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rifcsphigho2_01_scaffold_4731

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_4731_1
GWC1_Treponema_61_84_curated, Spirochaetes, Bacteria

Not on your lists

comp(3..1151)
-----------------
DNA (1149bp)
protein (383aa)
hypothetical protein n=1 Tax=Atribacteria bacterium SCGC AAA252-M02 RepID=UPI00037085BA
membrane protein Tax=GWC1_Treponema_61_84_curated
major facilitator superfamily MFS_1
rifcsphigho2_01_scaffold_4731_2
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1172..1519)
-----------------
DNA (348bp)
protein (116aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2FB15_9BACT
Uncharacterized protein Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsphigho2_01_scaffold_4731_3
unknown

Not on your lists

comp(1585..2325)
-----------------
DNA (741bp)
protein (247aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_4
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

2526..2789
-----------------
DNA (264bp)
protein (88aa)
hypothetical protein Tax=AR11
id=5048363 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_4731_5
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists

2801..3820
-----------------
DNA (1020bp)
protein (340aa)
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5048364 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA Tax=AR4
DNA repair and recombination RadA-like protein
rifcsphigho2_01_scaffold_4731_6
unknown

Not on your lists

3980..4372
-----------------
DNA (393bp)
protein (131aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_7
unknown

Not on your lists

comp(4394..5500)
-----------------
DNA (1107bp)
protein (369aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_8
Deferribacter desulfuricans, Deferribacter, Deferribacterales, Deferribacteres, Deferribacteres, Bacteria

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5564..5980
-----------------
DNA (417bp)
protein (139aa)
Uncharacterized protein n=1 Tax=Deferribacter desulfuricans (strain DSM 14783 / JCM 11476 / NBRC 101012 / SSM1) RepID=D3P9B0_DEFDS
putative uncharacterized protein family UPF0047
Uncharacterized protein {ECO:0000313|EMBL:BAI81300.1}; TaxID=639282 species="Bacteria; Deferribacteres; Deferribacterales; Deferribacteraceae; Deferribacter.;" source="Deferribacter desulfuricans (str
rifcsphigho2_01_scaffold_4731_9
unknown

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comp(5982..6452)
-----------------
DNA (471bp)
protein (157aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_10
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6523..6906)
-----------------
DNA (384bp)
protein (128aa)
hypothetical protein
PIN domain-like id=5241235 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_01_scaffold_4731_11
BJP_08E140C01_10KDA_Methanosarcinales_43_67, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(6903..7301)
-----------------
DNA (399bp)
protein (133aa)
Tax=BJP_08E140C01_10KDA_Methanosarcinales_43_67
rifcsphigho2_01_scaffold_4731_12
GWA1_OP11_42_6_partial, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7334..7711
-----------------
DNA (378bp)
protein (126aa)
Deoxyribonuclease/rho motif-related TRAM {ECO:0000313|EMBL:KKS64513.1}; TaxID=1618420 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_42_6.;"
Putative RNA-binding protein, contains TRAM domain id=5800293 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_4731_13
GWA1_OP11_42_6_partial, Daviesbacteria, Microgenomates, Bacteria

Not on your lists

7732..8265
-----------------
DNA (534bp)
protein (178aa)
2'-5' RNA ligase n=1 Tax=Desulfovibrio salexigens (strain ATCC 14822 / DSM 2638 / NCIB 8403 / VKM B-1763) RepID=C6BS46_DESAD
2'-5' RNA ligase {ECO:0000313|EMBL:KKS64512.1}; Flags: Fragment;; TaxID=1618420 species="Bacteria; Microgenomates.;" source="Microgenomates (Daviesbacteria) bacterium GW2011_GWA1_42_6.;"
2'-5' RNA ligase
rifcsphigho2_01_scaffold_4731_14
unknown

Not on your lists

comp(8266..8682)
-----------------
DNA (417bp)
protein (139aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_15
unknown

Not on your lists

comp(8672..9169)
-----------------
DNA (498bp)
protein (166aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_16
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

