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rifcsphigho2_01_scaffold_3340

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_3340_1

Not on your lists

comp(344..565)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E987E
Uncharacterized protein {ECO:0000313|EMBL:KHO49666.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
CopG family transcriptional regulator
rifcsphigho2_01_scaffold_3340_2
unknown

Not on your lists

comp(795..1073)
DNA (279bp) protein (93aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_3
RLO_OD1_Magasanikbacteria_43_12, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(1018..1692)
DNA (675bp) protein (225aa)
hypothetical protein
id=5045883 Tax=RIFCSPLOWO2_12_FULL_OD1_Magasanikbacteria_43_12_curated
id=4010372 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
rifcsphigho2_01_scaffold_3340_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1884..2402)
DNA (519bp) protein (173aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus fulgidus (strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC 100126) RepID=O30098_ARCFU id=5103491 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein Tax=CG_Woesearch_02
hypothetical protein
rifcsphigho2_01_scaffold_3340_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

2796..3452
DNA (657bp) protein (219aa)
rnhB; ribonuclease HII (EC:3.1.26.4); K03470 ribonuclease HII [EC:3.1.26.4] Tax=CG_Woesearch_02
RNase HII id=5800606 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Ribonuclease
rifcsphigho2_01_scaffold_3340_6
AR15, Woesearchaeaota, DPANN, Archaea

Not on your lists

3512..6919
DNA (3408bp) protein (1136aa)
Chromosome partition protein Smc Tax=AR15
Chromosome partition protein Smc id=5800619 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
chromosome segregation protein SMC
rifcsphigho2_01_scaffold_3340_7
unknown

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comp(7206..7460)
DNA (255bp) protein (85aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_8
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

7582..8568
DNA (987bp) protein (329aa)
Lrp/AsnC family transcription regulator Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator
Transcriptional regulator id=5240686 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_3340_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(8571..8729)
DNA (159bp) protein (53aa)
HEPN id=5041660 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
HEPN Tax=AR4
rifcsphigho2_01_scaffold_3340_10
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

8898..9638
DNA (741bp) protein (247aa)
3-oxoacyl-[acyl-carrier protein] reductase (EC:1.1.1.100)
Putative 3-oxoacyl-[acyl-carrier-protein] reductase n=1 Tax=Lactobacillus amylolyticus DSM 11664 RepID=D4YRT8_9LACO
oxidoreductase Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_3340_11
unknown

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comp(9780..10157)
DNA (378bp) protein (126aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_12
unknown

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comp(10189..10362)
DNA (174bp) protein (58aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_13
unknown

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comp(10426..10893)
DNA (468bp) protein (156aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_14
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(10936..12198)
DNA (1263bp) protein (421aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037ED6A1
hypothetical protein
Tax=AR18
rifcsphigho2_01_scaffold_3340_15
unknown

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comp(12285..14147)
DNA (1863bp) protein (621aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_16
CG_Woesearch_01, Woesearchaeota, Archaea

Not on your lists

14307..14609
DNA (303bp) protein (101aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035CCC88
id=5046822 Tax=CG_Woesearch_01
rifcsphigho2_01_scaffold_3340_17
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(14833..15903)
DNA (1071bp) protein (357aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003820E23
alpha-L-glutamate ligase; K05844 ribosomal protein S6 modification protein Tax=CG_Woesearch_02
rimK; RimK protein
rifcsphigho2_01_scaffold_3340_18
R_OD1_Falkowbacteria_39_17, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

comp(15900..16235)
DNA (336bp) protein (112aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003763F0C
metalloprotease Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_39_17_curated
rifcsphigho2_01_scaffold_3340_19
unknown

Not on your lists

16436..17443
DNA (1008bp) protein (336aa)
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB id=5102898 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein n=1 Tax=Halalkalicoccus jeotgali (strain DSM 18796 / CECT 7217 / JCM 14584 / KCTC 4019 / B3) RepID=D8JAG4_HALJB Tax=AR20
hypothetical protein
rifcsphigho2_01_scaffold_3340_20

Not on your lists

17641..18594
DNA (954bp) protein (318aa)
Marine sediment metagenome DNA, contig: S01H4_C00691 {ECO:0000313|EMBL:GAG74313.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
NAD-dependent epimerase/dehydratase id=15191510 bin=GWC1_OP11_49_16_COMPLETE species=OP11_3 genus=OP11_3 taxon_order=OP11_3 taxon_class=OP11_3 phylum=OP11 tax=GWC1_OP11_49_16_COMPLETE organism_group=OP11 (Microgenomates)
NAD-dependent epimerase/dehydratase
rifcsphigho2_01_scaffold_3340_21
unknown

Not on your lists

comp(18610..18777)
DNA (168bp) protein (56aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_22
unknown

Not on your lists

comp(18774..19418)
DNA (645bp) protein (215aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_23

Not on your lists

comp(19474..19728)
DNA (255bp) protein (85aa)
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein n=1 Tax=Emticicia oligotrophica (strain DSM 17448 / GPTSA100-15) RepID=I2EPD3_EMTOG id=5103558 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein
4fe-4S ferredoxin IroN-sulfur binding domaiN-containing protein {ECO:0000313|EMBL:AJF62839.1}; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_3340_24
unknown

Not on your lists

comp(19782..20249)
DNA (468bp) protein (156aa)

This feature has no annotations

rifcsphigho2_01_scaffold_3340_25

Not on your lists

comp(20347..22095)
DNA (1749bp) protein (583aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52932.1}; TaxID=1579375 species="Archaea.;" source="archaeon GW2011_AR17.;"
hypothetical protein; K03072 preprotein translocase subunit SecD id=5047439 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
SecD/SecF/SecDF export membrane protein
rifcsphigho2_01_scaffold_3340_26
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(22092..22964)
DNA (873bp) protein (291aa)
Protein translocase subunit SecF Tax=AR17
preprotein translocase subunit SecF; K03074 preprotein translocase subunit SecF id=5045761 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Protein-export membrane protein SecF
rifcsphigho2_01_scaffold_3340_27

Not on your lists

comp(23016..25181)
DNA (2166bp) protein (722aa)
Elongation factor 2 n=6 Tax=Methanocaldococcus RepID=EF2_METJA id=5103761 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Elongation factor 2
Elongation factor 2 {ECO:0000256|HAMAP-Rule:MF_00054, ECO:0000256|SAAS:SAAS00088569}; Short=EF-2 {ECO:0000256|HAMAP-Rule:MF_00054};; TaxID=1579378 species="Archaea.;" source="archaeon GW2011_AR20.;"
rifcsphigho2_01_scaffold_3340_28
CG_Aenigma_01, Aenigmaarchaeota, Archaea

Not on your lists

comp(25224..26003)
DNA (780bp) protein (260aa)
undecaprenol kinase; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=CG_Aenigma_01
Undecaprenyl-diphosphatase n=1 Tax=Methanobacterium sp. (strain SWAN-1) RepID=F6D6W8_METSW
UDP-diphosphatase
Displaying 28 items

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