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DolZOral124_scaffold_14555

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DolZOral124_scaffold_14555_1
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3..698)
DNA (696bp) protein (232aa)
DNA-directed RNA polymerase subunit alpha; K03040 DNA-directed RNA polymerase subunit alpha [EC:2.7.7.6] Tax=GWF2_Bacteroidetes_38_335_curated
DNA-directed RNA polymerase subunit alpha id=4204597 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
DNA-directed RNA polymerase subunit alpha
DolZOral124_scaffold_14555_2
Parabacteroides merdae, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(710..1318)
DNA (609bp) protein (203aa)
30S ribosomal protein S4 n=4 Tax=Parabacteroides RepID=A7AJZ3_9PORP
rpsD; 30S ribosomal protein S4
30S ribosomal protein S4 {ECO:0000256|HAMAP-Rule:MF_01306}; TaxID=411477 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides me
DolZOral124_scaffold_14555_3
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(1340..1729)
DNA (390bp) protein (130aa)
30S ribosomal protein S11 id=4204595 bin=GWF2_Bacteroidetes_38_335 species=Bacteroidetes oral taxon 274 genus=unknown taxon_order=unknown taxon_class=unknown phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
rpsK; 30S ribosomal protein S11; K02948 small subunit ribosomal protein S11 Tax=GWF2_Bacteroidetes_38_335_curated
30S ribosomal protein S11
DolZOral124_scaffold_14555_4
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(1740..2117)
DNA (378bp) protein (126aa)
30S ribosomal protein S13 id=4204594 bin=GWF2_Bacteroidetes_38_335 species=Tannerella forsythia genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
rpsM; 30S ribosomal protein S13; K02952 small subunit ribosomal protein S13 Tax=GWF2_Bacteroidetes_38_335_curated
30S ribosomal protein S13
DolZOral124_scaffold_14555_5
Porphyromonas crevioricanis, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(2158..2274)
DNA (117bp) protein (39aa)
50S ribosomal protein L36 n=2 Tax=Porphyromonas RepID=S4PLY2_9PORP
50S ribosomal protein L36
50S ribosomal protein L36 {ECO:0000256|HAMAP-Rule:MF_00251, ECO:0000256|RuleBase:RU000571}; TaxID=1305618 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromona
DolZOral124_scaffold_14555_6

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comp(2286..2504)
DNA (219bp) protein (73aa)
Translation initiation factor IF-1 n=3 Tax=Odoribacter RepID=H1DK87_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KKL24448.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Translation initiation factor IF-1
DolZOral124_scaffold_14555_7
GWF2_Bacteroidetes_33_38_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2511..3290)
DNA (780bp) protein (260aa)
methionine aminopeptidase, type I (EC:3.4.11.18); K01265 methionyl aminopeptidase [EC:3.4.11.18] Tax=GWF2_Bacteroidetes_33_38_curated
methionine aminopeptidase (EC:3.4.11.18)
Methionine aminopeptidase id=2934270 bin=GWF2_Bacteroidetes_33_38 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_33_38 organism_group=Bacteroidetes organism_desc=a699 rbh
DolZOral124_scaffold_14555_8
GWA2_Bacteroidetes_32_17_curated, Bacteroidia, Bacteroidetes, Bacteria

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comp(3323..4657)
DNA (1335bp) protein (445aa)
preprotein translocase subunit SecY id=4782001 bin=GWA2_Bacteroidetes_32_17 species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWA2_Bacteroidetes_32_17 organism_group=Bacteroidetes rbh
preprotein translocase, SecY subunit; K03076 preprotein translocase subunit SecY Tax=GWA2_Bacteroidetes_32_17_curated
preprotein translocase, SecY subunit
DolZOral124_scaffold_14555_9
BJP_IG2102_Bacteroidetes_40_9, Bacteroidetes, Bacteria

