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rifcsphigho2_01_scaffold_2431

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_2431_1

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1..483
DNA (483bp) protein (161aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000376AB69
Hit-like protein involved in cell-cycle regulation {ECO:0000313|EMBL:KHO52407.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
histidine triad (HIT) protein
rifcsphigho2_01_scaffold_2431_2
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(480..1316)
DNA (837bp) protein (279aa)
Peptidase A24A prepilin type IV
Peptidase A24A prepilin type IV id=5800557 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Peptidase A24A prepilin type IV Tax=AR15
rifcsphigho2_01_scaffold_2431_3
unknown

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comp(1320..1625)
DNA (306bp) protein (102aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_4
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

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comp(1626..3302)
DNA (1677bp) protein (559aa)
2-polyprenylphenol 6-hydroxylase n=1 Tax=Thermosediminibacter oceani (strain ATCC BAA-1034 / DSM 16646 / JW/IW-1228P) RepID=D9RY50_THEOJ rbh
ABC-1 domain protein {ECO:0000313|EMBL:KKQ17618.1}; TaxID=1618331 species="Bacteria; Berkelbacteria.;" source="Berkelbacteria bacterium GW2011_GWA1_36_9.;"
2-polyprenylphenol 6-hydroxylase
rifcsphigho2_01_scaffold_2431_5
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

3386..4450
DNA (1065bp) protein (355aa)
geranylgeranyl reductase Tax=CG_Pacearch_04
geranylgeranyl reductase id=5050661 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Geranylgeranyl reductase
rifcsphigho2_01_scaffold_2431_6
AR18, Woesearchaeaota, DPANN, Archaea

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4501..5778
DNA (1278bp) protein (426aa)
id=5050665 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_01_scaffold_2431_7
unknown

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5869..6030
DNA (162bp) protein (54aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_8
unknown

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6073..6495
DNA (423bp) protein (141aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_9
CG_Woesearch_02, Woesearchaeota, Archaea

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6703..7656
DNA (954bp) protein (318aa)
id=5800187 Tax=CG_Woesearch_02
id=5800187 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_2431_10

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7698..8951
DNA (1254bp) protein (418aa)
PHP domain protein n=1 Tax=Dictyoglomus turgidum (strain Z-1310 / DSM 6724) RepID=B8E0A1_DICTD id=5103143 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
PHP protein
PHP protein {ECO:0000313|EMBL:AJF62424.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_2431_11
unknown

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9006..9881
DNA (876bp) protein (292aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_12

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comp(9884..10651)
DNA (768bp) protein (256aa)
Uncharacterized protein n=2 Tax=Methanobacterium RepID=K2QFB8_METFO id=5103144 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AJF62425.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_2431_13
AR17, Woesearchaeaota, DPANN, Archaea

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comp(10845..11633)
DNA (789bp) protein (263aa)
Translation initiation factor 2 subunit alpha n=1 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IFN2_ACIB4 id=5103146 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
translation initiation factor 2, alpha subunit; K03237 translation initiation factor 2 subunit 1 Tax=AR17
Translation initiation factor 2 subunit alpha
rifcsphigho2_01_scaffold_2431_14
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(11636..11866)
DNA (231bp) protein (77aa)
30S ribosomal protein S27e n=1 Tax=Candidatus Parvarchaeum acidiphilum ARMAN-4 RepID=D2EEZ2_9EURY id=5103147 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps27e; 30S ribosomal protein S27e; K02978 small subunit ribosomal protein S27e Tax=CG_Woesearch_01
30S ribosomal protein S27e
rifcsphigho2_01_scaffold_2431_15
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(11863..12174)
DNA (312bp) protein (104aa)
LSU ribosomal protein L44E n=1 Tax=nanoarchaeote Nst1 RepID=R1G2S0_9ARCH id=5103148 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
LSU ribosomal protein L44E
rpl44e; 50S ribosomal protein L44E; K02929 large subunit ribosomal protein L44e Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_01_scaffold_2431_16
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(12161..12787)
DNA (627bp) protein (209aa)
hypothetical protein
id=5050691 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Tax=AR18
rifcsphigho2_01_scaffold_2431_17
CG_Micra_06, Micraarchaeota, Archaea

