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rifoxyb1_full_scaffold_1519

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifoxyb1_full_scaffold_1519_1
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

2..274
DNA (273bp) protein (91aa)
snRNP Sm-like protein; K04796 small nuclear ribonucleoprotein Tax=RBG_13_Woesearchaeota_36_6_curated
Sm ribonucleoprotein-like protein; K04796 small nuclear ribonucleoprotein id=5048697 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Like-Sm ribonucleoprotein core
Like-Sm ribonucleoprotein core
rifoxyb1_full_scaffold_1519_2

Not on your lists

459..842
DNA (384bp) protein (128aa)
SSU ribosomal protein s8e; K02995 small subunit ribosomal protein S8e id=5048696 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
30S ribosomal protein S8e {ECO:0000256|HAMAP-Rule:MF_00029, ECO:0000256|SAAS:SAAS00018121}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
30S ribosomal protein S8e
30S ribosomal protein S8e
rifoxyb1_full_scaffold_1519_3
unknown

Not on your lists

comp(832..1167)
DNA (336bp) protein (112aa)

This feature has no annotations

rifoxyb1_full_scaffold_1519_4
unknown

Not on your lists

1241..1408
DNA (168bp) protein (56aa)

This feature has no annotations

rifoxyb1_full_scaffold_1519_5
unknown

Not on your lists

1410..1724
DNA (315bp) protein (105aa)

This feature has no annotations

rifoxyb1_full_scaffold_1519_6
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

1684..2136
DNA (453bp) protein (151aa)
lipoprotein signal peptidase (EC:3.4.23.36); K03101 signal peptidase II [EC:3.4.23.36] Tax=CG_Woesearch_02
lipoprotein signal peptidase (EC:3.4.23.36)
lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase id=5800754 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifoxyb1_full_scaffold_1519_7
RBG_16_Euryarchaeota_68_12_curated, Euryarchaeota, Archaea

Not on your lists

2223..2459
DNA (237bp) protein (79aa)
Tax=RBG_16_Euryarchaeota_68_12_curated
rifoxyb1_full_scaffold_1519_8
RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated, Nitrospirae, Bacteria

Not on your lists

2449..2874
DNA (426bp) protein (142aa)
Tax=RBG_19FT_COMBO_Thermodesulfovibrio_42_12_curated
rifoxyb1_full_scaffold_1519_9
unknown

Not on your lists

comp(2879..3343)
DNA (465bp) protein (155aa)
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM id=5102990 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Transcriptional repressor NrdR n=1 Tax=Anaerofustis stercorihominis DSM 17244 RepID=B1C6J6_9FIRM Tax=AR20
Transcriptional repressor NrdR
Transcriptional repressor NrdR
rifoxyb1_full_scaffold_1519_10
RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

3432..3863
DNA (432bp) protein (144aa)
hypothetical protein Tax=RIFOXYD2_FULL_OD1_Falkowbacteria_34_120_curated
Putative uncharacterized protein id=3027243 bin=GWC1_CPR2_39_9 species=ACD57 genus=ACD57 taxon_order=ACD57 taxon_class=ACD57 phylum=OP11 tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1519_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3860..4216)
DNA (357bp) protein (119aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363D148
Translation initiation factor 1A Tax=AR11
Translation initiation factor 1A
Translation initiation factor 1A
rifoxyb1_full_scaffold_1519_12
RIFOXYA2_FULL_Peregrinibacteria_33_7_curated, Peregrinibacteria, Bacteria

Not on your lists

comp(4510..4935)
DNA (426bp) protein (142aa)
UPI0003CFE286 related cluster n=1 Tax=unknown RepID=UPI0003CFE286
hypothetical protein; K09005 hypothetical protein Tax=RIFOXYA2_FULL_Peregrinibacteria_33_7_curated
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1519_13

Not on your lists


comp(4932..5573)
DNA (642bp) protein (214aa)
Marine sediment metagenome DNA, contig: S03H2_L00255 {ECO:0000313|EMBL:GAH34612.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Diphthamide biosynthesis enzyme Dph2 id=5799580 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
diphthamide biosynthesis protein
diphthamide biosynthesis protein
rifoxyb1_full_scaffold_1519_14
unknown

Not on your lists

5698..6006
DNA (309bp) protein (103aa)

