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DolZOral124_scaffold_2074

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_2074_1
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..302)
DNA (300bp) protein (100aa)
Replication initiator protein A domain protein n=1 Tax=Fusobacterium gonidiaformans ATCC 25563 RepID=E5C024_9FUSO
Replication initiator protein A {ECO:0000313|EMBL:ERJ82148.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium
putative replication initiation protein
DolZOral124_scaffold_2074_2
Catonella morbi, Catonella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(385..666)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Catonella morbi ATCC 51271 RepID=V2Z4D4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ESL01775.1}; TaxID=592026 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Catonella.;" source="Catonella morbi ATCC 51271.;"
membrane protein
DolZOral124_scaffold_2074_3
Clostridium clostridioforme CAG:511, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(696..2297)
DNA (1602bp) protein (534aa)
23S rRNA (Uracil-5-)-methyltransferase RumA n=3 Tax=Clostridium clostridioforme RepID=N9WKP8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDF26329.1}; TaxID=1263066 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
23S rRNA (uracil-5-)-methyltransferase RumA
DolZOral124_scaffold_2074_4
Vibrio sp. HENC-01, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2482..3759)
DNA (1278bp) protein (426aa)
Probable D-serine dehydratase {ECO:0000256|HAMAP-Rule:MF_01030}; EC=4.3.1.18 {ECO:0000256|HAMAP-Rule:MF_01030};; D-serine deaminase {ECO:0000256|HAMAP-Rule:MF_01030}; TaxID=992010 species="Bacteria; P
D-serine dehydratase (EC:4.3.1.18)
D-serine dehydratase n=1 Tax=Oceanimonas smirnovii RepID=UPI0003635BD4
DolZOral124_scaffold_2074_5
Spirochaeta sp. JC230, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(3761..4816)
DNA (1056bp) protein (352aa)
6-phosphofructokinase n=1 Tax=Spirochaeta thermophila (strain ATCC 700085 / DSM 6578 / Z-1203) RepID=G0GBF7_SPITZ
6-phosphofructokinase {ECO:0000313|EMBL:KGE71192.1}; TaxID=1480694 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta sp. JC230.;"
6-phosphofructokinase
DolZOral124_scaffold_2074_6
unknown

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comp(4846..5208)
DNA (363bp) protein (121aa)

This feature has no annotations

DolZOral124_scaffold_2074_7
unknown

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comp(5217..5804)
DNA (588bp) protein (196aa)

This feature has no annotations

DolZOral124_scaffold_2074_8
unknown

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comp(5797..6309)
DNA (513bp) protein (171aa)

This feature has no annotations

DolZOral124_scaffold_2074_9
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6306..7466)
DNA (1161bp) protein (387aa)
AAA-4 family protein n=7 Tax=Clostridium thermocellum RepID=H8EI54_CLOTM
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ABN54088.1}; TaxID=203119 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium therm
DolZOral124_scaffold_2074_10
Roseburia sp. CAG:309, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7491..8009)
DNA (519bp) protein (173aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=1262945 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiracea
Peptidyl-prolyl cis-trans isomerase (rotamase)-cyclophilin family (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Roseburia sp. CAG:309 RepID=R6YPL7_9FIRM
DolZOral124_scaffold_2074_11
RBG_13_Ignavibacteria_36_8_curated, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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comp(8018..8479)
DNA (462bp) protein (154aa)
7,8-dihydro-8-oxoguanine-triphosphatase Tax=RBG_13_Ignavibacteria_36_8_curated
7,8-dihydro-8-oxoguanine triphosphatase id=4834068 bin=GWC2_Ignavibacteria_38_9 species=Ignavibacterium album genus=Ignavibacterium taxon_order=Ignavibacteriales taxon_class=Ignavibacteria phylum=Ignavibacteriae tax=GWC2_Ignavibacteria_38_9 organism_group=Ignavibacteria
7,8-dihydro-8-oxoguanine-triphosphatase
DolZOral124_scaffold_2074_12
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8476..9141)
DNA (666bp) protein (222aa)
Probable GTP-binding protein EngB n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=ENGB_ALKMQ
Probable GTP-binding protein EngB {ECO:0000256|HAMAP-Rule:MF_00321}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;
engB; ribosome biogenesis GTP-binding protein YsxC
DolZOral124_scaffold_2074_13
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9131..11479)
DNA (2349bp) protein (783aa)
Lon protease {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174}; EC=3.4.21.53 {ECO:0000256|HAMAP-Rule:MF_01973, ECO:0000256|PIRNR:PIRNR001174};; ATP-dependent protease La {ECO:0000256|HA
ATP-dependent protease La (EC:3.4.21.53)
Lon protease n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MIS5_ALKOO
DolZOral124_scaffold_2074_14
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11500..12771)
DNA (1272bp) protein (424aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1AR31_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridia
endopeptidase Clp ATP-binding regulatory subunit ClpX
DolZOral124_scaffold_2074_15
Thermobrachium celere, Thermobrachium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12786..13370)
DNA (585bp) protein (195aa)
ATP-dependent Clp protease, proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopep
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Thermobrachium celere DSM 8682 RepID=R7RV14_9CLOT
DolZOral124_scaffold_2074_16
[Clostridium] sticklandii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13524..14810)
DNA (1287bp) protein (429aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-R
Trigger factor n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PWA0_CLOSD
tig; Trigger factor (TF)
DolZOral124_scaffold_2074_17
Lachnospiraceae bacterium 7_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15007..17577)
DNA (2571bp) protein (857aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 7_1_58FAA RepID=H1C7Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO35283.1}; TaxID=658087 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 7_1_58FAA.;"
lipoprotein
DolZOral124_scaffold_2074_18
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

