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rifcsphigho2_01_scaffold_41878

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_41878_1
CG_Pacearch_02, Pacearchaeota, Archaea

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149..715
DNA (567bp) protein (189aa)
Marine sediment metagenome DNA, contig: S03H2_S02756 Tax=CG_Pacearch_02
rifcsphigho2_01_scaffold_41878_2
unknown

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715..1170
DNA (456bp) protein (152aa)

This feature has no annotations

rifcsphigho2_01_scaffold_41878_3
Thermoanaerobaculum aquaticum, Thermoanaerobaculum, Acidobacteria, Bacteria

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1220..1720
DNA (501bp) protein (167aa)
Nodulin 21-related protein n=1 Tax=Spirochaeta sp. L21-RPul-D2 RepID=V5WEH8_9SPIO
Membrane protein {ECO:0000313|EMBL:KDA54280.1}; TaxID=1312852 species="Bacteria; Acidobacteria; Acidobacteria subdivision 23; Thermoanaerobaculum.;" source="Thermoanaerobaculum aquaticum.;"
nodulin 21-related protein
rifcsphigho2_01_scaffold_41878_4
R_RIF_OD1_02_44_13, RIF-OD1-2, Parcubacteria, Bacteria

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1764..2099
DNA (336bp) protein (112aa)
Putative uncharacterized protein Tax=RIFCSPLOWO2_01_FULL_RIF_OD1_02_44_13_curated
rifcsphigho2_01_scaffold_41878_5
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

2152..2361
DNA (210bp) protein (70aa)
hypothetical protein Tax=CG_Pacearch_05
rifcsphigho2_01_scaffold_41878_6

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2361..2729
DNA (369bp) protein (123aa)
PIN protein
PIN domain-containing protein id=5241434 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
PIN protein {ECO:0000313|EMBL:AJF60425.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsphigho2_01_scaffold_41878_7
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(2767..4383)
DNA (1617bp) protein (539aa)
RecJ-like exonuclease (DnaJ-type Zn finger protein); K07463 archaea-specific RecJ-like exonuclease Tax=RBG_13_Pacearchaeota_36_9_curated
RecJ-like exonuclease (DnaJ-type Zn finger protein) id=3795705 bin=GWF2_Lentisphaerae_38_69 species=Desulfobacterium autotrophicum genus=Desulfobacterium taxon_order=Desulfobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWF2_Lentisphaerae_38_69 organism_group=Lentisphaerae organism_desc=a349
RecJ-like exonuclease (DnaJ-type Zn finger protein)
rifcsphigho2_01_scaffold_41878_8
unknown

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4465..4770
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_41878_9
unknown

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comp(4771..4992)
DNA (222bp) protein (74aa)

This feature has no annotations

rifcsphigho2_01_scaffold_41878_10

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comp(4992..5237)
DNA (246bp) protein (82aa)
hypothetical protein n=1 Tax=euryarchaeote SCGC AAA261-E04 RepID=UPI00037CDA24
Marine sediment metagenome DNA, contig: S12H4_L04919 {ECO:0000313|EMBL:GAI81826.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
hit; Protein hit
rifcsphigho2_01_scaffold_41878_11
unknown

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comp(5641..5934)
DNA (294bp) protein (98aa)

This feature has no annotations

rifcsphigho2_01_scaffold_41878_12
CG_Pacearch_03, Pacearchaeota, Archaea

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comp(5960..7642)
DNA (1683bp) protein (561aa)
glycyl-tRNA synthetase, dimeric type; K01880 glycyl-tRNA synthetase [EC:6.1.1.14] Tax=CG_Pacearch_03
glycyl-tRNA synthetase (EC:6.1.1.14)
Glycyl-tRNA synthetase n=1 Tax=Thermofilum pendens (strain Hrk 5) RepID=A1RWW8_THEPD
rifcsphigho2_01_scaffold_41878_13
GWA2_PER_47_7, Peregrinibacteria, Bacteria

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comp(7692..8111)
DNA (420bp) protein (140aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU78348.1}; TaxID=1619058 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWA2_47_7.;"
rifcsphigho2_01_scaffold_41878_14
RIFOXYC1_FULL_Bdellovibrionales_37_79_curated, Bacteroivoracaceae, Bdellovibrionales, Bdellovibrio, Bacteria

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comp(8153..9040)
DNA (888bp) protein (296aa)
Tax=RIFOXYC1_FULL_Bdellovibrionales_37_79_curated
rifcsphigho2_01_scaffold_41878_15
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(9221..13705)
DNA (4485bp) protein (1495aa)
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
id=5048008 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
parallel beta-helix repeat-containing protein
rifcsphigho2_01_scaffold_41878_16
unknown

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comp(13692..13784)
DNA (93bp) protein (31aa)

This feature has no annotations

Displaying 16 items

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