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rifcsphigho2_01_scaffold_17167_27

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Pacearchaeota_34_23

partial RP 31 / 55 MC: 6 BSCG 19 / 51 MC: 1 ASCG 27 / 38
Location: 21036..21602

Top 3 Functional Annotations

Value Algorithm Source
RNA polymerase II degradation factor 1 n=1 Tax=Clavispora lusitaniae (strain ATCC 42720) RepID=DEF1_CLAL4 similarity UNIREF
DB: UNIREF100
  • Identity: 53.2
  • Coverage: 77.0
  • Bit_score: 68
  • Evalue 9.40e-09
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 53.2
  • Coverage: 77.0
  • Bit_score: 68
  • Evalue 2.90e-09
RNA polymerase II degradation factor 1; TaxID=306902 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Clavispora.;" source="Clav similarity UNIPROT
DB: UniProtKB
  • Identity: 53.2
  • Coverage: 77.0
  • Bit_score: 68
  • Evalue 1.30e-08

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Taxonomy

Clavispora lusitaniae → Clavispora → Saccharomycetales → Saccharomycetes → Ascomycota → Fungi

Sequences

DNA sequence
Length: 567
ATGGGTTTCATAAAAGCAGGTTTCACTGGAGGATTTTTAGGGATAGTAATAAGCATAGCAAACATATTTGTAAATTCAAAAATTCTAGAAAAACTGTCTTCTGTAGGATTGTACGTAGCAAATTTCTTCGGAAAGGCATGCATCAACACTGAAGAAATTCAATGCACTTTAGCACAAAAATTTACAACCATTATGGCAGTAATAGTTGGAAACACAATCGCTTATTTTATAATATTTGCACTAATTAGTATGGGTTTTAGCATAATTAAAATGTGGTTTACTTCAAAGCCAAAAGCGCCAGAAGCAAGTCAGTCAGTACAATCACCACAAGTACAAGAACAACAAGTACCACAACAAACACTACAACAGCCAGTTCAGTTACAACAACCTTTGCCAGTGCAACCGCAACAACAAGTACCACAACAAAGCACACAACAAGTTCAAATAGAACAACCTCAAATTATGCAAGTTCAAATAGAACAACCAGAACAAACACAAGAAAAACAGAAAATCAGAAAAATTTCAAAAAAGAAAGCAAAAATAACTAAGAAATCTAAAAATAAGTAA
PROTEIN sequence
Length: 189
MGFIKAGFTGGFLGIVISIANIFVNSKILEKLSSVGLYVANFFGKACINTEEIQCTLAQKFTTIMAVIVGNTIAYFIIFALISMGFSIIKMWFTSKPKAPEASQSVQSPQVQEQQVPQQTLQQPVQLQQPLPVQPQQQVPQQSTQQVQIEQPQIMQVQIEQPEQTQEKQKIRKISKKKAKITKKSKNK*