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rifcsphigho2_01_scaffold_16250

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_16250_1
unknown

Not on your lists

comp(3..137)
DNA (135bp) protein (45aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16250_2
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

150..827
DNA (678bp) protein (226aa)
tRNA-splicing endonuclease subunit alpha; K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=RBG_13_Woesearchaeota_36_6_curated
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
rifcsphigho2_01_scaffold_16250_3
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

921..2090
DNA (1170bp) protein (390aa)
hypothetical protein
id=5103053 Tax=CG_Woesearch_03
seg id=5041810 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsphigho2_01_scaffold_16250_4

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2112..3152
DNA (1041bp) protein (347aa)
Flap endonuclease 1 {ECO:0000256|HAMAP-Rule:MF_00614}; Short=FEN-1 {ECO:0000256|HAMAP-Rule:MF_00614};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00614};; Flap structure-specific endonuclease 1 {ECO:000025
rad2; flap endonuclease-1; K04799 flap endonuclease-1 [EC:3.-.-.-] id=5046346 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
endonuclease
rifcsphigho2_01_scaffold_16250_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(3167..3685)
DNA (519bp) protein (173aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037D880D
hypothetical protein Tax=RBG_13_Pacearchaeota_36_9_curated
HEPN domain-containing protein
rifcsphigho2_01_scaffold_16250_6
unknown

Not on your lists

comp(3682..4299)
DNA (618bp) protein (206aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16250_7
Microgenomates bacterium GW2011_GWC1_38_12, Microgenomates, Bacteria

Not on your lists

4511..5533
DNA (1023bp) protein (341aa)
Uncharacterized protein {ECO:0000313|EMBL:KKQ52502.1}; TaxID=1618512 species="Bacteria; Microgenomates.;" source="Microgenomates bacterium GW2011_GWC1_38_12.;"
transmembrane_regions 7..29 id=43575 bin=ACD38 species=ACD38 genus=ACD38 taxon_order=ACD38 taxon_class=ACD38 phylum=OP11 tax=ACD38 organism_group=OP11 (Microgenomates) organism_desc=OP11
rifcsphigho2_01_scaffold_16250_8
Parcubacteria bacterium GW2011_GWA2_47_9, Parcubacteria, Bacteria

Not on your lists

5530..6723
DNA (1194bp) protein (398aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU85812.1}; TaxID=1618849 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_47_9.;"
Metallo-dependent hydrolases id=52961 bin=ACD41 species=ACD41 genus=ACD41 taxon_order=ACD41 taxon_class=ACD41 phylum=OD1 tax=ACD41 organism_group=OD1 (Parcubacteria) organism_desc=OD1
rifcsphigho2_01_scaffold_16250_9
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

7059..8390
DNA (1332bp) protein (444aa)
Tax=AR17
rifcsphigho2_01_scaffold_16250_10
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(8481..8777)
DNA (297bp) protein (99aa)
hypothetical protein Tax=CG_Micra_03
hypothetical protein
hypothetical protein id=5241034 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsphigho2_01_scaffold_16250_11
CG_Micra_03, Micraarchaeota, Archaea

Not on your lists

comp(8762..8968)
DNA (207bp) protein (69aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003680118
hypothetical protein Tax=CG_Micra_03
hypothetical protein
rifcsphigho2_01_scaffold_16250_12

Not on your lists

9101..10123
DNA (1023bp) protein (341aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO50081.1}; TaxID=1579369 species="Archaea.;" source="archaeon GW2011_AR9.;"
Met-10+ protein id=5800111 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_16250_13
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

10253..10870
DNA (618bp) protein (206aa)
hypothetical protein
id=5102959 Tax=RBG_13_Pacearchaeota_36_9_curated
id=5102959 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rifcsphigho2_01_scaffold_16250_14
CG_Woesearch_03, Woesearchaeota, Archaea

Not on your lists

10867..11517
DNA (651bp) protein (217aa)
ArsR family transcription regulator n=1 Tax=Natronomonas moolapensis 8.8.11 RepID=M1XRD6_9EURY id=5102960 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
ArsR family transcription regulator
ArsR family transcription regulator Tax=CG_Woesearch_03
rifcsphigho2_01_scaffold_16250_15
CG_Micra_05, Micraarchaeota, Archaea

Not on your lists

11678..12943
DNA (1266bp) protein (422aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036AEC1E
putative ATPase (AAA+ superfamily) Tax=CG_Micra_05
hypothetical protein
rifcsphigho2_01_scaffold_16250_16
unknown

Not on your lists

comp(13093..13446)
DNA (354bp) protein (118aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16250_17
unknown

Not on your lists

comp(13466..14089)
DNA (624bp) protein (208aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16250_18
RBG_13_Bathyarchaeota_52_12_curated, Bathyarchaeota, Archaea

Not on your lists

14238..14642
DNA (405bp) protein (135aa)
PadR family transcriptional regulator Tax=RBG_13_Bathyarchaeota_52_12_curated
rifcsphigho2_01_scaffold_16250_19
R_OD1_Falkowbacteria_45_15, Falkowbacteria, Parcubacteria, Bacteria

Not on your lists

14611..18648
DNA (4038bp) protein (1346aa)
UPI0003D1AA95 related cluster n=1 Tax=unknown RepID=UPI0003D1AA95
periplasmic copper-binding protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Falkowbacteria_45_15_curated
hypothetical protein
rifcsphigho2_01_scaffold_16250_20
AR20, Woesearchaeaota, DPANN, Archaea

Not on your lists

18733..19116
DNA (384bp) protein (128aa)
hypothetical protein
id=5103514 bin=GW2011_AR20_complete species=unknown genus=unknown taxon_order=unknown taxon_class=unknown phylum=unknown tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Tax=AR20
rifcsphigho2_01_scaffold_16250_21
unknown

Not on your lists

comp(19176..19325)
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsphigho2_01_scaffold_16250_22
GWF2_OD1_38_8, Parcubacteria, Bacteria

Not on your lists

19645..19926
DNA (282bp) protein (94aa)
hypothetical protein HlacAJ_12734 Tax=GWF2_OD1_38_8
rifcsphigho2_01_scaffold_16250_23
CG_Pacearch_02, Pacearchaeota, Archaea

Not on your lists

comp(19979..21040)
DNA (1062bp) protein (354aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000363A152
hypothetical protein Tax=CG_Pacearch_02
hypothetical protein
rifcsphigho2_01_scaffold_16250_24
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

Not on your lists

comp(21137..21643)
DNA (507bp) protein (169aa)
Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
Displaying 24 items

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