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rifcsphigho2_01_scaffold_17167

Search features with annotation key words

Displaying items 1-30 of 52 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_17167_1
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

3..245
DNA (243bp) protein (81aa)
queuine tRNA-ribosyltransferase (EC:2.4.2.29); K00773 queuine tRNA-ribosyltransferase [EC:2.4.2.29] Tax=CG_Pacearch_06
queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Putative queuine tRNA-ribosyltransferase n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5F5_METTP
rifcsphigho2_01_scaffold_17167_2
unknown

Not on your lists

337..1017
DNA (681bp) protein (227aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_3
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

1053..1700
DNA (648bp) protein (216aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000362D490
hypothetical protein; K06930 Tax=RBG_13_Pacearchaeota_36_9_curated
DNA binding protein
rifcsphigho2_01_scaffold_17167_4
unknown

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1736..2212
DNA (477bp) protein (159aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_5

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comp(2475..2714)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=sediment metagenome RepID=D9PJB7_9ZZZZ
Marine sediment metagenome DNA, contig: S06H3_S00525 {ECO:0000313|EMBL:GAI26278.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsphigho2_01_scaffold_17167_6
RBG_13_Deltaproteobacteria_47_9_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2723..3709)
DNA (987bp) protein (329aa)
pyruvate dehydrogenase (acetyl-transferring) (EC:1.2.4.1); K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] Tax=RBG_13_Deltaproteobacteria_47_9_curated
transketolase; K00162 pyruvate dehydrogenase E1 component subunit beta [EC:1.2.4.1] id=5048733 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
pyruvate dehydrogenase E1 component subunit beta (EC:1.2.4.1)
rifcsphigho2_01_scaffold_17167_7
unknown

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comp(3706..4509)
DNA (804bp) protein (268aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_8

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comp(4506..5645)
DNA (1140bp) protein (380aa)
pyruvate dehydrogenase E1 component subunit alpha (EC:1.2.4.4 1.2.4.1)
pyruvate dehydrogenase (acetyl-transferring) E1 component subunit alpha (EC:1.2.4.4); K00161 pyruvate dehydrogenase E1 component subunit alpha [EC:1.2.4.1] id=5241313 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Pyruvate dehydrogenase E1 component subunit alpha {ECO:0000313|EMBL:AJF60304.1}; EC=1.2.4.1 {ECO:0000313|EMBL:AJF60304.1};; EC=1.2.4.4 {ECO:0000313|EMBL:AJF60304.1};; TaxID=1579370 species="Archaea.;"
rifcsphigho2_01_scaffold_17167_9
Thermococcus barophilus, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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comp(5693..6088)
DNA (396bp) protein (132aa)
Ribonuclease VapC {ECO:0000256|HAMAP-Rule:MF_00265}; Short=RNase VapC {ECO:0000256|HAMAP-Rule:MF_00265};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00265};; Putative toxin VapC {ECO:0000256|HAMAP-Rule:MF_
Ribonuclease VapC n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LK77_THEBM
hypothetical protein
rifcsphigho2_01_scaffold_17167_10
unknown

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comp(6067..6324)
DNA (258bp) protein (86aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_11
AR6, Pacearchaeaota, DPANN, Archaea

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comp(6356..6802)
DNA (447bp) protein (149aa)
hypothetical protein Tax=AR6
Putative uncharacterized protein id=3027234 bin=GWC1_CPR2_39_9 species=Kosmotoga olearia genus=Kosmotoga taxon_order=Thermotogales taxon_class=Thermotogae phylum=Thermotogae tax=GWC1_CPR2_39_9 organism_group=CPR2 organism_desc=Good
hypothetical protein
rifcsphigho2_01_scaffold_17167_12
Parcubacteria bacterium GW2011_GWA2_47_9, Parcubacteria, Bacteria

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comp(6806..7063)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1X270_9BACT
Uncharacterized protein {ECO:0000313|EMBL:KKU85979.1}; TaxID=1618849 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_9.;"
hypothetical protein
rifcsphigho2_01_scaffold_17167_13
unknown

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comp(7077..7517)
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_14
unknown

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comp(7521..8000)
DNA (480bp) protein (160aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_15
AR17, Woesearchaeaota, DPANN, Archaea

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8082..8708
DNA (627bp) protein (209aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035ECFAE
hypothetical protein Tax=AR17
Acyl-CoA synthetase NDP forming
rifcsphigho2_01_scaffold_17167_16
Sorangium cellulosum, Sorangium, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8722..12795)
DNA (4074bp) protein (1358aa)
Uncharacterized protein n=1 Tax=Sorangium cellulosum (strain So ce56) RepID=A9FHR2_SORC5
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAN98241.1}; TaxID=448385 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Polyangiaceae; Sorangium.;" source="Sorangium ce
rifcsphigho2_01_scaffold_17167_17
unknown

