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rifcsphigho2_01_scaffold_5641

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_5641_1
unknown

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3..311
DNA (309bp) protein (103aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5641_2

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comp(1048..1194)
DNA (147bp) protein (49aa)
Protein containing Glutamate/phenylalanine/leucine/valine dehydrogenase, C-terminal domain {ECO:0000313|EMBL:EFK97627.1}; EC=1.4.1.- {ECO:0000313|EMBL:EFK97627.1};; Flags: Fragment;; TaxID=749907 spec
rifcsphigho2_01_scaffold_5641_3
unknown

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comp(1167..2117)
DNA (951bp) protein (317aa)
Glutamate dehydrogenase (NAD(P)+) n=2 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N5N0_9ARCH Tax=AR20
Glutamate dehydrogenase (NAD(P)+) id=4845865 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
Glutamate dehydrogenase (NADP)+
rifcsphigho2_01_scaffold_5641_4
Peregrinibacteria bacterium GW2011_GWC2_39_14, Peregrinibacteria, Bacteria

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comp(2167..2922)
DNA (756bp) protein (252aa)
zinc/iron permease id=5095699 bin=PER_GWF2_38_29 species=PER_GWF2_38_31 genus=PER_GWF2_38_31 taxon_order=PER_GWF2_38_31 taxon_class=PER_GWF2_38_31 phylum=PER tax=PER_GWF2_38_29 organism_group=PER (Peregrinibacteria)
Zinc/iron permease {ECO:0000313|EMBL:KKR05315.1}; TaxID=1619062 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWC2_39_14.;"
hypothetical protein
rifcsphigho2_01_scaffold_5641_5
unknown

Not on your lists

3184..3624
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5641_6
RBG_13_Deltaproteobacteria_65_10_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(3633..4364)
DNA (732bp) protein (244aa)
Putative membrane protein n=1 Tax=Fervidobacterium pennivorans (strain DSM 9078 / Ven5) RepID=H9UCT7_FERPD
hypothetical protein Tax=RBG_13_Deltaproteobacteria_65_10_curated
hypothetical protein
rifcsphigho2_01_scaffold_5641_7
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4364..4795)
DNA (432bp) protein (144aa)
Uncharacterized protein n=1 Tax=candidate division ZIXI bacterium RBG-1 RepID=T0L7Q8_9BACT
Putative uncharacterized protein Tax=AR11
hypothetical protein
rifcsphigho2_01_scaffold_5641_8
R_OD1_Nomurabacteria_39_10, Nomurabacteria, Parcubacteria, Bacteria

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4866..5315
DNA (450bp) protein (150aa)
Uncharacterized protein n=1 Tax=Methanosaeta thermophila (strain DSM 6194 / PT) RepID=A0B5F7_METTP
hypothetical protein
Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_39_10_curated
rifcsphigho2_01_scaffold_5641_9

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comp(5320..6783)
DNA (1464bp) protein (488aa)
hypothetical protein; K14415 tRNA-splicing ligase RtcB [EC:6.5.1.3] id=5048716 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-splicing ligase RtcB {ECO:0000256|RuleBase:RU371113}; EC=6.5.1.- {ECO:0000256|RuleBase:RU371113};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein
rifcsphigho2_01_scaffold_5641_10
unknown

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comp(6882..7508)
DNA (627bp) protein (209aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5641_11

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comp(7453..7866)
DNA (414bp) protein (138aa)
hypothetical protein id=5044131 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
Uncharacterized protein {ECO:0000313|EMBL:KHO54693.1}; TaxID=1579376 species="Archaea.;" source="archaeon GW2011_AR18.;"
hypothetical protein
rifcsphigho2_01_scaffold_5641_12

Not on your lists

comp(7929..8765)
DNA (837bp) protein (279aa)
Endonuclease IV (EC:3.1.21.2); K01151 deoxyribonuclease IV [EC:3.1.21.2] id=5050433 bin=GW2011_AR5 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=GW2011_AR5 organism_group=Archaea organism_desc=gwa2_.48_18 Replace with curated version!
Deoxyribonuclease IV {ECO:0000313|EMBL:KHO47358.1}; EC=3.1.21.2 {ECO:0000313|EMBL:KHO47358.1};; TaxID=1579367 species="Archaea.;" source="archaeon GW2011_AR5.;"
deoxyribonuclease IV (EC:3.1.21.2)
rifcsphigho2_01_scaffold_5641_13
unknown

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comp(8771..9187)
DNA (417bp) protein (139aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5641_14
Dictyoglomus thermophilum, Dictyoglomus, Dictyoglomales, Dictyoglomia, Dictyoglomi, Bacteria

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comp(9213..10388)
DNA (1176bp) protein (392aa)
Cysteine desulfurase IscS {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00038344}; EC=2.8.1.7 {ECO:0000256|HAMAP-Rule:MF_00331, ECO:0000256|SAAS:SAAS00063383};; TaxID=309799 species="Bacteria
Cysteine desulfurase n=1 Tax=Dictyoglomus thermophilum (strain ATCC 35947 / DSM 3960 / H-6-12) RepID=B5YD31_DICT6
aminotransferase, class V superfamily
rifcsphigho2_01_scaffold_5641_15
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

10439..10732
DNA (294bp) protein (98aa)
Uncharacterized protein Tax=AR17
hypothetical protein id=18248509 bin=AR5_curated_draft species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
PaaD-like protein (DUF59) involved in Fe-S cluster assembly
rifcsphigho2_01_scaffold_5641_16
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