This feature has no annotations

rifoxyb1_full_scaffold_1519_15
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists


comp(6166..6765)
DNA (600bp) protein (200aa)
30S ribosomal protein S7P; K02992 small subunit ribosomal protein S7 Tax=CG_Woesearch_01
30S ribosomal protein S7 id=5799588 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S7
30S ribosomal protein S7
rifoxyb1_full_scaffold_1519_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(6767..7204)
DNA (438bp) protein (146aa)
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 Tax=CG_Woesearch_02
rps12P; 30S ribosomal protein S12; K02950 small subunit ribosomal protein S12 id=5043966 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
30S ribosomal protein S12
30S ribosomal protein S12
rifoxyb1_full_scaffold_1519_17
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(7362..8786)
DNA (1425bp) protein (475aa)
UPI00034A33C0 related cluster n=1 Tax=unknown RepID=UPI00034A33C0
2-nitropropane dioxygenase Tax=CG_Pacearch_06
putative 2-nitropropane dioxygenase
putative 2-nitropropane dioxygenase
rifoxyb1_full_scaffold_1519_18
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(8844..9263)
DNA (420bp) protein (140aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
transcription elongation factor NusA-like protein; K02600 N utilization substance protein A Tax=CG_Woesearch_01
hypothetical protein
hypothetical protein
rifoxyb1_full_scaffold_1519_19
nanoarchaeote Nst1, Nanoarchaeota, Archaea

Not on your lists

comp(9265..9525)
DNA (261bp) protein (87aa)
LSU ribosomal protein L30E n=1 Tax=nanoarchaeote Nst1 RepID=R1E488_9ARCH
LSU ribosomal protein L30E {ECO:0000313|EMBL:EOD42212.1}; TaxID=1294122 species="Archaea; Nanoarchaeota.;" source="nanoarchaeote Nst1.;"
50S ribosomal protein L30e
50S ribosomal protein L30e
rifoxyb1_full_scaffold_1519_20

Not on your lists

comp(9522..10655)
DNA (1134bp) protein (378aa)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO53420.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized rbh
DNA-directed RNA polymerase subunit A''
DNA-directed RNA polymerase subunit A''
rifoxyb1_full_scaffold_1519_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10652..13222)
DNA (2571bp) protein (857aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 rbh
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
DNA-directed RNA polymerase
rifoxyb1_full_scaffold_1519_22
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(13222..14424)
DNA (1203bp) protein (401aa)
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase id=5800701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
DNA-directed RNA polymerase
rifoxyb1_full_scaffold_1519_23
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14381..14644)
DNA (264bp) protein (88aa)
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] Tax=CG_Woesearch_02
DNA-directed RNA polymerase id=5800701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
DNA-directed RNA polymerase
rifoxyb1_full_scaffold_1519_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14662..15084)
DNA (423bp) protein (141aa)
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase id=5800701 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA-directed RNA polymerase
DNA-directed RNA polymerase
rifoxyb1_full_scaffold_1519_25

Not on your lists

comp(15081..16748)
DNA (1668bp) protein (556aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18 rbh
DNA-directed RNA polymerase {ECO:0000313|EMBL:KHO53417.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase
DNA-directed RNA polymerase
rifoxyb1_full_scaffold_1519_26

Not on your lists

comp(17412..17573)
DNA (162bp) protein (54aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52436.1}; TaxID=1579372 species="Archaea.;" source="archaeon GW2011_AR13.;"
rifoxyb1_full_scaffold_1519_27

Not on your lists

comp(17613..17969)
DNA (357bp) protein (119aa)
mRNA interferase {ECO:0000313|EMBL:KHO49628.1}; EC=3.1.-.- {ECO:0000313|EMBL:KHO49628.1};; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
mRNA interferase n=1 Tax=Desulfobacter postgatei 2ac9 RepID=I5B2T5_9DELT
growth inhibitor protein
growth inhibitor protein
rifoxyb1_full_scaffold_1519_28

Not on your lists

comp(17950..18168)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50623.1}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
rifoxyb1_full_scaffold_1519_29
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(18683..20095)
DNA (1413bp) protein (471aa)
transmembrane_regions Tax=CG_Woesearch_01
transmembrane_regions id=5043982 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifoxyb1_full_scaffold_1519_30
GWC2_OP11_31_9, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(20173..22215)
DNA (2043bp) protein (681aa)
SMC domain protein n=1 Tax=Nitrosopumilus maritimus (strain SCM1) RepID=A9A5V4_NITMS id=5103605 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
SMC domain protein {ECO:0000313|EMBL:KKP31782.1}; TaxID=1618586 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWC2_31_9.;"
SMC protein
SMC protein
Displaying items 1-30 of 43 in total

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