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comp(12833..13135)
DNA (303bp) protein (101aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_18
CG_Pacearch_02, Pacearchaeota, Archaea

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comp(13142..13960)
DNA (819bp) protein (273aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F17D2
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_17167_19

Not on your lists

comp(14011..16794)
DNA (2784bp) protein (928aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1579364 species="Archaea.;"
sta:STHERM_c15920 isoleucyl-tRNA synthetase (EC:6.1.1.5) id=86757 bin=ACD58 species=ACD58 genus=ACD58 taxon_order=ACD58 taxon_class=ACD58 phylum=ACD58 tax=ACD58 organism_group=ACD58 (Berkelbacteria) organism_desc=ACD58
isoleucyl-tRNA synthetase (EC:6.1.1.5)
rifcsphigho2_01_scaffold_17167_20
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(16836..17081)
DNA (246bp) protein (82aa)
Tax=CG_Pacearch_02
rifcsphigho2_01_scaffold_17167_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(17082..17453)
DNA (372bp) protein (124aa)
guaB; inosine-5'-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5'-monophosphate dehydrogenase n=1 Tax=Nitrososphaera gargensis (strain Ga9.2) RepID=K0IJ19_NITGG
putative signal-transduction protein containing cAMP-binding and CBS domains Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_17167_22

Not on your lists

comp(17488..18039)
DNA (552bp) protein (184aa)
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Methanosaeta concilii (strain ATCC 5969 / DSM 3671 / JCM 10134 / NBRC 103675 / OCM 69 / GP-6) RepID=F4C071_METCG
Uncharacterized protein {ECO:0000313|EMBL:KKK55347.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
ppiB; peptidyl-prolyl cis-trans isomerase
rifcsphigho2_01_scaffold_17167_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(18070..18762)
DNA (693bp) protein (231aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036D2195
transcriptional regulator TrmB Tax=RBG_13_Pacearchaeota_36_9_curated
transcriptional regulator TrmB
rifcsphigho2_01_scaffold_17167_24
unknown

Not on your lists

18882..19358
DNA (477bp) protein (159aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_25
Methanocella arvoryzae, Methanocella, Methanocellales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(19355..19882)
DNA (528bp) protein (176aa)
msrA; methionine sulfoxide reductase A (EC:1.8.4.11)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W0W0_UNCMA
rifcsphigho2_01_scaffold_17167_26
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(19869..20918)
DNA (1050bp) protein (350aa)
tryptophanyl-tRNA synthetase; K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] Tax=CG_Pacearch_02
Tryptophanyl-tRNA synthetase n=1 Tax=Ignicoccus hospitalis (strain KIN4/I / DSM 18386 / JCM 14125) RepID=A8AC25_IGNH4
tryptophanyl-tRNA synthetase
rifcsphigho2_01_scaffold_17167_27
Clavispora lusitaniae, Clavispora, Saccharomycetales, Saccharomycetes, Ascomycota, Fungi

Not on your lists

21036..21602
DNA (567bp) protein (189aa)
RNA polymerase II degradation factor 1 n=1 Tax=Clavispora lusitaniae (strain ATCC 42720) RepID=DEF1_CLAL4
hypothetical protein
RNA polymerase II degradation factor 1; TaxID=306902 species="Eukaryota; Fungi; Dikarya; Ascomycota; Saccharomycotina; Saccharomycetes; Saccharomycetales; Metschnikowiaceae; Clavispora.;" source="Clav
rifcsphigho2_01_scaffold_17167_28
CG_Pacearch_06, Pacearchaeota, Archaea

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comp(21617..22039)
DNA (423bp) protein (141aa)
hypothetical protein Tax=CG_Pacearch_06
seg 6..43 id=56225 bin=ACD43 species=ACD43 genus=ACD43 taxon_order=ACD43 taxon_class=ACD43 phylum=OD1 tax=ACD43 organism_group=OD1 (Parcubacteria) organism_desc=OD1
hypothetical protein
rifcsphigho2_01_scaffold_17167_29
unknown

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comp(22085..22507)
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsphigho2_01_scaffold_17167_30
CG_Pacearch_05, Pacearchaeota, Archaea

Not on your lists

comp(22542..24134)
DNA (1593bp) protein (531aa)
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=CG_Pacearch_05
heavy metal translocating P-type ATPase; K01533 Cu2+-exporting ATPase [EC:3.6.3.4] id=5044090 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
heavy metal translocating P-type ATPase
Displaying items 1-30 of 52 in total

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