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DORA_UNB_89567

Alias: I12.NODE_9904_length_39036_cov_19.833614

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Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
DORA_UNB_89567_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(134..619)
DNA (486bp) protein (162aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59884.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
DORA_UNB_89567_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

784..963
DNA (180bp) protein (60aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW54553.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
DORA_UNB_89567_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1027..1692)
DNA (666bp) protein (222aa)
DNA repair protein RadC
UPF0758 protein SE_1336; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 12228).;"
UPF0758 protein SE_1336
DORA_UNB_89567_4

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comp(1704..2414)
DNA (711bp) protein (237aa)
Late competence protein ComC, processing protease
A24 family peptidase {ECO:0000313|EMBL:ETJ18379.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
A24 family peptidase
DORA_UNB_89567_5

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comp(2598..3863)
DNA (1266bp) protein (422aa)
folC; bifunctional FolC family protein
Folylpolyglutamate synthase/dihydrofolate synthase {ECO:0000313|EMBL:ETJ18380.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Folylpolyglutamate synthase/dihydrofolate synthase
DORA_UNB_89567_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(3874..6504)
DNA (2631bp) protein (877aa)
Valyl-tRNA synthetase (EC:6.1.1.9)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
Valine--tRNA ligase
DORA_UNB_89567_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6808..7407
DNA (600bp) protein (200aa)
DNA-3-methyladenine glycosylase I {ECO:0000313|EMBL:EFE59878.1}; EC=3.2.2.20 {ECO:0000313|EMBL:EFE59878.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="
DNA-3-methyladenine glycosylase (EC:3.2.2.20)
DNA-3-methyladenine glycosylase I
DORA_UNB_89567_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7574..8593)
DNA (1020bp) protein (340aa)
hypothetical protein
Putative membrane protein AbrB {ECO:0000313|EMBL:EFE59877.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Membrane protein AbrB
DORA_UNB_89567_9

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comp(9087..10373)
DNA (1287bp) protein (429aa)
Glutamate-1-semialdehyde aminotransferase (EC:5.4.3.8)
Glutamate-1-semialdehyde 2,1-aminomutase 1 {ECO:0000313|EMBL:ETJ18384.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Glutamate-1-semialdehyde 2,1-aminomutase 1
DORA_UNB_89567_10

Not on your lists

comp(10394..11368)
DNA (975bp) protein (325aa)
hemB; delta-aminolevulinic acid dehydratase (EC:4.2.1.24)
Delta-aminolevulinic acid dehydratase {ECO:0000313|EMBL:ETJ18385.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Delta-aminolevulinic acid dehydratase
DORA_UNB_89567_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11358..12038)
DNA (681bp) protein (227aa)
Uroporphyrinogen-III synthase (EC:4.2.1.75)
Uroporphyrinogen-III synthase {ECO:0000313|EMBL:AAW54584.1}; EC=4.2.1.75 {ECO:0000313|EMBL:AAW54584.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Stap
Uroporphyrinogen-III synthase
DORA_UNB_89567_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12072..12998)
DNA (927bp) protein (309aa)
Porphobilinogen deaminase (EC:2.5.1.61)
Porphobilinogen deaminase {ECO:0000256|HAMAP-Rule:MF_00260}; Short=PBG {ECO:0000256|HAMAP-Rule:MF_00260};; EC=2.5.1.61 {ECO:0000256|HAMAP-Rule:MF_00260};; Hydroxymethylbilane synthase {ECO:0000256|HAM
Porphobilinogen deaminase
DORA_UNB_89567_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(13052..13864)
DNA (813bp) protein (271aa)
HemX protein, negative effector of steady-state concentration of glutamyl-tRNA reductase
Cytochrome c assembly protein {ECO:0000313|EMBL:EFE59872.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Cytochrome c assembly protein
DORA_UNB_89567_14

Not on your lists

comp(13886..15232)
DNA (1347bp) protein (449aa)
Glutamyl-tRNA reductase (EC:1.2.1.70)
Glutamyl-tRNA reductase {ECO:0000313|EMBL:ETJ18389.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Glutamyl-tRNA reductase
DORA_UNB_89567_15

