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rifcsphigho2_01_scaffold_46478_3

Organism: RIFCSPHIGHO2_01_FULL_Archaea_Woesearchaeota_48_23

near complete RP 33 / 55 MC: 6 BSCG 6 / 51 MC: 1 ASCG 32 / 38
Location: comp(1993..2550)

Top 3 Functional Annotations

Value Algorithm Source
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=579137 species="Ar similarity UNIPROT
DB: UniProtKB
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 135
  • Evalue 6.60e-29
2'-5' RNA ligase id=2636969 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria) similarity UNIREF
DB: UNIREF100
  • Identity: 41.2
  • Coverage: 182.0
  • Bit_score: 136
  • Evalue 3.60e-29
2'-5' RNA ligase similarity KEGG
DB: KEGG
  • Identity: 40.9
  • Coverage: 176.0
  • Bit_score: 135
  • Evalue 1.30e-29

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Taxonomy

Methanocaldococcus vulcanius → Methanocaldococcus → Methanococcales → Methanococci → Euryarchaeota → Archaea

Sequences

DNA sequence
Length: 558
ATGAAGAAACGGTTGTTTGTGGGCGTTCCGCTTTCTCCGGAAGTAAAGCAGGCGATAGCGGAGCAGTTGCTTACGCTTCTGCAGCAGAGCGGGGCGGACTTGCATCTGGTTACTGCTGAACAGCTTCATTTCACGCTGAAATTTCTGGGGGAGGTGGACGAGAGCCAGATCGAACGAGTGAAAGAGATTCTTCGGGAAGTGGCTGCTTCCCGGCAGCCTTTTCTGGTCCGCTTGCAGAACGTTGGCGTGTTTCCTTCGCCGGAATATATGCGAGTCATCTGGGTTGGCGTGGAAAACGGCGATTTGCCGGTACTCATGAAAGAGTTGGATGAGCAGCTGGGCTTTATCTGCAAGAATGAGCAGGAGGAAAAGCCGCATGTGACGCTGGCTCGCGTTAAATCCAAAAAGAACAAAGAGCAGTTGCAGCAATTTGTTACAAAATTTCAGCAGATGGCTTTTGGCGAGATGCGGGTTACGGAGCTGGTTTTGTATGAGAGTACGTTAACGACGGAAGGGGCGCGGTATGAGGTGGTGGGGAGGTTTGGATTGGTTGAGTAA
PROTEIN sequence
Length: 186
MKKRLFVGVPLSPEVKQAIAEQLLTLLQQSGADLHLVTAEQLHFTLKFLGEVDESQIERVKEILREVAASRQPFLVRLQNVGVFPSPEYMRVIWVGVENGDLPVLMKELDEQLGFICKNEQEEKPHVTLARVKSKKNKEQLQQFVTKFQQMAFGEMRVTELVLYESTLTTEGARYEVVGRFGLVE*