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GW2011_AR15_1

Alias: AR15_final_v5

Search features with annotation key words

Displaying items 1-30 of 1332 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs functional annotations notes
GW2011_AR15_1_1
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

2..589
-----------------
DNA (588bp)
protein (196aa)
seg (db=Seg db_id=seg from=35 to=43)
GW2011_AR15_1_2
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(812..1147)
-----------------
DNA (336bp)
protein (112aa)
Protein of unknown function UPF0060
UPF0060 membrane protein Mpet_2032 n=1 Tax=Methanoplanus petrolearius (strain DSM 11571 / OCM 486 / SEBR 4847) RepID=E1RJH4_METP4
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=27)
seg (db=Seg db_id=seg from=4 to=24)
GW2011_AR15_1_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1132..1500)
-----------------
DNA (369bp)
protein (123aa)
conserved membrane protein of unknown function
UPF0060 membrane protein Nmar_1681 n=2 Tax=Nitrosopumilus RepID=A9A2Q0_NITMS
seg (db=Seg db_id=seg from=41 to=55)
transmembrane_regions (db=TMHMM db_id=tmhmm from=12 to=34)
GW2011_AR15_1_4
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2283..2531)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein n=1 Tax=Methanofollis liminatans DSM 4140 RepID=J1L150_9EURY
hypothetical protein
RelE-like (db=superfamily db_id=SSF143011 from=1 to=81 evalue=1.6e-07)
(db=HMMPfam db_id=PF05016 from=10 to=81 evalue=2.1e-06 interpro_id=IPR007712 interpro_description=Plasmid stabilisation system)
GW2011_AR15_1_5
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2525..2794)
-----------------
DNA (270bp)
protein (90aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos1D1 RepID=Q64CM2_9ARCH
AbrB family transcriptional regulator
coiled-coil (db=Coil db_id=coil from=42 to=63 evalue=NA)
lp_hng_hel_AbrB: transcriptional regu (db=HMMTigr db_id=TIGR01439 from=6 to=46 evalue=3.8e-08 interpro_id=IPR006339 interpro_description=Transcription regulator AbrB)
GW2011_AR15_1_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3014..3430
-----------------
DNA (417bp)
protein (139aa)
PIN domain-like (db=superfamily db_id=SSF88723 from=1 to=125 evalue=1.7e-11)
(db=HMMPfam db_id=PF01850 from=5 to=128 evalue=3.7e-09 interpro_id=IPR002716 interpro_description=PilT protein, N-terminal)
no description (db=HMMSmart db_id=SM00670 from=3 to=124 evalue=0.0051 interpro_id=IPR006596 interpro_description=Nucleotide binding protein, PINc)
GW2011_AR15_1_7
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3423..3683)
-----------------
DNA (261bp)
protein (87aa)
Ribbon-helix-helix (db=superfamily db_id=SSF47598 from=3 to=50 evalue=6.9e-10 interpro_id=IPR010985 interpro_description=Ribbon-helix-helix GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
(db=HMMPfam db_id=PF01402 from=6 to=43 evalue=1.7e-05 interpro_id=IPR002145 interpro_description=CopG-like DNA-binding GO=Molecular Function: DNA binding (GO:0003677), Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
no description (db=Gene3D db_id=G3DSA:1.10.1220.10 from=3 to=48 evalue=0.00013 interpro_id=IPR013321 interpro_description=Arc-type ribbon-helix-helix GO=Biological Process: regulation of transcription, DNA-dependent (GO:0006355))
GW2011_AR15_1_8
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3943..4536)
-----------------
DNA (594bp)
protein (198aa)
SAM-dependent methyltransferase, type 11
SAM-dependent methyltransferase, type 11 n=1 Tax=Pelobacter carbinolicus (strain DSM 2380 / Gra Bd 1) RepID=Q3A476_PELCD
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=197 evalue=1.0e-28)
no description (db=Gene3D db_id=G3DSA:3.40.50.150 from=22 to=139 evalue=2.7e-21)
GW2011_AR15_1_9
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4770..4892)
-----------------
DNA (123bp)
protein (41aa)
coiled-coil (db=Coil db_id=coil from=13 to=34 evalue=NA)
GW2011_AR15_1_10
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4864..5262)
-----------------
DNA (399bp)
protein (133aa)
Death on curing protein, Doc toxin
Phage protein n=6 Tax=Staphylococcus RepID=D1GQ90_STAA0
DOC_P1: death-on-curing family protein (db=HMMTigr db_id=TIGR01550 from=9 to=124 evalue=4.3e-07 interpro_id=IPR006440 interpro_description=Addiction module killer protein Doc)
(db=HMMPfam db_id=PF02661 from=42 to=85 evalue=1.1e-06 interpro_id=IPR003812 interpro_description=Filamentation induced by cAMP/death on curing-related)
GW2011_AR15_1_11

