ggKbase home page

rifcsphigho2_01_scaffold_25368_2

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_48_23

near complete RP 33 / 55 MC: 6 BSCG 6 / 51 MC: 1 ASCG 32 / 38
Location: comp(114..572)

Top 3 Functional Annotations

Value Algorithm Source
rpl30p; 50S ribosomal protein L30P; K02907 large subunit ribosomal protein L30 Tax=CG_Woesearch_01 similarity UNIPROT
DB: UniProtKB
  • Identity: 53.5
  • Coverage: 142.0
  • Bit_score: 162
  • Evalue 4.10e-37
50S ribosomal protein L30P id=5800042 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized similarity UNIREF
DB: UNIREF100
  • Identity: 46.2
  • Coverage: 160.0
  • Bit_score: 148
  • Evalue 5.80e-33
rpl30p; 50S ribosomal protein L30 similarity KEGG
DB: KEGG
  • Identity: 47.1
  • Coverage: 153.0
  • Bit_score: 128
  • Evalue 1.30e-27

Lists

This feature is not on any list.

Notes

This feature has no notes.

Taxonomy

CG_Woesearch_01 → Woesearchaeota → Archaea

Sequences

DNA sequence
Length: 459
ATGGCAAATACTCCTGCTGCGGAAAAGAACTCCAAGAAACTGGCTATTGTTTTAGTCCGCGGTGTTGCCAAAGGGCGGGAGGTCGTCAAAGGGACGCTGCGCTTGCTCCGCCTGGATCGCAAGAACCATTGCGTTGTCGTTGCCGACACGCCCAGTGTACGGGGCATGCTGCAGCAAGCTAAGGATTATCTGACGTGGGGAGAGATTACTTCAGATATGGAAAAAGAGCTGGTCGAAAAGCGGGGGCAGCTGTATCAGGGAAGGCTAACGGATACCAAAGGGAAATATACCTATCATCGTGCGTTCGACTACAACGGCAAAAAGTACAAGCCGTATTTTGCCTTGCAGCCGCCGCAGAAAGGTTTTGGCCGGAAAGGCATCAAAGTCGCTTTCCGGGCGGGTGGCACTCTTGGTTACCGGGGCGAGAAGATGAATGATTTGTTGAAGAGGATGCTATAA
PROTEIN sequence
Length: 153
MANTPAAEKNSKKLAIVLVRGVAKGREVVKGTLRLLRLDRKNHCVVVADTPSVRGMLQQAKDYLTWGEITSDMEKELVEKRGQLYQGRLTDTKGKYTYHRAFDYNGKKYKPYFALQPPQKGFGRKGIKVAFRAGGTLGYRGEKMNDLLKRML*