ggKbase home page

DolZOral124_scaffold_5912

Search features with annotation key words

Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_5912_1
Porphyromonadaceae bacterium COT-184 OH4590, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2..583
DNA (582bp) protein (194aa)
ABC transporter, ATP-binding protein n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UM66_TANFA
ABC transporter ATP-binding protein {ECO:0000313|EMBL:KGN78622.1}; TaxID=1517682 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; unclassified Porphyromonadaceae.;" so
ABC transporter ATP-binding protein
DolZOral124_scaffold_5912_2
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

588..1025
DNA (438bp) protein (146aa)
DNA-(apurinic or apyrimidinic site) lyase ;Pyrimidine dimer DNA glycosylase (EC:4.2.99.18 3.2.2.17) Tax=GWF2_Bacteroidetes_33_38_curated
DNA-(Apurinic or apyrimidinic site) lyase ;Pyrimidine dimer DNA glycosylase id=4263540 bin=GWF2_Bacteroidetes_33_38 species=Ignisphaera aggregans genus=Ignisphaera taxon_order=Desulfurococcales taxon_class=Thermoprotei phylum=Crenarchaeota tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
Pyrimidine dimer DNA glycosylase
DolZOral124_scaffold_5912_3
GWF2_OD1_44_350, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

1242..2711
DNA (1470bp) protein (490aa)
RNA polymerase, sigma 54 subunit, RpoN {ECO:0000313|EMBL:KKT72089.1}; TaxID=1619000 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWF2_44_350.;"
RNA polymerase, sigma 54 subunit, rpon/sigl id=2301163 bin=GWB2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
RNA polymerase sigma54 factor
DolZOral124_scaffold_5912_4

Not on your lists

2827..4950
DNA (2124bp) protein (708aa)
Uncharacterized protein n=2 Tax=root RepID=K0WSN0_9PORP rbh
Uncharacterized protein {ECO:0000313|EMBL:KKN14936.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
DolZOral124_scaffold_5912_5
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5034..7205
DNA (2172bp) protein (724aa)
Outer membrane receptor protein id=2136763 bin=GWD2_Bacteroidetes_33_33 species=Owenweeksia hongkongensis genus=Owenweeksia taxon_order=Flavobacteriales taxon_class=Flavobacteriia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
outer membrane receptor protein; K02014 iron complex outermembrane recepter protein Tax=GWD2_Bacteroidetes_33_33_curated
TonB-dependent receptor
DolZOral124_scaffold_5912_6
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7222..7923
DNA (702bp) protein (234aa)
Putative uncharacterized protein id=3747251 bin=GWF2_Bacteroidetes_33_38 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699
hypothetical protein Tax=GWF2_Bacteroidetes_33_38_curated
hypothetical protein
DolZOral124_scaffold_5912_7
Zhouia amylolytica, Zhouia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

7910..8272
DNA (363bp) protein (121aa)
UPF0102 protein P278_24640 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=1286632 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Zhouia.;" source="Zhouia amylolytica
UPF0102 protein HMPREF9456_01158 id=2579871 bin=GWF2_Bacteroidetes_41_9 species=Dysgonomonas mossii genus=Dysgonomonas taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_41_9 organism_group=Bacteroidetes
hypothetical protein
DolZOral124_scaffold_5912_8
Muricauda lutaonensis, Muricauda, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

comp(8327..9043)
DNA (717bp) protein (239aa)
D-alanyl-D-alanine dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924}; Short=D-Ala-D-Ala dipeptidase {ECO:0000256|HAMAP-Rule:MF_01924};; EC=3.4.13.22 {ECO:0000256|HAMAP-Rule:MF_01924};; TaxID=516051 specie
peptidase M15 n=1 Tax=Flavobacteriaceae bacterium HQM9 RepID=UPI000248FCE2
peptidase m15d vanx d-ala-d-ala dipeptidase
DolZOral124_scaffold_5912_9
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9119..9880)
DNA (762bp) protein (254aa)
hypothetical protein MsalJ2_02872 id=2813080 bin=GWF2_Bacteroidetes_49_14 species=Marinilabilia salmonicolor genus=Marinilabilia taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
hypothetical protein Tax=GWF2_Bacteroidetes_49_14_curated
hypothetical protein
DolZOral124_scaffold_5912_10
GWD2_Bacteroidetes_33_33_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(9907..10986)
DNA (1080bp) protein (360aa)
Putative uncharacterized protein id=2074878 bin=GWB2_Bacteroidetes_32_14 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWB2_Bacteroidetes_32_14 organism_group=Bacteroidetes organism_desc=a47
Putative uncharacterized protein Tax=GWD2_Bacteroidetes_33_33_curated
DolZOral124_scaffold_5912_11
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10991..11476)
DNA (486bp) protein (162aa)
ECF subfamily RNA polymerase sigma-24 subunit; K03088 RNA polymerase sigma-70 factor, ECF subfamily Tax=GWA2_Bacteroidetes_31_9b_curated
ECF subfamily RNA polymerase sigma-24 subunit id=3869747 bin=GWF2_Bacteroidetes_33_16 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_16 organism_group=Bacteroidetes organism_desc=Good
RNA polymerase subunit sigma-24
DolZOral124_scaffold_5912_12
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11758..12918
DNA (1161bp) protein (387aa)
hypothetical protein AnHS1_00090 id=4002092 bin=GWF2_Bacteroidetes_38_335 species=Thermophagus xiamenensis genus=Thermophagus taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
hypothetical protein Tax=GWF2_Bacteroidetes_38_335_curated
hypothetical protein
DolZOral124_scaffold_5912_13
Saccharicrinis fermentans, Saccharicrinis, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13035..13649
DNA (615bp) protein (205aa)
Transcriptional regulator, TetR family n=1 Tax=Tannerella forsythia (strain ATCC 43037 / JCM 10827 / FDC 338) RepID=G8UM39_TANFA
HTH-type transcriptional repressor FabR {ECO:0000313|EMBL:GAF04669.1}; TaxID=869213 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Marinilabiliaceae; Saccharicrinis.;" source="Saccharic
TetR family transcriptional regulator
DolZOral124_scaffold_5912_14
Spirochaeta smaragdinae, Spirochaeta, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

13860..15572
DNA (1713bp) protein (571aa)
Putative uncharacterized protein n=1 Tax=Spirochaeta smaragdinae (strain DSM 11293 / JCM 15392 / SEBR 4228) RepID=E1RAQ2_SPISS
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADK82420.1}; Flags: Precursor;; TaxID=573413 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Spirochaeta.;" source="Spirochaeta smaragdinae
Displaying 14 items

View Taxonomy