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rifcsphigho2_01_scaffold_2962

Search features with annotation key words

Displaying 27 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_2962_1
Methanosarcina sp. 2.H.A.1B.4, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(2..934)
DNA (933bp) protein (311aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B355D7
Uncharacterized protein {ECO:0000313|EMBL:KKG10940.1}; TaxID=1483600 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina s
hypothetical protein
rifcsphigho2_01_scaffold_2962_2
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(921..1772)
DNA (852bp) protein (284aa)
Uncharacterized protein {ECO:0000313|EMBL:AKB62441.1}; TaxID=1434115 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina m
Putative uncharacterized protein id=4086305 bin=GWF2_Bacteroidetes_38_335 species=Desulfococcus oleovorans genus=Desulfococcus taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Bacteroidetes_38_335 organism_group=Bacteroidetes organism_desc=a11
Hypothetical protein
rifcsphigho2_01_scaffold_2962_3

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comp(1831..3666)
DNA (1836bp) protein (612aa)
id=5045888 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46233.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_2962_4

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comp(3709..4419)
DNA (711bp) protein (237aa)
Methyltransferase type 12 n=1 Tax=Pedosphaera parvula Ellin514 RepID=B9XIN9_9BACT
Marine sediment metagenome DNA, contig: S03H2_S19080 {ECO:0000313|EMBL:GAH81455.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
type 11 methyltransferase
rifcsphigho2_01_scaffold_2962_5
GWF2_OP11_38_6, Daviesbacteria, Microgenomates, Bacteria

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4507..5391
DNA (885bp) protein (295aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036EF829
Glycosyl transferase family 2 {ECO:0000313|EMBL:KKQ76319.1}; TaxID=1618432 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWF2_38_6.;"
Glycosyltransferases involved in cell wall biogenesis
rifcsphigho2_01_scaffold_2962_6

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comp(5415..6347)
DNA (933bp) protein (311aa)
dTDP-glucose 4,6-dehydratase {ECO:0000313|EMBL:KHO50273.1}; EC=4.2.1.46 {ECO:0000313|EMBL:KHO50273.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NAD-dependent epimerase/dehydratase id=1714681 bin=GWB2_Ignavibacteria_35_12 species=Rhodothermus marinus genus=Rhodothermus taxon_order=Bacteroidetes Order II. Incertae sedis taxon_class=unknown phylum=Bacteroidetes tax=GWB2_Ignavibacteria_35_12 organism_group=Ignavibacteria organism_desc=Good
NAD-dependent epimerase/dehydratase family protein
rifcsphigho2_01_scaffold_2962_7
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6447..7319
DNA (873bp) protein (291aa)
dTDP-4-dehydrorhamnose reductase {ECO:0000313|EMBL:CDL91653.1}; EC=1.1.1.133 {ECO:0000313|EMBL:CDL91653.1};; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
dTDP-4-dehydrorhamnose reductase (EC:1.1.1.133)
hypothetical protein n=1 Tax=Oscillatoria sp. PCC 10802 RepID=UPI00034CA1EC
rifcsphigho2_01_scaffold_2962_8

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7316..8404
DNA (1089bp) protein (363aa)
Predicted glycosyl transferase, group 1 n=1 Tax=gamma proteobacterium HdN1 RepID=E1VPE3_9GAMM
Group 1 glycosyl transferase {ECO:0000313|EMBL:KHO50278.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
group 1 glycosyl transferase
rifcsphigho2_01_scaffold_2962_9
RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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8452..9510
DNA (1059bp) protein (353aa)
dehydrogenase and related protein Tax=RIFOXYD12_FULL_Deltaproteobacteria_57_12_curated
Oxidoreductase, NAD-binding domain protein id=3959734 bin=GWA2_Ignavibacteria-rel_35_8 species=RBG1 genus=RBG1 taxon_order=RBG1 taxon_class=RBG1 phylum=Zixibacteria tax=GWA2_Ignavibacteria-rel_35_8 organism_group=Ignavibacteria
oxidoreductase domain protein
rifcsphigho2_01_scaffold_2962_10
CG_Woesearch_01, Woesearchaeota, Archaea

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9534..11153
DNA (1620bp) protein (540aa)
id=5045926 Tax=CG_Woesearch_01
id=5044246 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_2962_11
unknown

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11137..11484
DNA (348bp) protein (116aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2962_12

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comp(11481..11885)
DNA (405bp) protein (135aa)
id=5045928 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46273.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_2962_13

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comp(11842..13482)
DNA (1641bp) protein (547aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50382.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
id=5044235 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_2962_14
AR4, Woesearchaeaota, DPANN, Archaea

