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DolZOral124_scaffold_6408

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_6408_1
unknown

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1..108
DNA (108bp) protein (36aa)

This feature has no annotations

DolZOral124_scaffold_6408_trna_2
unknown

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comp(502..576)
DNA (75bp)
transferRNA
DolZOral124_scaffold_6408_2
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(613..1002)
DNA (390bp) protein (130aa)
Uncharacterized protein {ECO:0000313|EMBL:KJR99779.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbaceae bacterium B
Transcriptional regulator, MerR family id=2284361 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
MerR family transcriptional regulator
DolZOral124_scaffold_6408_3
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1026..1319)
DNA (294bp) protein (98aa)
Integration host factor subunit alpha {ECO:0000313|EMBL:KJR99780.1}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;" source="Desulfobulbace
Related to integration host factor, alpha subunit id=2284359 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
integration host factor, alpha subunit
DolZOral124_scaffold_6408_4
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(1312..3756)
DNA (2445bp) protein (815aa)
Phenylalanine--tRNA ligase beta subunit {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00103829}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00283, ECO:0000256|SAAS:SAAS00022425};; Phenylalanyl-tR
Phenylalanine--tRNA ligase beta subunit n=1 Tax=uncultured bacterium RepID=K1YT32_9BACT
phenylalanyl-tRNA synthetase, beta chain
DolZOral124_scaffold_6408_5
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(3781..4791)
DNA (1011bp) protein (337aa)
Phenylalanine--tRNA ligase alpha subunit {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00016813}; EC=6.1.1.20 {ECO:0000256|HAMAP-Rule:MF_00281, ECO:0000256|SAAS:SAAS00089474};; Phenylalanyl-t
Phenylalanine--tRNA ligase alpha subunit n=1 Tax=uncultured bacterium RepID=K1YT53_9BACT
phenylalanyl-tRNA synthetase, alpha chain
DolZOral124_scaffold_6408_6
Desulfobulbaceae bacterium BRH_c16a, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists


comp(4982..5338)
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=RL20_DESPS
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=1629713 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae.;"
rplT; 50S ribosomal protein L20
DolZOral124_scaffold_6408_7
uncultured Desulfofustis sp. PB-SRB1, Desulfofustis, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5541..5738)
DNA (198bp) protein (66aa)
50S ribosomal protein L35 n=1 Tax=uncultured Desulfofustis sp. PB-SRB1 RepID=V4L432_9DELT
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1385624 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; D
ribosomal protein L35
DolZOral124_scaffold_6408_8
Desulfotalea psychrophila, Desulfotalea, Desulfobacterales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(5874..6206)
DNA (333bp) protein (111aa)
Probable translation initiation factor IF-3 n=1 Tax=Desulfotalea psychrophila (strain LSv54 / DSM 12343) RepID=Q6ANB8_DESPS
translation initiation factor IF-3
Probable translation initiation factor IF-3 {ECO:0000313|EMBL:CAG36156.1}; TaxID=177439 species="Bacteria; Proteobacteria; Deltaproteobacteria; Desulfobacterales; Desulfobulbaceae; Desulfotalea.;" sou
DolZOral124_scaffold_6408_9

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comp(6545..8482)
DNA (1938bp) protein (646aa)
Threonine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033}; EC=6.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00184, ECO:0000256|SAAS:SAAS00106033};; Threonyl-tRNA synthetase {ECO:000
threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine--tRNA ligase n=1 Tax=uncultured bacterium RepID=K1YT37_9BACT
DolZOral124_scaffold_6408_trna_1
unknown

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comp(8553..8624)
DNA (72bp)
transferRNA
DolZOral124_scaffold_6408_10

Not on your lists

comp(8839..9441)
DNA (603bp) protein (201aa)
Recombination protein RecR n=1 Tax=uncultured bacterium RepID=K1YT60_9BACT
Recombination protein RecR {ECO:0000256|HAMAP-Rule:MF_00017, ECO:0000256|SAAS:SAAS00012243}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DNA replication and repair protein RecR
DolZOral124_scaffold_6408_11
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(9449..9769)
DNA (321bp) protein (107aa)
Nucleoid-associated protein DP1429 id=2121040 bin=GWB2_Desulfobacterales_56_26 species=Desulfotalea psychrophila genus=Desulfotalea taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
hypothetical protein; K09747 hypothetical protein Tax=GWB2_Desulfobacterales_56_26_curated
hypothetical protein
DolZOral124_scaffold_6408_12
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9778..11580)
DNA (1803bp) protein (601aa)
DNA polymerase III, subunit gamma/tau (EC:2.7.7.7) Tax=GWB2_Desulfobacterales_56_26_curated
DNA polymerase III, subunit gamma/tau (EC:2.7.7.7)
DNA polymerase III, subunits gamma and tau id=2121039 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
DolZOral124_scaffold_6408_13
GWB2_Desulfobacterales_56_26_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12093..12866)
DNA (774bp) protein (258aa)
Putative uncharacterized protein id=1726858 bin=GWB2_Desulfobacterales_56_26 species=Desulfocapsa sulfexigens genus=Desulfocapsa taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWB2_Desulfobacterales_56_26 organism_group=Deltaproteobacteria organism_desc=Good
uncharacterized protein family (UPF0153) Tax=GWB2_Desulfobacterales_56_26_curated
uncharacterized protein family (UPF0153)
DolZOral124_scaffold_6408_14

Not on your lists

comp(13097..14377)
DNA (1281bp) protein (427aa)
Cationic amino acid transporter (Cat-2) n=1 Tax=Winogradskyella psychrotolerans RS-3 RepID=S7VPC4_9FLAO
amino acid transporter
Uncharacterized protein {ECO:0000313|EMBL:KKN78913.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
DolZOral124_scaffold_6408_15
unknown

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14688..14765
DNA (78bp) protein (26aa)

This feature has no annotations

Displaying 17 items

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