Not on your lists

comp(15402..15989)
DNA (588bp) protein (196aa)
Putative GTP-binding protein EngB {ECO:0000313|EMBL:ETJ18390.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
GTP-binding protein EngB
Probable GTP-binding protein EngB
DORA_UNB_89567_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16101..17363)
DNA (1263bp) protein (421aa)
clpX; ATP-dependent protease ATP-binding subunit ClpX
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
DORA_UNB_89567_17

Not on your lists

comp(17650..18951)
DNA (1302bp) protein (434aa)
Cell division trigger factor (EC:5.2.1.8)
Trigger factor {ECO:0000313|EMBL:ETJ18392.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Trigger factor
DORA_UNB_89567_18

Not on your lists

comp(19112..20035)
DNA (924bp) protein (308aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ18393.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
DORA_UNB_89567_19
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20052..20663)
DNA (612bp) protein (204aa)
NUDIX domain protein
Hydrolase, NUDIX family {ECO:0000313|EMBL:EFE59866.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
MutT/nudix family hydrolase
DORA_UNB_89567_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(21081..21437)
DNA (357bp) protein (119aa)
LSU ribosomal protein L20p
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
50S ribosomal protein L20
DORA_UNB_89567_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists


comp(21489..21689)
DNA (201bp) protein (67aa)
LSU ribosomal protein L35p
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus ep
50S ribosomal protein L35
DORA_UNB_89567_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(21717..22244)
DNA (528bp) protein (176aa)
Translation initiation factor 3
Translation initiation factor IF-3 {ECO:0000256|HAMAP-Rule:MF_00080, ECO:0000256|RuleBase:RU000646}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylo
Translation initiation factor IF-3
DORA_UNB_89567_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22452..23954)
DNA (1503bp) protein (501aa)
Lysine-specific permease
Amino acid permease family protein {ECO:0000313|EMBL:AAW54610.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 359
APC family amino acid-polyamine-organocation transporter
DORA_UNB_89567_24

Not on your lists

comp(24383..24568)
DNA (186bp) protein (62aa)
Threonyl-tRNA synthetase (EC:6.1.1.3)
Threonine-tRNA ligase {ECO:0000313|EMBL:ETJ18399.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Threonine--tRNA ligase
DORA_UNB_89567_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26704..27624)
DNA (921bp) protein (307aa)
Helicase loader DnaI
Primosomal protein DnaI {ECO:0000313|EMBL:AAW54612.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Primosomal protein DnaI
DORA_UNB_89567_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27624..28994)
DNA (1371bp) protein (457aa)
Helicase loader DnaB
Replication initiation and membrane attachment protein, DnaB/DnaD family {ECO:0000313|EMBL:EFE59859.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staph
Replication initiation and membrane attachment protein
DORA_UNB_89567_27

Not on your lists

comp(29017..29463)
DNA (447bp) protein (149aa)
Transcriptional repressor NrdR {ECO:0000313|EMBL:ETJ18402.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Ribonucleotide reductase transcriptional regulator NrdR
Transcriptional repressor NrdR
DORA_UNB_89567_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(29983..31008)
DNA (1026bp) protein (342aa)
Glyceraldehyde-3-phosphate dehydrogenase 2; Short=GAPDH 2;; EC=1.2.1.12;; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain
gap; glyceraldehyde-3-phosphate dehydrogenase, type I
Glyceraldehyde-3-phosphate dehydrogenase 2
DORA_UNB_89567_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(31878..32489)
DNA (612bp) protein (204aa)
Dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=525375 species="Bacteria; Fi
Dephospho-CoA kinase
DORA_UNB_89567_30
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(32505..33377)
DNA (873bp) protein (291aa)
Formamidopyrimidine-DNA glycosylase (EC:3.2.2.23)
Formamidopyrimidine-DNA glycosylase {ECO:0000256|SAAS:SAAS00020852}; EC=3.2.2.- {ECO:0000256|SAAS:SAAS00275239};; EC=3.2.2.23 {ECO:0000256|SAAS:SAAS00020832};; EC=4.2.99.18 {ECO:0000256|SAAS:SAAS00054
Possible DNA-(Apurinic or apyrimidinic site) lyase
Displaying items 1-30 of 33 in total

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