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rifcsphigho2_01_scaffold_12225

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_12225_1
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

Not on your lists

comp(1..408)
DNA (408bp) protein (136aa)
Tax=GWA2_WOR_2_47_8_curated
rifcsphigho2_01_scaffold_12225_2
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(492..1169)
DNA (678bp) protein (226aa)
putative DNA glycosylase/AP lyase (EC:3.2.2.- 4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] Tax=AR11
endonuclease III (EC:4.2.99.18); K10773 endonuclease III [EC:4.2.99.18] id=18248489 bin=AR5_curated_draft species=Candidatus Kuenenia stuttgartiensis genus=Candidatus Kuenenia taxon_order=Candidatus Brocadiales taxon_class=Planctomycetia phylum=Planctomycetes tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
putative DNA glycosylase/AP lyase (EC:3.2.2.- 4.2.99.18)
rifcsphigho2_01_scaffold_12225_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1249..1944)
DNA (696bp) protein (232aa)
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18); K03653 N-glycosylase/DNA lyase [EC:3.2.2.- 4.2.99.18] Tax=AR11
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18)
Probable N-glycosylase/DNA lyase id=5800247 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_12225_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(1963..2469)
DNA (507bp) protein (169aa)
hypothetical protein n=1 Tax=candidate division OD1 bacterium SCGC AAA011-J16 RepID=UPI000378B6FD
hypothetical protein Tax=AR11
hypothetical protein
rifcsphigho2_01_scaffold_12225_5
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2471..3019)
DNA (549bp) protein (183aa)
YdeN-like protein; K07002 Tax=AR11
YdeN-like protein; K07002 id=5045338 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
ydeN; putative sulfatase
rifcsphigho2_01_scaffold_12225_6
Thermosediminibacter oceani, Thermosediminibacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3035..4849)
DNA (1815bp) protein (605aa)
ribonucleoside-diphosphate reductase (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase, adenosylcobalamin-dependent {ECO:0000313|EMBL:ADL08847.1}; EC=1.17.4.1 {ECO:0000313|EMBL:ADL08847.1};; TaxID=555079 species="Bacteria; Firmicutes; Clostridia; The
Ribonucleoside-diphosphate reductase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9S0I9_THEOJ
rifcsphigho2_01_scaffold_12225_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

4955..5116
DNA (162bp) protein (54aa)
Tax=AR11
rifcsphigho2_01_scaffold_12225_8
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5285..5845
DNA (561bp) protein (187aa)
hypothetical protein
seg id=5043750 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR11
rifcsphigho2_01_scaffold_12225_9
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

5919..6512
DNA (594bp) protein (198aa)
transmembrane_regions id=5042247 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_01_scaffold_12225_10
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

6518..7030
DNA (513bp) protein (171aa)
hypothetical protein
transmembrane_regions id=5042246 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_01_scaffold_12225_11
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7093..7746)
DNA (654bp) protein (218aa)
hypothetical protein Tax=AR11
hypothetical protein id=5042245 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_12225_12
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

7969..9630
DNA (1662bp) protein (554aa)
hypothetical protein; K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] Tax=AR11
lysyl-tRNA synthetase (EC:6.1.1.6); K04566 lysyl-tRNA synthetase, class I [EC:6.1.1.6] id=5043637 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
lysyl-tRNA synthetase, class I (EC:6.1.1.6)
rifcsphigho2_01_scaffold_12225_13
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

9790..10050
DNA (261bp) protein (87aa)
Tax=AR11
rifcsphigho2_01_scaffold_12225_14
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10085..10831)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2F6C6_9BACT
peptidase M48 Ste24p Tax=AR11
hypothetical protein
rifcsphigho2_01_scaffold_12225_15
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10831..11178)
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2CTH6_9BACT
transcription regulator, penicillinase repressor family; K07737 putative transcriptional regulator Tax=AR11
transcription regulator, penicillinase repressor family
rifcsphigho2_01_scaffold_12225_16
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11240..12001)
DNA (762bp) protein (254aa)
Phosphoesterase n=1 Tax=Methanobacterium formicicum DSM 3637 RepID=K2QXI8_METFO
phosphoesterase; K06953 Tax=AR11
phosphoesterase
rifcsphigho2_01_scaffold_12225_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12087..13907)
DNA (1821bp) protein (607aa)
Sodium/hydrogen exchanger family protein n=1 Tax=Bacteroides sp. D22 RepID=D7J8S1_9BACE
transporter, CPA2 family; K03455 monovalent cation:H+ antiporter-2, CPA2 family Tax=AR11
transporter, CPA2 family (2.A.37)
rifcsphigho2_01_scaffold_12225_18

Not on your lists

comp(13969..14316)
DNA (348bp) protein (116aa)
Peptidyl-tRNA hydrolase, peptidyl-tRNA hydrolase, PTH2 family {ECO:0000313|EMBL:KHO51146.1}; EC=3.1.1.29 {ECO:0000313|EMBL:KHO51146.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.
peptidyl-tRNA hydrolase (EC:3.1.1.29); K04794 peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29] id=5043642 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
pth; peptidyl-tRNA hydrolase (EC:3.1.1.29)
rifcsphigho2_01_scaffold_12225_19
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14474..14590
DNA (117bp) protein (39aa)
Tax=AR11
rifcsphigho2_01_scaffold_12225_20
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(14632..15699)
DNA (1068bp) protein (356aa)
ampS; putative leucyl aminopeptidase (EC:3.4.11.-) Tax=AR11
Putative leucyl aminopeptidase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W7N4_UNCMA
leucyl aminopeptidase
rifcsphigho2_01_scaffold_12225_21
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(15834..16157)
DNA (324bp) protein (108aa)
Tax=AR11
Displaying 21 items

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