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DolZOral124_scaffold_3121

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_3121_1
Trypanosoma vivax, Trypanosoma, Kinetoplastida, Eukaryota

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727..3582
DNA (2856bp) protein (952aa)
Leucine-rich repeat protein, putative n=1 Tax=Trypanosoma vivax (strain Y486) RepID=F9WTW6_TRYVY
Leucine-rich repeat protein, putative {ECO:0000313|EMBL:CCD21012.1}; TaxID=1055687 species="Eukaryota; Euglenozoa; Kinetoplastida; Trypanosomatidae; Trypanosoma; Duttonella.;" source="Trypanosoma viva
hypothetical protein
DolZOral124_scaffold_3121_2
Thioploca ingrica, Thioploca, Thiotrichales, Gammaproteobacteria, Proteobacteria, Bacteria

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3638..4939
DNA (1302bp) protein (434aa)
Receptor protein kinase n=1 Tax=Beggiatoa sp. PS RepID=A7BQ37_9GAMM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:BAP55783.1}; TaxID=40754 species="Bacteria; Proteobacteria; Gammaproteobacteria; Thiotrichales; Thiotrichaceae; Thioploca.;" source="Thioploca ingrica.;"
DolZOral124_scaffold_3121_3
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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5002..6393
DNA (1392bp) protein (464aa)
Glycine--tRNA ligase {ECO:0000255|HAMAP-Rule:MF_00253}; EC=6.1.1.14 {ECO:0000255|HAMAP-Rule:MF_00253};; Glycyl-tRNA synthetase {ECO:0000255|HAMAP-Rule:MF_00253}; Short=GlyRS {ECO:0000255|HAMAP-Rule:MF
Glycine--tRNA ligase n=1 Tax=Clostridium sp. CAG:221 RepID=R6FUA8_9CLOT
glycyl-tRNA synthetase
DolZOral124_scaffold_3121_4
Caloranaerobacter azorensis, Caloranaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6450..7274
DNA (825bp) protein (275aa)
Putative pyruvate, phosphate dikinase regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921}; Short=PPDK regulatory protein {ECO:0000256|HAMAP-Rule:MF_00921};; EC=2.7.11.32 {ECO:0000256|HAMAP-Rule:MF_00
Putative pyruvate, phosphate dikinase regulatory protein n=1 Tax=Clostridium sticklandii (strain ATCC 12662 / DSM 519 / JCM 1433 / NCIB 10654) RepID=E3PSN4_CLOSD rbh
yqfL; positive regulator of gluconeogenesis
DolZOral124_scaffold_3121_5
Firmicutes bacterium CAG:145, Firmicutes, Bacteria

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7302..8306
DNA (1005bp) protein (335aa)
Phosphohydrolase-associated domain protein n=1 Tax=Firmicutes bacterium CAG:145 RepID=R6EP12_9FIRM
Deoxyguanosinetriphosphate triphosphohydrolase-like protein {ECO:0000256|HAMAP-Rule:MF_01212}; TaxID=1263005 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:14
deoxyguanosinetriphosphate triphosphohydrolase-like protein
DolZOral124_scaffold_3121_6
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8308..10134
DNA (1827bp) protein (609aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1444290 species="Bacteria; Firmicutes;
DNA primase n=1 Tax=Clostridium novyi (strain NT) RepID=A0Q1P5_CLONN
dnaG; DNA primase
DolZOral124_scaffold_3121_7
Alkaliphilus oremlandii, Alkaliphilus, Clostridiales, Clostridia, Firmicutes, Bacteria

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10191..11276
DNA (1086bp) protein (362aa)
RNA polymerase sigma factor SigA n=1 Tax=Alkaliphilus oremlandii (strain OhILAs) RepID=A8MG96_ALKOO
RpoD family RNA polymerase sigma factor
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=350688 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Alkaliphilus.;" source="Alkaliphilus oremland
DolZOral124_scaffold_3121_8
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11309..11953
DNA (645bp) protein (215aa)
SAM-dependent methyltransferase n=1 Tax=Clostridium arbusti RepID=UPI000289E5D1
SAM-dependent methyltransferase {ECO:0000313|EMBL:KGK87995.1}; TaxID=1487921 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HMP27.;"
hypothetical protein
DolZOral124_scaffold_3121_9
Ruminiclostridium thermocellum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11937..13055
DNA (1119bp) protein (373aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=203119 species="Bacteria
UPF0135 protein n=7 Tax=Clostridium thermocellum RepID=U4MN78_CLOTM rbh
hypothetical protein
DolZOral124_scaffold_3121_10
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

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13313..13909
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family n=1 Tax=Anaerostipes caccae DSM 14662 RepID=B0MDA0_9FIRM
Transcriptional regulator, TetR family {ECO:0000313|EMBL:EDR97920.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes cacca
transcriptional regulator, TetR family
DolZOral124_scaffold_3121_11
Desulfosporosinus sp. I2, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13906..15036
DNA (1131bp) protein (377aa)
RND family efflux transporter, MFP subunit n=1 Tax=Desulfosporosinus acidiphilus (strain DSM 22704 / JCM 16185 / SJ4) RepID=I4D7I2_DESAJ
Putative Co/Zn/Cd efflux system membrane fusion protein {ECO:0000313|EMBL:KJR49082.1}; TaxID=1617025 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" sour
RND family efflux transporter, MFP subunit
DolZOral124_scaffold_3121_12
GWB2_Clostridiales_37_7_curated, Clostridiales, Bacteria

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15029..18085
DNA (3057bp) protein (1019aa)
Predicted transporter protein id=2063562 bin=GWB2_Clostridiales_37_7 species=[Clostridium] stercorarium genus=unknown taxon_order=Clostridiales taxon_class=Clostridia phylum=Firmicutes tax=GWB2_Clostridiales_37_7 organism_group=Firmicute organism_desc=Good +
efflux pump protein Tax=GWB2_Clostridiales_37_7_curated
cation/multidrug efflux pump
DolZOral124_scaffold_3121_13
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

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18338..19180
DNA (843bp) protein (281aa)
Uncharacterized protein conserved in bacteria n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUV0_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL41592.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
DolZOral124_scaffold_3121_14
unknown

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19183..21090
DNA (1908bp) protein (636aa)

This feature has no annotations

DolZOral124_scaffold_3121_trna_1
unknown

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21141..21213
DNA (73bp)
transferRNA
DolZOral124_scaffold_3121_15
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(22004..22717)
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2BWJ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI76610.1}; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
hypothetical protein
DolZOral124_scaffold_3121_16
Selenomonas artemidis, Selenomonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

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23148..24095
DNA (948bp) protein (316aa)
Periplasmic binding protein n=1 Tax=Selenomonas artemidis F0399 RepID=E7N303_9FIRM
Periplasmic binding protein {ECO:0000313|EMBL:EFW29564.1}; TaxID=749551 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Selenomonas.;" source="Selenomonas artemidis F03
periplasmic binding protein
Displaying 17 items

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