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DORA_UNB_89630

Alias: I1.NODE_493_length_12601_cov_275.265045.6.12689

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Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DORA_UNB_89630_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3..383)
DNA (381bp) protein (127aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal pep
lspA; lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase
DORA_UNB_89630_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(383..3199)
DNA (2817bp) protein (939aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0
ileS; Isoleucyl-tRNA synthetase (EC:6.1.1.5) rbh
Isoleucine--tRNA ligase
DORA_UNB_89630_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(3242..4183)
DNA (942bp) protein (314aa)
ribF; riboflavin biosynthesis protein RibF (EC:2.7.1.26 2.7.7.2)
Riboflavin biosynthesis protein {ECO:0000256|PIRNR:PIRNR004491}; EC=2.7.1.26 {ECO:0000256|PIRNR:PIRNR004491};; EC=2.7.7.2 {ECO:0000256|PIRNR:PIRNR004491};; TaxID=1281269 species="Bacteria; Proteobacte
Riboflavin biosynthesis protein RibF
DORA_UNB_89630_4
Escherichia fergusonii, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4512..4775
DNA (264bp) protein (88aa)
rpsT; 30S ribosomal protein S20
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=564 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
30S ribosomal protein S20
DORA_UNB_89630_5

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5260..6681
DNA (1422bp) protein (474aa)
Non-LEE-encoded type III secreted effector {ECO:0000313|EMBL:ETJ18010.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
Non-LEE-encoded type III secreted effector
DORA_UNB_89630_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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6983..7516
DNA (534bp) protein (178aa)
Fimbrial family protein {ECO:0000313|EMBL:KEJ70583.1}; TaxID=1444102 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
putative fimbrial-like protein
Fimbrial protein
DORA_UNB_89630_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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7566..8249
DNA (684bp) protein (228aa)
Putative fimbrial chaperone yehC {ECO:0000313|EMBL:EGP26602.1}; TaxID=1001989 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
putative membrane-associated pilin chaperone
Gram-negative pilus assembly chaperone
DORA_UNB_89630_8

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8262..10712
DNA (2451bp) protein (817aa)
Fimbrial usher protein {ECO:0000313|EMBL:ETJ18013.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
putative fimbrial biogenesis outer membrane usher protein
Fimbrial usher protein
DORA_UNB_89630_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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10725..11684
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:KEL65392.1}; TaxID=1444047 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
Predicted protein
DORA_UNB_89630_10
Shigella dysenteriae, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11722..12618)
DNA (897bp) protein (299aa)
nhaR; transcriptional activator NhaR
Transcriptional activator NhaR {ECO:0000313|EMBL:EFW49268.1}; TaxID=941429 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella d
Transcriptional activator protein nhaR
Displaying 10 items

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