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rifcsphigho2_01_scaffold_47184

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_47184_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(3..1589)
DNA (1587bp) protein (529aa)
Nuclear localization sequence binding protein n=1 Tax=Ogataea parapolymorpha (strain DL-1 / ATCC 26012 / NRRL Y-7560) RepID=E7R271_OGAPD
SLC24A1; solute carrier family 24 (sodium/potassium/calcium exchanger), member 1 Tax=CG_Pacearch_03
rtoA; hypothetical protein
rifcsphigho2_01_scaffold_47184_2
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(1694..1921)
DNA (228bp) protein (76aa)
hypothetical protein n=1 Tax=Candidatus Omnitrophus fodinae SCGC AAA011-A17 RepID=UPI0003B52749
Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_47184_3

Not on your lists

comp(2103..3278)
DNA (1176bp) protein (392aa)
GTPase domain-containing protein {ECO:0000313|EMBL:AIF01515.1}; TaxID=1457885 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_149_F06
Translation-associated GTPase id=5800320 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_47184_4
unknown

Not on your lists

comp(3363..3794)
DNA (432bp) protein (144aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47184_5
unknown

Not on your lists

3995..4558
DNA (564bp) protein (188aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47184_6
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

5134..6057
DNA (924bp) protein (308aa)
Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_47184_7
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

6047..6817
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Halorhabdus tiamatea SARL4B RepID=F7PQU5_9EURY
hypothetical protein Tax=CG_Woesearch_01
hypothetical protein
rifcsphigho2_01_scaffold_47184_8

Not on your lists

comp(6820..7803)
DNA (984bp) protein (328aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037C1C8F
Uncharacterized protein {ECO:0000313|EMBL:AIF01518.1}; TaxID=1457885 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_149_F06.;"
rifcsphigho2_01_scaffold_47184_9
Brachyspira murdochii, Brachyspira, Brachyspirales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

8431..9660
DNA (1230bp) protein (410aa)
squalene synthase n=1 Tax=Brachyspira innocens RepID=UPI000366E04A
squalene/phytoene synthase
Squalene/phytoene synthase {ECO:0000313|EMBL:ADG70991.1}; TaxID=526224 species="Bacteria; Spirochaetes; Brachyspirales; Brachyspiraceae; Brachyspira.;" source="Brachyspira murdochii (strain ATCC 51284
rifcsphigho2_01_scaffold_47184_10
RBG_16_OP11_45_19_curated, Microgenomates, Bacteria

Not on your lists

comp(9664..10134)
DNA (471bp) protein (157aa)
putative fusion protein (N:peptidase-C:desuccinylase) Tax=RBG_16_OP11_45_19_curated
putative fusion protein (N:peptidase-C:desuccinylase) id=51753 bin=ACD40 species=ACD40 genus=ACD40 taxon_order=ACD40 taxon_class=ACD40 phylum=OP11 tax=ACD40 organism_group=OP11 (Microgenomates) organism_desc=OP11
putative fusion protein (N:peptidase-C:desuccinylase)
rifcsphigho2_01_scaffold_47184_11
CG_Cyano_01, Cyanobacteria, Bacteria

Not on your lists

comp(10179..10811)
DNA (633bp) protein (211aa)
Methyltransferase type 11 n=1 Tax=Gloeocapsa sp. PCC 7428 RepID=K9XBB7_9CHRO
Methyltransferase type 11 Tax=CG_Cyano_01
Methyltransferase type 11
rifcsphigho2_01_scaffold_47184_12
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(10841..11029)
DNA (189bp) protein (63aa)
Peptidase S54, rhomboid family protein {ECO:0000313|EMBL:KKP92222.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
rifcsphigho2_01_scaffold_47184_13
GWC1_WS6_36_11, WS6, Bacteria

Not on your lists

comp(11029..11394)
DNA (366bp) protein (122aa)
Peptidase S54, rhomboid family protein {ECO:0000313|EMBL:KKP92222.1}; TaxID=1619090 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWC1_36_11.;"
Peptidase S54, rhomboid family protein id=4688817 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Rhomboid family protein
rifcsphigho2_01_scaffold_47184_14
unknown

Not on your lists

comp(11387..11560)
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47184_15
unknown

Not on your lists

11670..12509
DNA (840bp) protein (280aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47184_16
Methanosarcina mazei, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

12595..13302
DNA (708bp) protein (236aa)
Uncharacterized protein {ECO:0000313|EMBL:KKH59114.1}; TaxID=2209 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina maze
protein of unknown function DUF95 transmembrane; K06384 stage II sporulation protein M id=16383 bin=ACD1 species=ACD1 genus=ACD1 taxon_order=ACD1 taxon_class=ACD1 phylum=OD1-i tax=ACD1 organism_group=OD1-i organism_desc=OD1-i
hypothetical protein
rifcsphigho2_01_scaffold_47184_17
unknown

Not on your lists

13784..13927
DNA (144bp) protein (48aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47184_18
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists


13929..15164
DNA (1236bp) protein (412aa)
hisS; histidyl-tRNA synthetase (EC:6.1.1.21); K01892 histidyl-tRNA synthetase [EC:6.1.1.21] Tax=CG_Pacearch_03
Histidine--tRNA ligase id=5799824 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Histidine-tRNA ligase
rifcsphigho2_01_scaffold_47184_19
unknown

Not on your lists

comp(15161..15487)
DNA (327bp) protein (109aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47184_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(15518..16405)
DNA (888bp) protein (296aa)
Chromosome segregation and condensation protein ScpA n=1 Tax=Candidatus Parvarchaeum acidophilus ARMAN-5 RepID=D6GVZ3_9EURY id=5103660 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein; K05896 segregation and condensation protein A Tax=CG_Pacearch_02
Chromosome segregation and condensation protein ScpA
rifcsphigho2_01_scaffold_47184_21

Not on your lists

16491..17075
DNA (585bp) protein (195aa)
Transcriptional regulator n=1 Tax=sediment metagenome RepID=D9PJD3_9ZZZZ
Transcriptional regulator {ECO:0000313|EMBL:EFK96348.1}; TaxID=749907 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="sediment metagenome.;"
hypothetical protein
rifcsphigho2_01_scaffold_47184_22
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

17072..17503
DNA (432bp) protein (144aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJD2_9ZZZZ
Putative uncharacterized protein Tax=CG_Aenigma_01
rifcsphigho2_01_scaffold_47184_23
unknown

Not on your lists

17648..17911
DNA (264bp) protein (88aa)

This feature has no annotations

rifcsphigho2_01_scaffold_47184_24
AR1, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(17948..18175)
DNA (228bp) protein (76aa)
30S ribosomal protein S27ae n=1 Tax=Thermococcus sp. (strain CGMCC 1.5172 / 4557) RepID=G0HJA0_THES4
hypothetical protein Tax=AR1
30S ribosomal protein S27ae
rifcsphigho2_01_scaffold_47184_25
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(18178..18444)
DNA (267bp) protein (89aa)
30S ribosomal protein S24e Tax=CG_Pacearch_06
Displaying 25 items

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