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rifcsphigho2_01_scaffold_28850

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_28850_1
R_OD1_Magasanikbacteria_51_14, Magasanikbacteria, Parcubacteria, Bacteria

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2..295
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Magasanikbacteria_51_14_curated
id=3309827 bin=GWA1_ZB2_49_26 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GWA1_ZB2_49_26 organism_group=ZB2 organism_desc=Good
rifcsphigho2_01_scaffold_28850_2
CG_CPR14_01, CG_CPR14, Bacteria

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292..732
DNA (441bp) protein (147aa)
hypothetical protein
id=3309826 Tax=CG_CPR14_01
transmembrane_regions id=5800415 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_28850_3
AR9, Woesearchaeaota, DPANN, Archaea

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738..1142
DNA (405bp) protein (135aa)
hypothetical protein
seg id=5041713 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Tax=AR9
rifcsphigho2_01_scaffold_28850_4

Not on your lists

1132..1554
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO49668.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
PROKAR_LIPOPROTEIN id=5800408 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsphigho2_01_scaffold_28850_5
AR4, Woesearchaeaota, DPANN, Archaea

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1576..2100
DNA (525bp) protein (175aa)
hypothetical protein
hypothetical protein id=5041717 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
hypothetical protein Tax=AR4
rifcsphigho2_01_scaffold_28850_6
R_OD1_Yanofskybacteria_41_11, Yanofskybacteria, Parcubacteria, Bacteria

Not on your lists

2161..4383
DNA (2223bp) protein (741aa)
copA; copper-(or silver)-translocating P-type ATPase (EC:3.6.3.4); K01533 Cu2+-exporting ATPase [EC:3.6.3.4] Tax=RIFCSPHIGHO2_02_FULL_OD1_Yanofskybacteria_41_11_curated
Cu(2+)-binding/translocating P-type ATPase n=1 Tax=Uncultured methanogenic archaeon RC-I RepID=Q0W4B5_UNCMA id=5103507 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Cu(2+)-binding/translocating P-type ATPase
rifcsphigho2_01_scaffold_28850_7
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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4419..5024
DNA (606bp) protein (202aa)
zinc metalloprotease (EC:3.4.24.-)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037A6A62
peptidase M50 Tax=RBG_13_Woesearchaeota_36_6_curated
rifcsphigho2_01_scaffold_28850_8
R_WOR_2_63_39, WOR-2, Bacteria

Not on your lists

5038..5346
DNA (309bp) protein (103aa)
hypothetical protein n=1 Tax=Pseudomonas fluorescens RepID=UPI00030E058A
dioxygenase, ferredoxin subunit
Tax=RIFCSPHIGHO2_02_FULL_WOR_2_63_39_curated
rifcsphigho2_01_scaffold_28850_9
Roseobacter litoralis, Roseobacter, Rhodobacterales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5291..5908)
DNA (618bp) protein (206aa)
Rieske 2Fe-2S domain protein n=1 Tax=Roseobacter denitrificans (strain ATCC 33942 / OCh 114) RepID=Q16B18_ROSDO
Rieske (2Fe-2S) protein
Putative Rieske (2Fe-2S) protein {ECO:0000313|EMBL:AEI95545.1}; TaxID=391595 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhodobacterales; Rhodobacteraceae; Roseobacter.;" source="Roseobact
rifcsphigho2_01_scaffold_28850_10
R_Bacteroidetes_44_7, Bacteroidetes, Bacteria

Not on your lists

5995..6396
DNA (402bp) protein (134aa)
Uncharacterized protein n=1 Tax=Galbibacter marinus RepID=K2QJN1_9FLAO
hypothetical protein Tax=RIFCSPHIGHO2_02_FULL_Bacteroidetes_44_7_curated
hypothetical protein
rifcsphigho2_01_scaffold_28850_11
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

6408..6908
DNA (501bp) protein (167aa)
Cytochrome c oxidase (B(O/a)3-type) chain II (EC:1.9.3.1)
Uncharacterized protein id=5799602 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein Tax=AR15
rifcsphigho2_01_scaffold_28850_12
GWC1_OD1_43_30, Parcubacteria, Bacteria

Not on your lists

comp(6918..7409)
DNA (492bp) protein (164aa)
Nucleoside 2-deoxyribosyltransferase n=1 Tax=Desulfurispirillum indicum (strain ATCC BAA-1389 / S5) RepID=E6W5P9_DESIS
Nucleoside 2-deoxyribosyltransferase {ECO:0000313|EMBL:KKT14804.1}; TaxID=1618910 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWC1_43_30.;"
nucleoside 2-deoxyribosyltransferase
rifcsphigho2_01_scaffold_28850_13
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists

comp(7425..9371)
DNA (1947bp) protein (649aa)
hjm; Holliday junction migration helicase; K03726 helicase [EC:3.6.4.-] Tax=RBG_16_Micrarchaeota_49_10_curated
ski2-type helicase; K03726 helicase [EC:3.6.4.-] id=5042166 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
ski2-like helicase
Displaying 13 items

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