10773..11486
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=delta proteobacterium NaphS2 RepID=D8F9X5_9DELT
Beta-propeller domain-containing protein, methanol dehydrogenase {ECO:0000313|EMBL:KCZ71671.1}; Flags: Precursor;; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Ca
beta-propeller domain-containing protein, methanol dehydrogenase
rifcsphigho2_01_scaffold_5641_17
Candidatus Methanoperedens nitroreducens, Candidatus Methanoperedens, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

11509..12192
DNA (684bp) protein (228aa)
hypothetical protein n=1 Tax=Candidatus Latescibacter anaerobius SCGC AAA252-E07 RepID=UPI0003B3994C
Uncharacterized protein {ECO:0000313|EMBL:KCZ71670.1}; TaxID=1392998 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Candidatus Methanoperedenaceae; Candidatus Methanoperedens.;"
cytoplasmic protein
rifcsphigho2_01_scaffold_5641_18
Marivirga tractuosa, Marivirga, Cytophagales, Cytophagia, Bacteroidetes, Bacteria

Not on your lists

12189..12779
DNA (591bp) protein (197aa)
LemA family protein n=1 Tax=Fulvivirga imtechensis AK7 RepID=L8JVL6_9BACT
lema family protein
LemA family protein {ECO:0000313|EMBL:ADR22182.1}; Flags: Precursor;; TaxID=643867 species="Bacteria; Bacteroidetes; Cytophagia; Cytophagales; Flammeovirgaceae; Marivirga.;" source="Marivirga tractuos
rifcsphigho2_01_scaffold_5641_19
unknown

Not on your lists

13111..14895
DNA (1785bp) protein (595aa)
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=H2IQX9_RAHAC id=5103740 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly n=1 Tax=Rahnella aquatilis (strain ATCC 33071 / DSM 4594 / JCM 1683 / NBRC 105701 / NCIMB 13365 / CIP 78.65) RepID=
Fused permease/ATPase component of ABC transporter involved in Fe-S cluster assembly
rifcsphigho2_01_scaffold_5641_20

Not on your lists

comp(14902..15648)
DNA (747bp) protein (249aa)
sufC; putative ATP-dependent transporter SufC; K09013 Fe-S cluster assembly ATP-binding protein id=5046300 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46101.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
FeS assembly ATPase SufC
rifcsphigho2_01_scaffold_5641_21
Thermaerobacter subterraneus, Thermaerobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15638..16042)
DNA (405bp) protein (135aa)
SUF system FeS assembly protein, NifU family n=1 Tax=Thermaerobacter subterraneus DSM 13965 RepID=K6QDF2_9FIRM
SUF system FeS assembly protein, NifU family {ECO:0000313|EMBL:EKP94706.1}; TaxID=867903 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiales Family XVII. Incertae Sedis; Thermaerob
NifU family SUF system FeS assembly protein
rifcsphigho2_01_scaffold_5641_22
RBG_16_Archaea_50_20_curated, Archaea

Not on your lists

comp(16032..17285)
DNA (1254bp) protein (418aa)
sufS; cysteine desulfurase/selenocysteine lyase (EC:2.8.1.7) Tax=RBG_16_Archaea_50_20_curated
hypothetical protein n=1 Tax=candidate division YNPFFA RepID=UPI0003636CFF
cysteine desulfurase
rifcsphigho2_01_scaffold_5641_23
GWA1_Berkelbacteria_36_10, Berkelbacteria, Bacteria

Not on your lists

comp(17275..18477)
DNA (1203bp) protein (401aa)
FeS assembly protein SufD n=1 Tax=Sphaerobacter thermophilus (strain DSM 20745 / S 6022) RepID=D1C3Z2_SPHTD
SufBD protein Tax=GWA1_Berkelbacteria_36_10
FeS assembly protein SufD
rifcsphigho2_01_scaffold_5641_24
RHI_OD1_Magasanikbacteria_41_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(18498..19985)
DNA (1488bp) protein (496aa)
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB Tax=RIFCSPHIGHO2_12_FULL_OD1_Magasanikbacteria_41_16_curated
FeS assembly protein SufB; K09014 Fe-S cluster assembly protein SufB id=5048371 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
FeS assembly protein SufB
rifcsphigho2_01_scaffold_5641_25
AR5, Aenigmarchaeota, DPANN, Archaea

Not on your lists

comp(20028..20585)
DNA (558bp) protein (186aa)
erpA; iron-sulfur cluster insertion protein erpA id=18248539 bin=AR5_curated_draft species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=AR5_curated_draft organism_group=Archaeon organism_desc=Curated draft
erpA; iron-sulfur cluster insertion protein erpA Tax=AR5
Iron-sulfur cluster assembly accessory protein
rifcsphigho2_01_scaffold_5641_26
CG_Delta_06, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(20587..21009)
DNA (423bp) protein (141aa)
signal transduction histidine kinase Tax=CG_Delta_06
rifcsphigho2_01_scaffold_5641_27
unknown

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comp(21012..21197)
DNA (186bp) protein (62aa)

This feature has no annotations

rifcsphigho2_01_scaffold_5641_28
Dethiobacter alkaliphilus, Dethiobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21283..21855
DNA (573bp) protein (191aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036B8932
Uncharacterized protein {ECO:0000313|EMBL:EEG78950.1}; TaxID=555088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Syntrophomonadaceae; Dethiobacter.;" source="Dethiobacter alkaliphilus AHT
galactoside O-acetyltransferase 3
Displaying 28 items

View Taxonomy