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rifcsphigho2_01_scaffold_9689

Search features with annotation key words

Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_9689_1
unknown

Not on your lists

comp(3..62)
DNA (60bp) protein (20aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9689_2

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116..499
DNA (384bp) protein (128aa)
Uncharacterized protein {ECO:0000313|EMBL:KKK73573.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
Translation-associated GTPase id=5800320 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
translation-associated GTPase
rifcsphigho2_01_scaffold_9689_3
CG_Woesearch_02, Woesearchaeota, Archaea

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613..1218
DNA (606bp) protein (202aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374EA2E
ychF; translation-associated GTPase; K06942 Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_01_scaffold_9689_4
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

comp(1514..2257)
DNA (744bp) protein (248aa)
Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
rifcsphigho2_01_scaffold_9689_5

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2356..3057
DNA (702bp) protein (234aa)
hypothetical protein n=1 Tax=Candidatus Paceibacter normanii SCGC AAA255-P19 RepID=UPI00037A53A1
Uncharacterized protein {ECO:0000313|EMBL:KKK72414.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
teichoic acid biosynthesis-like protein
rifcsphigho2_01_scaffold_9689_6

Not on your lists

comp(3058..5781)
DNA (2724bp) protein (908aa)
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
rifcsphigho2_01_scaffold_9689_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5815..6621)
DNA (807bp) protein (269aa)
Chromosome partition protein Smc Tax=AR11
chromosome segregation ATPase; K03529 chromosome segregation protein id=5044048 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Chromosome partition protein Smc
rifcsphigho2_01_scaffold_9689_8
unknown

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6813..6959
DNA (147bp) protein (49aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9689_9
unknown

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comp(6964..7233)
DNA (270bp) protein (90aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9689_10
unknown

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comp(7217..7933)
DNA (717bp) protein (239aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9689_11

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comp(8026..8181)
DNA (156bp) protein (52aa)
AbrB family transcriptional regulator {ECO:0000313|EMBL:KHO45543.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_9689_12
unknown

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8284..8799
DNA (516bp) protein (172aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9689_13
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(9185..10219)
DNA (1035bp) protein (345aa)
hypothetical protein
Phosphoesterase, DHHA1 Tax=CG_Woesearch_02
DHH phosphoesterases id=5800602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_9689_14
R_OP11_Woesebacteria_39_10b, Woesebacteria, Microgenomates, Bacteria

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10306..10563
DNA (258bp) protein (86aa)
hypothetical protein
coiled-coil 3..24 Tax=RIFCSPLOWO2_01_FULL_OP11_Woesebacteria_39_10b_curated
Uncharacterized protein id=5801993 bin=PER_GWA2_38_35 species=PERA2_38_36 genus=PERA2_38_36 taxon_order=PERA2_38_36 taxon_class=PERA2_38_36 phylum=PER tax=PER_GWA2_38_35 organism_group=PER (Peregrinibacteria) organism_desc=This is the curated version (7 contigs can be represented as 5 scaffolds)
rifcsphigho2_01_scaffold_9689_15
CG_Woesearch_02, Woesearchaeota, Archaea

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10603..11838
DNA (1236bp) protein (412aa)
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein id=5048642 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein
rifcsphigho2_01_scaffold_9689_16
unknown

Not on your lists

12049..12342
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsphigho2_01_scaffold_9689_17
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12345..14873)
DNA (2529bp) protein (843aa)
alaS; alanyl-tRNA synthetase (EC:6.1.1.7)
Alanine--tRNA ligase Tax=AR11
Alanine--tRNA ligase id=5799660 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Displaying 17 items

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