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comp(4669..5115)
DNA (447bp) protein (149aa)
50S ribosomal protein L15 id=3650313 bin=GWC2_Bacteroidetes_40_22 species=Tannerella sp. 6_1_58FAA_CT1 genus=Tannerella taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWC2_Bacteroidetes_40_22 organism_group=Bacteroidetes
50S ribosomal protein L15
Tax=BJP_IG2102_Bacteroidetes_40_9
DolZOral124_scaffold_14555_10
Aquimarina atlantica, Aquimarina, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(5127..5306)
DNA (180bp) protein (60aa)
50S ribosomal protein L30 n=1 Tax=Anaerophaga thermohalophila RepID=UPI000237D170
50S ribosomal protein L30 {ECO:0000256|HAMAP-Rule:MF_01371, ECO:0000256|SAAS:SAAS00032272}; TaxID=1317122 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Aquimar
50S ribosomal protein L30
DolZOral124_scaffold_14555_11
GWF2_Bacteroidetes_49_14_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5320..5832)
DNA (513bp) protein (171aa)
30S ribosomal protein S5 id=4377365 bin=GWF2_Bacteroidetes_49_14 species=Paludibacter propionicigenes genus=Paludibacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_49_14 organism_group=Bacteroidetes organism_desc=Good (not ab)
30S ribosomal protein S5; K02988 small subunit ribosomal protein S5 Tax=GWF2_Bacteroidetes_49_14_curated
30S ribosomal protein S5
DolZOral124_scaffold_14555_12
Sanguibacteroides justesenii, Sanguibacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(5845..6207)
DNA (363bp) protein (121aa)
50S ribosomal protein L18 n=1 Tax=Butyricimonas synergistica RepID=UPI00036A0B65
50S ribosomal protein L18 {ECO:0000256|HAMAP-Rule:MF_01337, ECO:0000313|EMBL:KIO42790.1}; TaxID=1547597 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Sanguibacteroi
50S ribosomal protein L18
DolZOral124_scaffold_14555_13
Mangrovimonas yunxiaonensis, Mangrovimonas, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6227..6775)
DNA (549bp) protein (183aa)
50S ribosomal protein L6 n=1 Tax=Alistipes indistinctus YIT 12060 RepID=G5H560_9BACT
50S ribosomal protein L6 {ECO:0000256|HAMAP-Rule:MF_01365, ECO:0000256|RuleBase:RU003870}; TaxID=1197477 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Mangrovi
50S ribosomal protein L6
DolZOral124_scaffold_14555_14
Sphingobacterium sp. ACCC 05744, Sphingobacterium, Sphingobacteriales, Sphingobacteriia, Bacteroidetes, Bacteria

Not on your lists


comp(6785..7180)
DNA (396bp) protein (132aa)
30S ribosomal protein S8 n=1 Tax=Sphingobacterium paucimobilis HER1398 RepID=U2HSR3_9SPHI
30S ribosomal protein S8 {ECO:0000256|HAMAP-Rule:MF_01302}; TaxID=1229276 species="Bacteria; Bacteroidetes; Sphingobacteriia; Sphingobacteriales; Sphingobacteriaceae; Sphingobacterium.;" source="Sphin
30S ribosomal protein S8
DolZOral124_scaffold_14555_15
Odoribacter splanchnicus CAG:14, Odoribacter, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7199..7468)
DNA (270bp) protein (90aa)
30S ribosomal protein S14 n=2 Tax=Odoribacter RepID=F9ZB01_ODOSD
30S ribosomal protein S14
30S ribosomal protein S14 {ECO:0000256|HAMAP-Rule:MF_00537}; TaxID=1263090 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Odoribacter; environmental samples.;" sourc
DolZOral124_scaffold_14555_16
GWF2_Bacteroidetes_38_335_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(7472..8029)
DNA (558bp) protein (186aa)
50S ribosomal protein L5 id=4204582 bin=GWF2_Bacteroidetes_38_335 species=unknown genus=unknown taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
rplE; 50S ribosomal protein L5; K02931 large subunit ribosomal protein L5 Tax=GWF2_Bacteroidetes_38_335_curated
50S ribosomal protein L5
DolZOral124_scaffold_14555_17
GWA2_Bacteroidetes_31_9b_curated, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(8029..8253)
DNA (225bp) protein (75aa)
ribosomal protein L24; K02895 large subunit ribosomal protein L24 Tax=GWA2_Bacteroidetes_31_9b_curated
50S ribosomal protein L24 id=2106141 bin=GWD2_Bacteroidetes_33_33 species=Odoribacter laneus genus=Odoribacter taxon_order=Bacteroidales taxon_class=Bacteroidia phylum=Bacteroidetes tax=GWD2_Bacteroidetes_33_33 organism_group=Bacteroidetes organism_desc=a152
50S ribosomal protein L24
Displaying 17 items

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