Not on your lists

17837..18412
DNA (576bp) protein (192aa)
flavin reductase n=1 Tax=Alistipes RepID=UPI00028990EC
Conserved protein/domain typically associated with flavoprotein oxygenases, DIM6/NTAB family
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_2074_19
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18422..19417
DNA (996bp) protein (332aa)
TrkA-N domain protein n=1 Tax=Dethiobacter alkaliphilus AHT 1 RepID=C0GIG3_9FIRM
TrkA-N domain protein {ECO:0000313|EMBL:EEG76824.1}; Flags: Precursor;; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter
TrkA-N domain-containing protein
DolZOral124_scaffold_2074_20
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19451..20710
DNA (1260bp) protein (420aa)
Putative uncharacterized protein n=1 Tax=Clostridium phytofermentans (strain ATCC 700394 / DSM 18823 / ISDg) RepID=A9KPX9_CLOPH
Membrane protein {ECO:0000313|EMBL:KGG80086.1}; TaxID=1156417 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caloranaerobacter.;" source="Caloranaerobacter azorensis H53214.
hypothetical protein
DolZOral124_scaffold_2074_21
Caldisalinibacter kiritimatiensis, Caldisalinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20694..21041
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Clostridiaceae bacterium L21-TH-D2 RepID=R1ASM0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOC99666.1}; TaxID=1304284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Caldisalinibacter.;" source="Caldisalinibacter kiritimati
hypothetical protein
DolZOral124_scaffold_2074_22
BJP_IG2069_Clostridiales_42_11, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21042..22214)
DNA (1173bp) protein (391aa)
hypothetical protein n=1 Tax=Paenibacillus fonticola RepID=UPI00036C4192
S-layer protein
Tax=BJP_IG2069_Clostridiales_42_11
DolZOral124_scaffold_2074_23
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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comp(22217..25114)
DNA (2898bp) protein (966aa)
Putative uncharacterized protein id=2284881 bin=GWB2_Clostridiales_37_7 species=Clostridium cellulolyticum genus=Clostridium taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
hypothetical protein Tax=GWB2_Clostridiales_37_7_curated
hypothetical protein
DolZOral124_scaffold_2074_24
Alkaliphilus metalliredigens, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25260..25826)
DNA (567bp) protein (189aa)
Regulatory protein, ArsR n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TU94_ALKMQ
regulatory protein ArsR
Regulatory protein, ArsR {ECO:0000313|EMBL:ABR49762.1}; TaxID=293826 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus metalliredigens (str
DolZOral124_scaffold_2074_25
Clostridium aceticum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25835..27493)
DNA (1659bp) protein (553aa)
Phosphoribulokinase/uridine kinase n=1 Tax=Alkaliphilus metalliredigens (strain QYMF) RepID=A6TU97_ALKMQ
ATPase AAA {ECO:0000313|EMBL:KJF28423.1}; TaxID=84022 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium aceticum.;"
phosphoribulokinase/uridine kinase
DolZOral124_scaffold_2074_26
[Eubacterium] yurii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27510..28046)
DNA (537bp) protein (179aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=864565 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptocl
Signal peptidase I n=1 Tax=Eubacterium yurii subsp. margaretiae ATCC 43715 RepID=E0QJH4_9FIRM
signal peptidase I
DolZOral124_scaffold_2074_27
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28060..28875)
DNA (816bp) protein (272aa)
Uncharacterized protein n=1 Tax=Clostridium bifermentans ATCC 638 RepID=T4VLW4_CLOBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQK44699.1}; TaxID=1233171 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clostridium] bifermen
DolZOral124_scaffold_2074_28
Chitinivibrio alkaliphilus, Chitinivibrio, Chitinivibrionales, Chitinivibrionia, Fibrobacteres, Bacteria

Not on your lists

comp(28877..29776)
DNA (900bp) protein (300aa)
rluC1; ribosomal large subunit pseudouridine synthase C (EC:5.4.99.24)
Pseudouridine synthase, RsuA/RluD family n=1 Tax=candidate division TG3 bacterium ACht1 RepID=U7D8D6_9BACT
Pseudouridine synthase, RsuA/RluD family {ECO:0000313|EMBL:ERP32213.1}; TaxID=1313304 species="Bacteria; Fibrobacteres; Chitinivibrionia; Chitinivibrionales; Chitinivibrionaceae; Chitinivibrio.;" sour
DolZOral124_scaffold_2074_29
unknown

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comp(29784..30617)
DNA (834bp) protein (278aa)

This feature has no annotations

Displaying 29 items

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