Not on your lists

comp(12836..13948)
DNA (1113bp) protein (371aa)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1); K15635 2,3-bisphosphoglycerate-independent phosphoglycerate mutase [EC:5.4.2.1] Tax=CG_Micra_06
2,3-bisphosphoglycerate-independent phosphoglycerate mutase (EC:5.4.2.1)
Phosphonopyruvate decarboxylase-related protein n=1 Tax=planctomycete KSU-1 RepID=I3IK07_9PLAN
rifcsphigho2_01_scaffold_2431_18

Not on your lists

13993..14979
DNA (987bp) protein (329aa)
tRNA pseudouridine synthase D TruD; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] id=5050697 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tRNA pseudouridine13 synthase {ECO:0000313|EMBL:KHO53366.1}; EC=5.4.99.27 {ECO:0000313|EMBL:KHO53366.1};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
tRNA pseudouridine synthase D TruD
rifcsphigho2_01_scaffold_2431_19

Not on your lists

14999..16021
DNA (1023bp) protein (341aa)
Marine sediment metagenome DNA, contig: S03H2_L00267 {ECO:0000313|EMBL:GAH34806.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
ftsY; signal recognition particle receptor FtsY; K03110 fused signal recognition particle receptor id=5050700 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle GTPase
rifcsphigho2_01_scaffold_2431_20

Not on your lists

16077..16886
DNA (810bp) protein (270aa)
Putative uncharacterized protein id=5041674 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO47926.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsphigho2_01_scaffold_2431_21

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16913..18262
DNA (1350bp) protein (450aa)
signal recognition particle protein Srp54; K03106 signal recognition particle subunit SRP54 id=5050706 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Signal recognition particle 54 kDa protein {ECO:0000256|HAMAP-Rule:MF_00306}; Short=SRP54 {ECO:0000256|HAMAP-Rule:MF_00306};; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
SRP54-type protein, GTPase protein
rifcsphigho2_01_scaffold_2431_22

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18262..18861
DNA (600bp) protein (200aa)
Putative uncharacterized protein n=1 Tax=Nosema ceranae (strain BRL01) RepID=C4V6R8_NOSCE id=5103153 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:KKK79956.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagenome.;"
hypothetical protein
rifcsphigho2_01_scaffold_2431_23
AR4, Woesearchaeaota, DPANN, Archaea

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comp(19401..20195)
DNA (795bp) protein (265aa)
transcriptional regulator TrmB id=5044016 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
transcriptional regulator TrmB Tax=AR4
transcriptional regulator TrmB
rifcsphigho2_01_scaffold_2431_24
unknown

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20280..20861
DNA (582bp) protein (194aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_25
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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20977..21432
DNA (456bp) protein (152aa)
30S ribosomal protein S15 n=1 Tax=Methanocaldococcus vulcanius (strain ATCC 700851 / DSM 12094 / M7) RepID=C9RDM2_METVM
rps15p; 30S ribosomal protein S15
30S ribosomal protein S15 {ECO:0000256|HAMAP-Rule:MF_01343}; TaxID=579137 species="Archaea; Euryarchaeota; Methanococci; Methanococcales; Methanocaldococcaceae; Methanocaldococcus.;" source="Methanoca
rifcsphigho2_01_scaffold_2431_26

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21434..22003
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003738263
30S ribosomal protein S3AE, small subunit ribosomal protein S3Ae {ECO:0000313|EMBL:KHO46642.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
SSU ribosomal protein S3AE
rifcsphigho2_01_scaffold_2431_27
unknown

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22186..22725
DNA (540bp) protein (180aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_28
unknown

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comp(22712..23341)
DNA (630bp) protein (210aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_29
unknown

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comp(23403..23546)
DNA (144bp) protein (48aa)

This feature has no annotations

rifcsphigho2_01_scaffold_2431_30

Not on your lists

23647..23838
DNA (192bp) protein (64aa)
hypothetical protein
id=5103088 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AJF62369.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
Displaying items 1-30 of 32 in total

View Taxonomy