp) protein (254aa)
Phosphonate-transporting ATPase id=2177751 bin=GWB2_Clostridiales_37_7 species=Tepidanaerobacter acetatoxydans genus=Tepidanaerobacter taxon_order=Thermoanaerobacterales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
ABC transporter
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_3550_23
BJP_IG2157_Clostridiales_35_16, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25541..26245
DNA (705bp) protein (235aa)
ABC transporter related protein id=2177750 bin=GWB2_Clostridiales_37_7 species=Desulfotomaculum hydrothermale genus=Desulfotomaculum taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
livF; leucine/isoleucine/valine transporter subunit ; ATP-binding component of ABC superfamily
Tax=BJP_IG2157_Clostridiales_35_16
DolZOral124_scaffold_3550_24
Chloroherpeton thalassium, Chloroherpeton, Chlorobiales, Chlorobia, Chlorobi, Bacteria

Not on your lists

comp(26367..27677)
DNA (1311bp) protein (437aa)
Deoxyribodipyrimidine photo-lyase {ECO:0000313|EMBL:ACF14868.1}; EC=4.1.99.3 {ECO:0000313|EMBL:ACF14868.1};; TaxID=517418 species="Bacteria; Chlorobi; Chlorobia; Chlorobiales; Chlorobiaceae; Chloroher
Deoxyribodipyrimidine photo-lyase n=1 Tax=Chloroherpeton thalassium (strain ATCC 35110 / GB-78) RepID=B3QX58_CHLT3
deoxyribodipyrimidine photo-lyase
DolZOral124_scaffold_3550_25
Planktothrix agardhii, Planktothrix, Oscillatoriales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(27723..27983)
DNA (261bp) protein (87aa)
grxC; glutaredoxin (EC:1.20.4.1)
Glutaredoxin n=2 Tax=Prochlorococcus marinus RepID=A2C008_PROM1
GrxC {ECO:0000313|EMBL:KEI68748.1}; TaxID=388467 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Oscillatoriales; Planktothrix.;" source="Planktothrix agardhii NIVA-CYA 126/8.;"
DolZOral124_scaffold_3550_26
Dehalobacter sp. UNSWDHB, Dehalobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28108..31173)
DNA (3066bp) protein (1022aa)
diguanylate cyclase n=1 Tax=Dehalobacter sp. E1 RepID=UPI00031AC3F6
diguanylate cyclase/phosphodiesterase (GGDEF & EAL domains) with PAS/PAC sensor(s)
Diguanylate cyclase {ECO:0000313|EMBL:EQB20938.1}; TaxID=1339256 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Dehalobacter.;" source="Dehalobacter sp. UNSWDHB.;"
DolZOral124_scaffold_3550_27
Acetobacterium woodii, Acetobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31182..34274)
DNA (3093bp) protein (1031aa)
Diguanylate cyclase (GGDEF) domain-containing protein n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LXY8_CLOCD
signal transduction protein containing an EAL domain
Signal transduction protein containing an EAL domain {ECO:0000313|EMBL:AFA48601.1}; TaxID=931626 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Acetobacterium.;" source="Ace
DolZOral124_scaffold_3550_28
[Clostridium] clariflavum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(34491..35333)
DNA (843bp) protein (281aa)
ATPase involved in chromosome partitioning n=1 Tax=Clostridium clariflavum (strain DSM 19732 / NBRC 101661 / EBR45) RepID=G8LZ70_CLOCD
chromosome partitioning ATPase
ATPase involved in chromosome partitioning {ECO:0000313|EMBL:AEV70032.1}; TaxID=720554 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridi
DolZOral124_scaffold_3550_29
Sporomusa ovata, Sporomusa, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(35326..35934)
DNA (609bp) protein (203aa)
Molybdenum hydroxylase accessory protein, YgfJ family n=1 Tax=Sporomusa ovata DSM 2662 RepID=T0IPZ5_9FIRM
Molybdenum hydroxylase accessory protein, YgfJ family {ECO:0000313|EMBL:EQB26572.1}; TaxID=1123288 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Sporomusa.;" source="
molybdenum hydroxylase accessory protein, YgfJ family
DolZOral124_scaffold_3550_30
unknown

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comp(35927..36010)
DNA (84bp) protein (28aa)

This feature has no annotations

Displaying 30 items

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