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rifcsphigho2_01_scaffold_19876

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_19876_1
unknown

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comp(1..105)
DNA (105bp) protein (35aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_2
unknown

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252..641
DNA (390bp) protein (130aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_3
unknown

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638..937
DNA (300bp) protein (100aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_4

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939..1877
DNA (939bp) protein (313aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003704509
Marine sediment metagenome DNA, contig: S01H1_S09303 {ECO:0000313|EMBL:GAG03678.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
serine protease MucD
rifcsphigho2_01_scaffold_19876_5
unknown

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2008..2415
DNA (408bp) protein (136aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_6
Methanoregula formicica, Methanoregula, Methanomicrobiales, Methanomicrobia, Euryarchaeota, Archaea

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2425..3009
DNA (585bp) protein (195aa)
Membrane protein, MarC family n=1 Tax=Methanoregula formicica (strain DSM 22288 / NBRC 105244 / SMSP) RepID=L0HJY9_METFS
membrane protein, MarC family
UPF0056 membrane protein {ECO:0000256|RuleBase:RU362048}; Flags: Precursor;; TaxID=593750 species="Archaea; Euryarchaeota; Methanomicrobia; Methanomicrobiales; Methanoregulaceae; Methanoregula.;" sour
rifcsphigho2_01_scaffold_19876_7
RHI_OP11_Roizmanbacteria_36_11, Roizmannbacteria, Microgenomates, Bacteria

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3163..3789
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=SAR406 cluster bacterium SCGC AB-629-J13 RepID=UPI000375A5F2
rhomboid family protein Tax=RIFCSPHIGHO2_12_FULL_OP11_Roizmanbacteria_36_11_curated
rhomboid family protein
rifcsphigho2_01_scaffold_19876_8
unknown

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comp(3961..4263)
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_9
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


4674..6125
DNA (1452bp) protein (484aa)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=CG_Woesearch_02
Bifunctional aminoacyl-tRNA synthetase (Fragment) id=5800815 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
prolyl-tRNA synthetase
rifcsphigho2_01_scaffold_19876_10

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6361..6669
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3RX62_FERPA
Uncharacterized protein {ECO:0000313|EMBL:KKN31900.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_01_scaffold_19876_11

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6666..7154
DNA (489bp) protein (163aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon GZfos27A8 RepID=Q64BN6_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KHO48969.1}; TaxID=1579368 species="Archaea.;" source="archaeon GW2011_AR6.;"
hypothetical protein
rifcsphigho2_01_scaffold_19876_12

Not on your lists

comp(7201..8055)
DNA (855bp) protein (285aa)
phosphoribosyl transferase; K00948 ribose-phosphate pyrophosphokinase [EC:2.7.6.1] id=5042287 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:KHO46785.1}; EC=2.7.6.1 {ECO:0000313|EMBL:KHO46785.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
rifcsphigho2_01_scaffold_19876_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(8068..8850)
DNA (783bp) protein (261aa)
Uncharacterized protein n=1 Tax=Pyrococcus furiosus COM1 RepID=I6UZ03_9EURY
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_01_scaffold_19876_14

Not on your lists

8873..9445
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=unclassified Aminicenantes RepID=UPI00037EB6CE
Uncharacterized protein {ECO:0000313|EMBL:KHO51395.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
hypothetical protein
rifcsphigho2_01_scaffold_19876_15

Not on your lists

9503..10573
DNA (1071bp) protein (357aa)
Outer membrane adhesin like protein proteiin {ECO:0000313|EMBL:KHO52075.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
putative hemolysin id=5045996 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_19876_16
unknown

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10628..10858
DNA (231bp) protein (77aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_17
unknown

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10919..11092
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_18
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

11218..11985
DNA (768bp) protein (256aa)
NEQ098 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=Q74MK1_NANEQ id=5102985 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=AR17
hypothetical protein
rifcsphigho2_01_scaffold_19876_19
unknown

Not on your lists

12004..12099
DNA (96bp) protein (32aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_20
BJP_IG2158_Thermoplasmatales_53_16, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

Not on your lists

12130..12705
DNA (576bp) protein (192aa)
Homeodomain-like domain protein n=1 Tax=Leptospira weilii str. UI 13098 RepID=M6Q0E8_9LEPT
ISSod10, transposase OrfA
Tax=BJP_IG2158_Thermoplasmatales_53_16
rifcsphigho2_01_scaffold_19876_21
Candidatus Accumulibacter sp. BA-91, Candidatus Accumulibacter, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12672..13157
DNA (486bp) protein (162aa)
Transposase {ECO:0000313|EMBL:KFB70896.1}; TaxID=1454002 species="Bacteria; Proteobacteria; Betaproteobacteria; Candidatus Accumulibacter.;" source="Candidatus Accumulibacter sp. BA-91.;"
rifcsphigho2_01_scaffold_19876_22
unknown

Not on your lists

13166..13507
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsphigho2_01_scaffold_19876_23
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

13585..14223
DNA (639bp) protein (213aa)
proteasome endopeptidase complex subunit beta (EC:3.4.25.1); K03433 proteasome beta subunit [EC:3.4.25.1] Tax=RBG_13_Woesearchaeota_36_6_curated
proteasome subunit beta; K03433 proteasome beta subunit [EC:3.4.25.1] id=5044631 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Proteasome subunit beta
rifcsphigho2_01_scaffold_19876_24
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

14335..16227
DNA (1893bp) protein (631aa)
Cleavage and polyadenylation specificity factor subunit like protein Tax=AR11
kh-domain/beta-lactamase-domain protein; K07041 id=5044630 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
KH-domain/beta-lactamase-domain-containing protein
rifcsphigho2_01_scaffold_19876_25
Staphylothermus hellenicus, Staphylothermus, Desulfurococcales, Thermoprotei, Crenarchaeota, Archaea

Not on your lists

16484..16732
DNA (249bp) protein (83aa)
N-6 DNA methylase n=1 Tax=Staphylothermus hellenicus (strain DSM 12710 / JCM 10830 / BK20S6-10-b1 / P8) RepID=D7DBM9_STAHD
N-6 DNA methylase
N-6 DNA methylase {ECO:0000313|EMBL:ADI31576.1}; TaxID=591019 species="Archaea; Crenarchaeota; Thermoprotei; Desulfurococcales; Desulfurococcaceae; Staphylothermus.;" source="Staphylothermus hellenicu
Displaying 25 items

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