Not on your lists

5501..6232
-----------------
DNA (732bp)
protein (244aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CZJ3_9BACT
hypothetical protein
transmembrane_regions (db=TMHMM db_id=tmhmm from=7 to=29)
seg (db=Seg db_id=seg from=2 to=15)
GW2011_AR15_1_12
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

6478..7737
-----------------
DNA (1260bp)
protein (420aa)
Adenylosuccinate synthetase n=1 Tax=Caloramator australicus RC3 RepID=G0V3T9_9CLOT rbh
purA; adenylosuccinate synthetase (EC:6.3.4.4)
ADENYLOSUCCIN_SYN_2 (db=PatternScan db_id=PS00513 from=123 to=134 evalue=0.0 interpro_id=IPR018220 interpro_description=Adenylosuccinate synthase, active site GO=Molecular Function: adenylosuccinate synthase activity (GO:0004019), Molecular Function: GTP binding (GO:0005525), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
no description (db=HMMSmart db_id=SM00788 from=1 to=410 evalue=1.5e-231 interpro_id=IPR001114 interpro_description=Adenylosuccinate synthetase GO=Molecular Function: magnesium ion binding (GO:0000287), Molecular Function: adenylosuccinate synthase activity (GO:0004019), Molecular Function: GTP binding (GO:0005525), Cellular Component: cytoplasm (GO:0005737), Biological Process: purine nucleotide biosynthetic process (GO:0006164))
GW2011_AR15_1_13

Not on your lists

7762..9057
-----------------
DNA (1296bp)
protein (432aa)
purB; adenylosuccinate lyase (EC:4.3.2.2)
Adenylosuccinate lyase n=3 Tax=Legionella longbeachae RepID=D3HJ61_LEGLN rbh
seg (db=Seg db_id=seg from=127 to=140)
FUMARATE_LYASES (db=PatternScan db_id=PS00163 from=273 to=282 evalue=0.0 interpro_id=IPR020557 interpro_description=Fumarate lyase, conserved site GO=Molecular Function: catalytic activity (GO:0003824))
GW2011_AR15_1_14
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(9046..10212)
-----------------
DNA (1167bp)
protein (389aa)
GW2011_AR15_1_15
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10245..11681)
-----------------
DNA (1437bp)
protein (479aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG rbh
IMP_DH_GMP_RED (db=PatternScan db_id=PS00487 from=297 to=309 evalue=0.0 interpro_id=IPR015875 interpro_description=IMP dehydrogenase / GMP reductase, conserved site GO=Molecular Function: oxidoreductase activity (GO:0016491), Biological Process: oxidation-reduction process (GO:0055114))
Inosine-5'-monophosphate dehydrogenase (db=HMMPIR db_id=PIRSF000130 from=1 to=476 evalue=4.8e-244 interpro_id=IPR018529 interpro_description=IMP dehydrogenase-related GO=Molecular Function: IMP dehydrogenase activity (GO:0003938), Biological Process: oxidation-reduction process (GO:0055114))
GW2011_AR15_1_16
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11699..12238)
-----------------
DNA (540bp)
protein (180aa)
cytidylate kinase (EC:2.7.4.14)
Cytidylate kinase n=1 Tax=Vulcanisaeta distributa (strain DSM 14429 / JCM 11212 / NBRC 100878 / IC-017) RepID=E1QNF2_VULDI
cyt_kin_arch: putative cytidylate kinase (db=HMMTigr db_id=TIGR02173 from=1 to=174 evalue=2.3e-34 interpro_id=IPR011892 interpro_description=Cytidylate kinase, putative GO=Molecular Function: cytidylate kinase activity (GO:0004127), Molecular Function: ATP binding (GO:0005524), Biological Process: nucleobase-containing compound metabolic process (GO:0006139))
P-loop containing nucleoside triphosphate hydrolases (db=superfamily db_id=SSF52540 from=1 to=176 evalue=1.9e-23)
GW2011_AR15_1_17
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12264..13976)
-----------------
DNA (1713bp)
protein (571aa)
sodium/hydrogen exchanger
Transporter, CPA2 family n=4 Tax=Methanococcus maripaludis RepID=A4FZ11_METM5 rbh
transmembrane_regions (db=TMHMM db_id=tmhmm from=5 to=24)
seg (db=Seg db_id=seg from=55 to=71)
GW2011_AR15_1_18
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14022..14621)
-----------------
DNA (600bp)
protein (200aa)
seg (db=Seg db_id=seg from=14 to=27)
GW2011_AR15_1_19
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

