ggKbase home page

DORA_ECA_1575

Alias: I4.NODE_477_length_21671_cov_116.603249

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DORA_ECA_1575_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..347
DNA (345bp) protein (115aa)
rluE; ribosomal large subunit pseudouridine synthase E (rRNA pseudouridylate synthase E) (EC:5.4.99.-)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=749532 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
Ribosomal large subunit pseudouridine synthase E
DORA_ECA_1575_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

357..818
DNA (462bp) protein (154aa)
Phosphatase nudJ
Phosphatase nudJ {ECO:0000313|EMBL:ELE56729.1}; TaxID=1182682 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE
Phosphatase nudJ
DORA_ECA_1575_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

872..1978
DNA (1107bp) protein (369aa)
tRNA-specific 2-thiouridylase MnmA {ECO:0000256|HAMAP-Rule:MF_00144}; EC=2.8.1.- {ECO:0000256|HAMAP-Rule:MF_00144};; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteri
mnmA; tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase (EC:2.1.1.61)
tRNA-specific 2-thiouridylase MnmA
DORA_ECA_1575_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2014..2655
DNA (642bp) protein (214aa)
hypothetical protein
High frequency lysogenization protein HflD {ECO:0000256|HAMAP-Rule:MF_00695}; TaxID=1269007 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;
High frequency lysogenization protein HflD
DORA_ECA_1575_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2659..4029
DNA (1371bp) protein (457aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase {ECO:0000256|RuleBase:RU361172}; Short=ASL {ECO:0000256|RuleBase:RU361172};; EC=4.3.2.2 {ECO:0000256|RuleBase:RU361172};; Adenylosuccinase {ECO:0000256|RuleBase:RU361172}; TaxID
Adenylosuccinate lyase
DORA_ECA_1575_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4199..4870
DNA (672bp) protein (224aa)
phoP; DNA-binding transcriptional regulator PhoP
Virulence transcriptional regulatory protein phoP {ECO:0000313|EMBL:EQO00658.1}; TaxID=1280976 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichi
Virulence transcriptional regulatory protein phoP
DORA_ECA_1575_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4870..6330
DNA (1461bp) protein (487aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1446580 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
integral membrane sensor signal transduction histidine kinase
Sensor protein PhoQ
DORA_ECA_1575_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6406..7527
DNA (1122bp) protein (374aa)
ycfD; cytoplasmic protein
Cupin superfamily protein {ECO:0000313|EMBL:EHX33664.1}; TaxID=868191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
Uncharacterized protein ycfD
DORA_ECA_1575_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7576..8802)
DNA (1227bp) protein (409aa)
Peptidase T {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064331}; EC=3.4.11.4 {ECO:0000256|HAMAP-Rule:MF_00550, ECO:0000256|SAAS:SAAS00064282};; Aminotripeptidase {ECO:0000256|HAMAP-Rule:M
pepT; peptidase T (EC:3.4.11.4)
Peptidase T
DORA_ECA_1575_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9052..10188
DNA (1137bp) protein (379aa)
potA; spermidine/putrescine ABC transporter (EC:3.6.3.31)
Spermidine/putrescine import ATP-binding protein PotA {ECO:0000256|HAMAP-Rule:MF_01726}; EC=3.6.3.31 {ECO:0000256|HAMAP-Rule:MF_01726};; TaxID=1444153 species="Bacteria; Proteobacteria; Gammaproteobac
Spermidine/putrescine import ATP-binding protein PotA
DORA_ECA_1575_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10172..11029
DNA (858bp) protein (286aa)
potB; spermidine/putrescine ABC transporter permease PotB
Spermidine/putrescine ABC transporter membrane protein {ECO:0000313|EMBL:EFK51663.1}; TaxID=679207 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
Spermidine/putrescine transport system permease protein PotB
DORA_ECA_1575_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11026..11820
DNA (795bp) protein (265aa)
potC; Spermidine Putrescine ABC transporter permease
Binding--dependent transport system inner membrane component family protein {ECO:0000313|EMBL:KEO02779.1}; TaxID=1444219 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Ente
Spermidine/putrescine transport system permease protein PotC
DORA_ECA_1575_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11817..12863
DNA (1047bp) protein (349aa)
potD; spermidine/putrescine ABC transporter substrate-binding protein
Putrescine-binding periplasmic protein {ECO:0000256|PIRNR:PIRNR019574}; TaxID=869686 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sourc
Spermidine/putrescine-binding periplasmic protein
DORA_ECA_1575_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12921..13382
DNA (462bp) protein (154aa)
Inner membrane protein ymfA {ECO:0000313|EMBL:ETJ23063.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
ymfA; hypothetical protein
Inner membrane protein ymfA
DORA_ECA_1575_15
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13379..14164
DNA (786bp) protein (262aa)
Inner membrane protein ycfZ {ECO:0000313|EMBL:ETJ23064.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
hypothetical protein
Inner membrane protein ycfZ
DORA_ECA_1575_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14044..14283)
DNA (240bp) protein (80aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ23065.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Putative uncharacterized protein
DORA_ECA_1575_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14302..15123)
DNA (822bp) protein (274aa)
NAD-dependent protein deacylase {ECO:0000256|HAMAP-Rule:MF_01121}; EC=3.5.1.- {ECO:0000256|HAMAP-Rule:MF_01121};; Regulatory protein SIR2 homolog {ECO:0000256|HAMAP-Rule:MF_01121}; TaxID=1403943 speci
cobB; NAD-dependent deacetylase
DORA_ECA_1575_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15139..16050)
DNA (912bp) protein (304aa)
N-acetyl-D-glucosamine kinase {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012116}; EC=2.7.1.59 {ECO:0000256|HAMAP-Rule:MF_01271, ECO:0000256|SAAS:SAAS00012130};; GlcNAc kinase {ECO:000025
ROK family protein
N-acetyl-D-glucosamine kinase
DORA_ECA_1575_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16079..17317)
DNA (1239bp) protein (413aa)
outer membrane-specific lipoprotein transporter subunit LolE
Lipoprotein-releasing system transmembrane protein lolE {ECO:0000313|EMBL:EQX89359.1}; TaxID=1281213 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
Lipoprotein-releasing system transmembrane protein LolE
DORA_ECA_1575_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17323..18024)
DNA (702bp) protein (234aa)
Lipoprotein-releasing system ATP-binding protein LolD {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041694}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01708, ECO:0000256|SAAS:SAAS00041671};; Ta
lolD; lipoprotein transporter ATP-binding subunit
Lipoprotein-releasing system ATP-binding protein LolD
DORA_ECA_1575_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18017..19216)
DNA (1200bp) protein (400aa)
Lipoprotein-releasing system transmembrane protein LolC {ECO:0000313|EMBL:ETJ23070.1}; TaxID=1403943 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esch
outer membrane-specific lipoprotein transporter subunit LolC
Lipoprotein-releasing system transmembrane protein LolC
DORA_ECA_1575_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20182..20631
DNA (450bp) protein (150aa)
ycfT; hypothetical protein
Inner membrane protein YcfT {ECO:0000313|EMBL:KDW72570.1}; TaxID=1444053 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
Inner membrane protein YcfT
DORA_ECA_1575_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20711..21550
DNA (840bp) protein (280aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1127356 species="Bacteria; P
mfd; transcription-repair coupling factor
Transcription-repair-coupling factor
Displaying 23 items

View Taxonomy