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13569..14861
DNA (1293bp) protein (431aa)
radical SAM domain-containing protein id=5043956 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
radical SAM domain-containing protein Tax=AR4
radical SAM domain-containing protein
rifcsphigho2_01_scaffold_2962_15
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(14871..17150)
DNA (2280bp) protein (760aa)
Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_2962_16

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comp(17212..18315)
DNA (1104bp) protein (368aa)
Glycosyl transferase n=1 Tax=Thaumarchaeota archaeon SCGC AB-539-E09 RepID=M7TC55_9ARCH
Putative Glycosyl transferase family 2 {ECO:0000313|EMBL:CEG13051.1}; TaxID=717931 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="groundwater metagenome.;"
family 2 glycosyl transferase
rifcsphigho2_01_scaffold_2962_17
RBG_13_Nitrospirae_41_22_curated, Nitrospirae, Bacteria

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18385..19059
DNA (675bp) protein (225aa)
dolichyl-phosphate mannose synthase related protein Tax=RBG_13_Nitrospirae_41_22_curated
dolichol-p-glucose synthetase id=7200469 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
family 2 glycosyl transferase
rifcsphigho2_01_scaffold_2962_18

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comp(19214..21439)
DNA (2226bp) protein (742aa)
id=5045932 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46277.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_2962_19

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comp(21443..22912)
DNA (1470bp) protein (490aa)
wecB; UDP-N-acetylglucosamine 2-epimerase (EC:5.1.3.14)
uae; UDP-N-acetylglucosamine 2-epimerase id=5045933 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
UDP-N-acetylglucosamine 2-epimerase {ECO:0000313|EMBL:KHO46278.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_2962_20
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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23041..24336
DNA (1296bp) protein (432aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003751837
radical SAM protein Tax=RBG_13_Pacearchaeota_36_9_curated
radical SAM domain-containing protein
rifcsphigho2_01_scaffold_2962_21
GWF2_Planctomycetes_40_8_curated, Planctomycetes, Bacteria

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24345..25241
DNA (897bp) protein (299aa)
NAD-dependent epimerase/dehydratase; K00329 NADH dehydrogenase [EC:1.6.5.3]; K00356 NADH dehydrogenase [EC:1.6.99.3] Tax=GWF2_Planctomycetes_40_8_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000367033B
NAD-dependent epimerase/dehydratase
rifcsphigho2_01_scaffold_2962_22
GWA1_OP11_39_12_plus, Woesebacteria, Microgenomates, Bacteria

Not on your lists

comp(25251..25973)
DNA (723bp) protein (241aa)
Glycosyltransferase {ECO:0000313|EMBL:KKQ98119.1}; TaxID=1618549 species="Bacteria; Microgenomates.;" source="Microgenomates (Woesebacteria) bacterium GW2011_GWA1_39_12.;"
wcaA; glycosyltransferases id=23560 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
WcaA; glycosyltransferases
rifcsphigho2_01_scaffold_2962_23
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(25975..26667)
DNA (693bp) protein (231aa)
family 2 glycosyl transferase id=5095307 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome rbh
Family 2 glycosyl transferase {ECO:0000313|EMBL:KKP36328.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
Glycosyl transferase family 2
rifcsphigho2_01_scaffold_2962_24
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

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comp(26699..27193)
DNA (495bp) protein (165aa)
rfaE bifunctional protein id=5095306 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
RfaE bifunctional protein {ECO:0000313|EMBL:KKP36327.1}; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_33_10.;"
rfaE bifunctional protein
rifcsphigho2_01_scaffold_2962_25
Peregrinibacteria bacterium GW2011_GWF2_33_10, Peregrinibacteria, Bacteria

Not on your lists

comp(27177..27710)
DNA (534bp) protein (178aa)
cell division; K03273 D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase [EC:3.1.3.82 3.1.3.83] id=5095305 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
Cell division, D-glycero-D-manno-heptose 1,7-bisphosphate phosphatase {ECO:0000313|EMBL:KKP36326.1}; EC=3.1.3.82 {ECO:0000313|EMBL:KKP36326.1};; TaxID=1619065 species="Bacteria; Peregrinibacteria.;" s
histidinol-phosphate phosphatase family protein (EC:3.1.3.15)
rifcsphigho2_01_scaffold_2962_26
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(27707..28609)
DNA (903bp) protein (301aa)
PfkB domain protein {ECO:0000313|EMBL:KKR79164.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
rfaE bifunctional protein id=5095304 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
PfkB domain-containing protein
rifcsphigho2_01_scaffold_2962_27
RIFOXYC1_FULL_Bdellovibrionales_37_79_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(28635..29372)
DNA (738bp) protein (246aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1ZJF3_9BACT
hypothetical protein Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated
hypothetical protein
Displaying 27 items

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