14711..15016
-----------------
DNA (306bp)
protein (102aa)
Large-conductance mechanosensitive channel
Large-conductance mechanosensitive channel n=1 Tax=Methanolinea tarda NOBI-1 RepID=G6FKW3_9EURY
transmembrane_regions (db=TMHMM db_id=tmhmm from=15 to=37)
(db=HMMPfam db_id=PF01741 from=3 to=96 evalue=1.1e-19 interpro_id=IPR001185 interpro_description=Large-conductance mechanosensitive channel GO=Molecular Function: ion channel activity (GO:0005216), Biological Process: transport (GO:0006810), Cellular Component: integral to membrane (GO:0016021))
GW2011_AR15_1_20
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15018..15500)
-----------------
DNA (483bp)
protein (161aa)
Demethylmenaquinone methyltransferase n=1 Tax=Cesiribacter andamanensis AMV16 RepID=M7NYZ8_9BACT
SAM-dependent methyltransferase
coiled-coil (db=Coil db_id=coil from=133 to=154 evalue=NA)
S-adenosyl-L-methionine-dependent methyltransferases (db=superfamily db_id=SSF53335 from=1 to=119 evalue=9.6e-29)
GW2011_AR15_1_21
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

15541..16335
-----------------
DNA (795bp)
protein (265aa)
seg (db=Seg db_id=seg from=28 to=42)
PLP-dependent transferases (db=superfamily db_id=SSF53383 from=3 to=183 evalue=6.0e-11 interpro_id=IPR015424 interpro_description=Pyridoxal phosphate-dependent transferase, major domain)
GW2011_AR15_1_22
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

16378..16737
-----------------
DNA (360bp)
protein (120aa)
Uncharacterized protein n=1 Tax=uncultured bacterium (gcode 4) RepID=K2FBI0_9BACT
hypothetical protein
seg (db=Seg db_id=seg from=27 to=48)
GW2011_AR15_1_23
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

16787..17260
-----------------
DNA (474bp)
protein (158aa)
seg (db=Seg db_id=seg from=14 to=25)
GW2011_AR15_1_24
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(17278..18030)
-----------------
DNA (753bp)
protein (251aa)
seg (db=Seg db_id=seg from=177 to=190)
coiled-coil (db=Coil db_id=coil from=171 to=199 evalue=NA)
GW2011_AR15_1_25
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

18265..18651
-----------------
DNA (387bp)
protein (129aa)
hypothetical protein
GW2011_AR15_1_26
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

18698..19048
-----------------
DNA (351bp)
protein (117aa)
(db=HMMPfam db_id=PF11950 from=4 to=87 evalue=9.0e-10 interpro_id=IPR021857 interpro_description=Bacteriophage 92, 0rf53)
GW2011_AR15_1_27
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

19060..19560
-----------------
DNA (501bp)
protein (167aa)
transcription factor TFIIE subunit alpha
Transcription factor E n=1 Tax=Acidianus hospitalis (strain W1) RepID=F4B818_ACIHW
coiled-coil (db=Coil db_id=coil from=91 to=112 evalue=NA)
(db=HMMPfam db_id=PF02002 from=6 to=109 evalue=2.7e-13 interpro_id=IPR024550 interpro_description=TFIIEalpha/SarR/Rpc3 HTH domain)
GW2011_AR15_1_28
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(19557..20456)
-----------------
DNA (900bp)
protein (300aa)
UDP-glucose 4-epimerase
NAD-dependent epimerase/dehydratase n=6 Tax=Thermotoga RepID=A5IJR4_THEP1 rbh
NAD DEPENDENT EPIMERASE/DEHYDRATASE (db=HMMPanther db_id=PTHR10366 from=5 to=299 evalue=6.3e-109)
UDP-GLUCOSE 4-EPIMERASE (db=HMMPanther db_id=PTHR10366:SF45 from=5 to=299 evalue=6.3e-109)
GW2011_AR15_1_29
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(20511..21515)
-----------------
DNA (1005bp)
protein (335aa)
Metallo-dependent phosphatases (db=superfamily db_id=SSF56300 from=2 to=241 evalue=2.4e-15)
no description (db=Gene3D db_id=G3DSA:3.60.21.10 from=2 to=236 evalue=0.00086)
GW2011_AR15_1_30
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

21669..22292
-----------------
DNA (624bp)
protein (208aa)
coiled-coil (db=Coil db_id=coil from=70 to=91 evalue=NA)
Displaying items 1-30 of 1332 in total

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