9244..10209
-----------------
DNA (966bp)
protein (322aa)
MarR family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA id=5044008 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
rifcsphigho2_01_scaffold_4731_17
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists


10312..10908
-----------------
DNA (597bp)
protein (199aa)
30S ribosomal protein S2 {ECO:0000313|EMBL:KKR78533.1}; TaxID=1618734 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWA2_40_9.;"
30S ribosomal protein S2 id=5799985 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
30S ribosomal protein S2
rifcsphigho2_01_scaffold_4731_18
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(10874..11545)
-----------------
DNA (672bp)
protein (224aa)
DNA repair and recombination protein RadB n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4BTV7_METCG
radB; DNA repair and recombination protein RadB; K04484 DNA repair protein RadB Tax=RBG_13_Woesearchaeota_36_6_curated
radB; DNA repair and recombination protein RadB
rifcsphigho2_01_scaffold_4731_19
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

11617..13107
-----------------
DNA (1491bp)
protein (497aa)
hypothetical protein
Uncharacterized protein Tax=RBG_13_Woesearchaeota_36_6_curated
Uncharacterized protein id=5050179 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsphigho2_01_scaffold_4731_20
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

13104..14504
-----------------
DNA (1401bp)
protein (467aa)
id=5050180 Tax=CG_Woesearch_02
seg id=5800032 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_4731_21
unknown

Not on your lists

14563..14871
-----------------
DNA (309bp)
protein (103aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_22
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(14887..16383)
-----------------
DNA (1497bp)
protein (499aa)
Putative uncharacterized protein n=5 Tax=Candidatus Haloredivivus sp. G17 RepID=H0AAF4_9EURY id=5103320 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Putative uncharacterized protein Tax=CG_Pacearch_01
rifcsphigho2_01_scaffold_4731_23
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

16494..17747
-----------------
DNA (1254bp)
protein (418aa)
Glycosyl transferase, group 2 family protein/polysaccharide deacetylase n=1 Tax=Streptomyces himastatinicus ATCC 53653 RepID=D9WJX0_9ACTO
Polysaccharide deacetylase Tax=AR11
polysaccharide deacetylase
rifcsphigho2_01_scaffold_4731_24

Not on your lists

17913..19226
-----------------
DNA (1314bp)
protein (438aa)
Glucomannan 4-beta-mannosyltransferase {ECO:0000313|EMBL:KHO53046.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
glycosyltransferase id=18248834 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
histidine kinase
rifcsphigho2_01_scaffold_4731_25
unknown

Not on your lists

19204..19842
-----------------
DNA (639bp)
protein (213aa)

This feature has no annotations

rifcsphigho2_01_scaffold_4731_26
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(19829..20350)
-----------------
DNA (522bp)
protein (174aa)
helix-turn-helix domain-containing protein; K03627 putative transcription factor Tax=CG_Woesearch_02
Putative transcription factor, MBF1 like protein id=5800236 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_4731_27

Not on your lists

20389..21027
-----------------
DNA (639bp)
protein (213aa)
ArsR family transcriptional regulator id=5050187 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
ArsR family transcriptional regulator {ECO:0000313|EMBL:KHO44968.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
transcriptional regulator
rifcsphigho2_01_scaffold_4731_28
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

21060..21566
-----------------
DNA (507bp)
protein (169aa)
adenylate kinase (EC:2.7.4.3) id=5045728 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
adenylate kinase Tax=CG_Woesearch_02
Adenylate kinase
rifcsphigho2_01_scaffold_4731_29
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

21563..22645
-----------------
DNA (1083bp)
protein (361aa)
Uncharacterized protein n=1 Tax=Pyrococcus abyssi (strain GE5 / Orsay) RepID=Q9V0U1_PYRAB
fibronectin-binding a domain protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_01_scaffold_4731_30

Not on your lists

22715..22876
-----------------
DNA (162bp)
protein (54aa)
id=5050200 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO44981.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying items 1-30 of 33 in total

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