ggKbase home page

rifcsphigho2_01_scaffold_2447_19

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_39_22

partial RP 35 / 55 MC: 2 BSCG 5 / 51 ASCG 30 / 38
Location: comp(17992..18525)

Top 3 Functional Annotations

Value Algorithm Source
integral membrane transport protein; K01975 2'-5' RNA ligase [EC:6.5.1.-] id=5046832 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c similarity UNIREF
DB: UNIREF100
  • Identity: 41.5
  • Coverage: 176.0
  • Bit_score: 142
  • Evalue 3.70e-31
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=1579376 species="A similarity UNIPROT
DB: UniProtKB
  • Identity: 41.5
  • Coverage: 176.0
  • Bit_score: 142
  • Evalue 5.10e-31
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 40.7
  • Coverage: 177.0
  • Bit_score: 138
  • Evalue 2.00e-30

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

archaeon GW2011_AR18 → Archaea

Sequences

DNA sequence
Length: 534
ATGAGACTCTTTGTTGCGGTTCCTCTTCCCATTACAGTTGGAGATATTCTTTTTTCTTTCCAGAAGTCTCTTCGTTCTCTTCCAGCTAAGCTATCCCTTGTTGCAAAAAAGAACCTTCACCTAACTTTAAAGTTCCTTGGCGAGGTTGACGCTCTTCAGCAGGATATAATTTCTTCGCGACTTTCCCAAATTTCTTTTATCCCTTTCTCTCTAAGCATTTCGTCTCTAGGTCTTTTTCCTGGCAACCGCTACCCTCGTGTACTGTGGGTTGGTCTTTCTCCTGAGAAGCCGCTAATTTCTCTGCAACGCCAGATTGATGAAACTCTTCTTGATCTTTTCCCTACAACTACTTCTTTTTCTGCACACCTCACCTTAGCCCGTGTTCGTCTACTAAAAGATCCAAAAACGTTTTCAGAGACCTTTTCTTCTCTAGAATCCCCTTCCACTTCTTTTCAAGTCTCTTCTTTCTGTCTTTATTCTAGTATTTTGCGCCCTTCAGGACCTACTCATAGAATTCTTGAAACTTATGCCTAA
PROTEIN sequence
Length: 178
MRLFVAVPLPITVGDILFSFQKSLRSLPAKLSLVAKKNLHLTLKFLGEVDALQQDIISSRLSQISFIPFSLSISSLGLFPGNRYPRVLWVGLSPEKPLISLQRQIDETLLDLFPTTTSFSAHLTLARVRLLKDPKTFSETFSSLESPSTSFQVSSFCLYSSILRPSGPTHRILETYA*