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rifcsphigho2_01_scaffold_14186

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_14186_1
AR11, Woesearchaeaota, DPANN, Archaea

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comp(118..1143)
DNA (1026bp) protein (342aa)
hypothetical protein Tax=AR11
gspF2; type II secretion system protein F GspF2 id=5044199 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Type II secretion system protein F GspF2
rifcsphigho2_01_scaffold_14186_2

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comp(1145..1963)
DNA (819bp) protein (273aa)
Type II secretion system protein
Type II secretion system protein {ECO:0000313|EMBL:KHO50885.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein; K07333 archaeal flagellar protein FlaJ id=5044200 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_14186_3
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1956..3413)
DNA (1458bp) protein (486aa)
secretory protein kinase; K07332 archaeal flagellar protein FlaI Tax=AR11
type II/IV secretion system ATPase; K07332 archaeal flagellar protein FlaI id=5045808 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Secretory protein kinase
rifcsphigho2_01_scaffold_14186_4
AR11, Woesearchaeaota, DPANN, Archaea

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comp(3615..4595)
DNA (981bp) protein (327aa)
id=5045807 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_01_scaffold_14186_5

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comp(4604..5059)
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50888.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
seg id=5044203 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_14186_6
AR11, Woesearchaeaota, DPANN, Archaea

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comp(5166..6152)
DNA (987bp) protein (329aa)
Tax=AR11
rifcsphigho2_01_scaffold_14186_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6140..6673)
DNA (534bp) protein (178aa)
id=5045804 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsphigho2_01_scaffold_14186_8
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6722..7123)
DNA (402bp) protein (134aa)
Tax=AR11
rifcsphigho2_01_scaffold_14186_9
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(7195..8154)
DNA (960bp) protein (320aa)
Peptidase A24A prepilin type IV
type IV leader peptidase family protein Tax=CG_Woesearch_02
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_14186_10

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8231..8905
DNA (675bp) protein (225aa)
Undecaprenyl pyrophosphate synthase {ECO:0000313|EMBL:AIF00786.1}; EC=2.5.1.89 {ECO:0000313|EMBL:AIF00786.1};; TaxID=1457870 species="Archaea; Euryarchaeota; environmental samples.;" source="unculture
UDP diphosphate synthase (EC:2.5.1.31); K15888 tritrans,polycis-undecaprenyl-diphosphate synthase [geranylgeranyl-diphosphate specific] [EC:2.5.1.89] id=5043940 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
undecaprenyl pyrophosphate synthase (EC:2.5.1.31)
rifcsphigho2_01_scaffold_14186_11
CG_Woesearch_02, Woesearchaeota, Archaea

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9111..9452
DNA (342bp) protein (114aa)
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae Tax=CG_Woesearch_02
rpl7ae; 50S ribosomal protein L7; K02936 large subunit ribosomal protein L7Ae id=5045790 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rpl7ae; 50S ribosomal protein L7
rifcsphigho2_01_scaffold_14186_12

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9455..9784
DNA (330bp) protein (110aa)
30S ribosomal protein S28e id=5800776 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S28e {ECO:0000256|HAMAP-Rule:MF_00292}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
30S ribosomal protein S28e
rifcsphigho2_01_scaffold_14186_13

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10039..10233
DNA (195bp) protein (65aa)
50S ribosomal protein L24e {ECO:0000313|EMBL:KHO52668.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
50S ribosomal protein L24; K02896 large subunit ribosomal protein L24e id=5045789 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
50S ribosomal protein L24
rifcsphigho2_01_scaffold_14186_14

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10230..10709
DNA (480bp) protein (160aa)
ndk; nucleoside diphosphate kinase (EC:2.7.4.6); K00940 nucleoside-diphosphate kinase [EC:2.7.4.6] id=5045788 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nucleoside diphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00451}; Short=NDK {ECO:0000256|HAMAP-Rule:MF_00451};; Short=NDP kinase {ECO:0000256|HAMAP-Rule:MF_00451};; EC=2.7.4.6 {ECO:0000256|HAMAP-Rule:M
nucleoside diphosphate kinase
rifcsphigho2_01_scaffold_14186_15
GWF2_RBX1_35_9_curated, RBX1, Bacteria

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comp(10766..11152)
DNA (387bp) protein (129aa)
CMP/dCMP deaminase zinc-binding protein id=4315144 bin=GWF2_OP9_related_35_9 species=unidentified genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GWF2_OP9_related_35_9 organism_group=OP9 (Atribacteria)
CMP/dCMP deaminase zinc-binding protein Tax=GWF2_RBX1_35_9_curated
CMP/dCMP deaminase zinc-binding protein
rifcsphigho2_01_scaffold_14186_16
unknown

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11300..11584
DNA (285bp) protein (95aa)

This feature has no annotations

rifcsphigho2_01_scaffold_14186_17
unknown

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11574..11666
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 17 items

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