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rifcsphigho2_01_scaffold_21689

Search features with annotation key words

Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_21689_1
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1..585)
DNA (585bp) protein (195aa)
leucyl-tRNA synthetase (EC:6.1.1.9); K01869 leucyl-tRNA synthetase [EC:6.1.1.4] Tax=CG_Woesearch_02
leuS; leucyl-tRNA synthetase (EC:6.1.1.4)
Leucine--tRNA ligase n=1 Tax=Tepidanaerobacter acetatoxydans (strain DSM 21804 / JCM 16047 / Re1) RepID=F4LVY6_TEPAE
rifcsphigho2_01_scaffold_21689_2
Candidatus Nitrososphaera evergladensis, Nitrososphaera, Nitrososphaerales, Nitrososphaeria, Thaumarchaeota, Archaea

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comp(635..1126)
DNA (492bp) protein (164aa)
Bifunctional deaminase-reductase domain protein n=1 Tax=Cyanothece sp. (strain PCC 7822) RepID=E0UJM6_CYAP2
dihydrofolate reductase
Dihydrofolate reductase {ECO:0000313|EMBL:AIF84649.1}; TaxID=1459636 species="Archaea; Thaumarchaeota; Nitrososphaeria; Nitrososphaerales; Nitrososphaeraceae; Nitrososphaera.;" source="Candidatus Nitr
rifcsphigho2_01_scaffold_21689_3
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1129..1761)
DNA (633bp) protein (211aa)
hypothetical protein Tax=CG_Pacearch_06
hypothetical protein id=5049606 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein
rifcsphigho2_01_scaffold_21689_4
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(1897..2094)
DNA (198bp) protein (66aa)
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] Tax=CG_Woesearch_01
DNA-directed RNA polymerase subunit N (EC:2.7.7.6); K03058 DNA-directed RNA polymerase subunit N [EC:2.7.7.6] id=5045700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit N
rifcsphigho2_01_scaffold_21689_5
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2105..2506)
DNA (402bp) protein (134aa)
30S ribosomal protein S9 n=1 Tax=Methanococcus aeolicus (strain Nankai-3 / ATCC BAA-1280) RepID=RS9_META3
30S ribosomal protein S9; K02996 small subunit ribosomal protein S9 Tax=CG_Woesearch_02
rps9p; 30S ribosomal protein S9
rifcsphigho2_01_scaffold_21689_6
unknown

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comp(2503..2916)
DNA (414bp) protein (138aa)
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO id=5103680 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L13P n=10 Tax=Thermococcus RepID=RL13_PYRKO Tax=AR20
50S ribosomal protein L13P
rifcsphigho2_01_scaffold_21689_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(2923..3285)
DNA (363bp) protein (121aa)
50S ribosomal protein L18e n=2 Tax=Staphylothermus RepID=A3DMQ7_STAMF id=5103681 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
50S ribosomal protein L15; K02883 large subunit ribosomal protein L18e Tax=CG_Woesearch_02
50S ribosomal protein L18e
rifcsphigho2_01_scaffold_21689_8
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(3414..4208)
DNA (795bp) protein (265aa)
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] Tax=CG_Woesearch_02
RNA polymerase insert; K03047 DNA-directed RNA polymerase subunit D [EC:2.7.7.6] id=5049647 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
DNA-directed RNA polymerase subunit D
rifcsphigho2_01_scaffold_21689_9

Not on your lists


comp(4212..4610)
DNA (399bp) protein (133aa)
Marine sediment metagenome DNA, contig: S01H4_S05167 {ECO:0000313|EMBL:GAH02536.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
30S ribosomal protein S11 id=5799891 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rps11p; 30S ribosomal protein S11P
rifcsphigho2_01_scaffold_21689_10

Not on your lists


comp(4614..5132)
DNA (519bp) protein (173aa)
30S ribosomal protein S4 n=1 Tax=Pyrococcus yayanosii (strain CH1 / JCM 16557) RepID=F8AGB0_PYRYC
Marine sediment metagenome DNA, contig: S01H1_L06460 {ECO:0000313|EMBL:GAF76524.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
30S ribosomal protein S4P
rifcsphigho2_01_scaffold_21689_11
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(5135..5620)
DNA (486bp) protein (162aa)
rps13p; 30S ribosomal protein S13p; K02952 small subunit ribosomal protein S13 Tax=CG_Woesearch_02
30S ribosomal protein S13P id=5799893 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S13
rifcsphigho2_01_scaffold_21689_12
GWA2_OD1_53_10, Uhrbacteria, Parcubacteria, Bacteria

Not on your lists

6201..6593
DNA (393bp) protein (131aa)
methionine-R-sulfoxide reductase (EC:1.8.4.12)
Peptide methionine sulfoxide reductase MsrB n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E729_METEZ
Peptide methionine sulfoxide reductase MsrB {ECO:0000313|EMBL:KKW32732.1}; TaxID=1618980 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Uhrbacteria) bacterium GW2011_GWA2_53_10.;"
rifcsphigho2_01_scaffold_21689_13
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(6594..7142)
DNA (549bp) protein (183aa)
id=5048391 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_01_scaffold_21689_14
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

comp(7139..7609)
DNA (471bp) protein (157aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D734E
hypothetical protein
id=5800196 Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_21689_15

Not on your lists

comp(7627..7956)
DNA (330bp) protein (110aa)
Nascent polypeptide-associated complex protein; K03626 nascent polypeptide-associated complex subunit alpha id=5048387 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Nascent polypeptide-associated complex protein {ECO:0000256|HAMAP-Rule:MF_00814}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
nac; nascent polypeptide-associated complex protein
rifcsphigho2_01_scaffold_21689_16
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(7970..8125)
DNA (156bp) protein (52aa)
id=5048386 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR4
rifcsphigho2_01_scaffold_21689_17
unknown

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comp(8666..8944)
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsphigho2_01_scaffold_21689_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(8977..9642)
DNA (666bp) protein (222aa)
RNA methylase; K07444 putative N6-adenine-specific DNA methylase [EC:2.1.1.-] Tax=RBG_13_Woesearchaeota_36_6_curated
rRNA (Guanine-N(2)-)-methyltransferase id=5800237 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
RNA methylase
Displaying 18 items

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