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rifcsphigho2_01_scaffold_10250

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_10250_1
GWB1_OD1_43_7, Nomurabacteria, Parcubacteria, Bacteria

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comp(1..438)
-----------------
DNA (438bp)
protein (146aa)
protein-L-isoaspartate O-methyltransferase (EC:2.1.1.77)
Protein-L-isoaspartate O-methyltransferase n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7EBC2_METEZ
Protein-L-isoaspartate O-methyltransferase {ECO:0000313|EMBL:KKT19699.1}; TaxID=1618747 species="Bacteria; Parcubacteria.;" source="Parcubacteria (Nomurabacteria) bacterium GW2011_GWB1_43_7.;"
rifcsphigho2_01_scaffold_10250_2
unknown

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comp(425..547)
-----------------
DNA (123bp)
protein (41aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10250_3
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

663..3083
-----------------
DNA (2421bp)
protein (807aa)
ppsA5; protein PpsA5 (EC:2.7.9.2)
Phosphoenolpyruvate synthase id=5799772 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Phosphoenolpyruvate synthase Tax=AR15
rifcsphigho2_01_scaffold_10250_4

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comp(3080..3982)
-----------------
DNA (903bp)
protein (301aa)
Putative RNA methylase id=5800383 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61714.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
RNA methylase
rifcsphigho2_01_scaffold_10250_5
Parcubacteria bacterium GW2011_GWE2_37_8, Parcubacteria, Bacteria

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comp(4086..4607)
-----------------
DNA (522bp)
protein (174aa)
hypothetical protein n=1 Tax=Parcubacteria bacterium SCGC AAA011-A09 RepID=UPI00035C0FA7
Uncharacterized protein {ECO:0000313|EMBL:KKQ42834.1}; TaxID=1618948 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWE2_37_8.;"
hypothetical protein
rifcsphigho2_01_scaffold_10250_6
unknown

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4743..5978
-----------------
DNA (1236bp)
protein (412aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10250_7
Thermoplasmatales archaeon SCGC AB-539-C06, Thermoplasmatales, Thermoplasmata, Euryarchaeota, Archaea

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5950..6264
-----------------
DNA (315bp)
protein (105aa)
Uncharacterized protein n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-C06 RepID=N6VWU3_9EURY
Uncharacterized protein {ECO:0000313|EMBL:ENO12384.1}; TaxID=1242690 species="Archaea; Euryarchaeota; Thermoplasmata; Thermoplasmatales.;" source="Thermoplasmatales archaeon SCGC AB-539-C06.;"
rifcsphigho2_01_scaffold_10250_8
unknown

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comp(6257..6592)
-----------------
DNA (336bp)
protein (112aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10250_9
CG_Woesearch_02, Woesearchaeota, Archaea

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6767..8527
-----------------
DNA (1761bp)
protein (587aa)
InfB_2; translation initiation factor IF-2; K03243 translation initiation factor 5B Tax=CG_Woesearch_02
Probable translation initiation factor IF-2 id=5800003 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
putative translation initiation factor IF-2
rifcsphigho2_01_scaffold_10250_10
zPERA2_38_36, Peregrinibacteria, Bacteria

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comp(8524..9621)
-----------------
DNA (1098bp)
protein (366aa)
relA; GTP pyrophosphokinase (EC:2.7.6.5); K00951 GTP pyrophosphokinase [EC:2.7.6.5] id=5095356 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
(p)ppGpp synthetase I SpoT/RelA (EC:2.7.6.5)
GTP diphosphokinase Tax=zPERA2_38_36
rifcsphigho2_01_scaffold_10250_11
CG_Woesearch_02, Woesearchaeota, Archaea

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9732..10199
-----------------
DNA (468bp)
protein (156aa)
hypothetical protein Tax=CG_Woesearch_02
Putative uncharacterized protein id=5800004 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_10250_12
unknown

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comp(10176..11423)
-----------------
DNA (1248bp)
protein (416aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10250_13

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comp(11469..11876)
-----------------
DNA (408bp)
protein (136aa)
Putative uncharacterized protein id=5800008 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61339.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsphigho2_01_scaffold_10250_14
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(11882..12100)
-----------------
DNA (219bp)
protein (73aa)
hypothetical protein
id=5800009 Tax=CG_Woesearch_02
id=5800009 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_10250_15
R_OD1_48_18, Parcubacteria, Bacteria

Not on your lists

comp(12145..12975)
-----------------
DNA (831bp)
protein (277aa)
Methyltransferase type 11 n=1 Tax=uncultured bacterium RepID=K2AA25_9BACT
Pc21g22160 Tax=RIFCSPLOWO2_01_FULL_OD1_48_18_curated
methyltransferase type 11
rifcsphigho2_01_scaffold_10250_16
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(13023..14144)
-----------------
DNA (1122bp)
protein (374aa)
small GTP-binding protein; K06944 Tax=CG_Woesearch_02
GTP-binding protein id=5799709 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
GTP-binding protein
rifcsphigho2_01_scaffold_10250_17
CG_Woesearch_01, Woesearchaeota, Archaea

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14196..14750
-----------------
DNA (555bp)
protein (185aa)
mscs mechanosensitive ion channel Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_10250_18
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14728..14976)
-----------------
DNA (249bp)
protein (83aa)
Uncharacterized protein conserved in archaea Tax=CG_Woesearch_02
Uncharacterized protein conserved in archaea id=5799820 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_10250_19

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comp(14963..15304)
-----------------
DNA (342bp)
protein (114aa)
Prefoldin subunit beta id=5799819 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Prefoldin subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; GimC subunit beta {ECO:0000256|HAMAP-Rule:MF_00307}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Prefoldin subunit beta
rifcsphigho2_01_scaffold_10250_20
unknown

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comp(15288..15527)
-----------------
DNA (240bp)
protein (80aa)

This feature has no annotations

rifcsphigho2_01_scaffold_10250_21

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comp(15648..15983)
-----------------
DNA (336bp)
protein (112aa)
50S ribosomal protein L37Ae {ECO:0000256|HAMAP-Rule:MF_00327}; Ribosomal protein L43e {ECO:0000256|HAMAP-Rule:MF_00327}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rpl37ae; 50S ribosomal protein L37; K02921 large subunit ribosomal protein L37Ae id=5044064 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rpl37ae; 50S ribosomal protein L37Ae
rifcsphigho2_01_scaffold_10250_22
CG_Micra_02, Micraarchaeota, Archaea

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comp(16124..16768)
-----------------
DNA (645bp)
protein (215aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374F9B4
hypothetical protein Tax=CG_Micra_02
rifcsphigho2_01_scaffold_10250_23
R_OD1_Falkowbacteria_39_8, Falkowbacteria, Parcubacteria, Bacteria

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comp(16897..17433)
-----------------
DNA (537bp)
protein (179aa)
hypothetical protein n=1 Tax=BRC1 bacterium SCGC AAA252-M09 RepID=UPI00036B7989
general secretion pathway protein G; K02456 general secretion pathway protein G Tax=RIFCSPHIGHO2_01_FULL_OD1_Falkowbacteria_39_8_curated
Displaying 23 items

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