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rifcsphigho2_01_scaffold_46478

Search features with annotation key words

Displaying 8 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_46478_1
unknown

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comp(2..526)
DNA (525bp) protein (175aa)

This feature has no annotations

rifcsphigho2_01_scaffold_46478_2
unknown

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comp(523..1839)
DNA (1317bp) protein (439aa)

This feature has no annotations

rifcsphigho2_01_scaffold_46478_3
Methanocaldococcus vulcanius, Methanocaldococcus, Methanococcales, Methanococci, Euryarchaeota, Archaea

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comp(1993..2550)
DNA (558bp) protein (186aa)
RNA 2',3'-cyclic phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01940}; Short=RNA 2',3'-CPDase {ECO:0000256|HAMAP-Rule:MF_01940};; EC=3.1.4.- {ECO:0000256|HAMAP-Rule:MF_01940};; TaxID=579137 species="Ar
2'-5' RNA ligase id=2636969 bin=PER_GWC2_41_7 species=GW2011_AR5 genus=GW2011_AR5 taxon_order=GW2011_AR5 taxon_class=GW2011_AR5 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
2'-5' RNA ligase
rifcsphigho2_01_scaffold_46478_4
CG_Woesearch_03, Woesearchaeota, Archaea

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comp(2584..2931)
DNA (348bp) protein (116aa)
deoxyribonuclease/rho motif-like TRAM protein Tax=CG_Woesearch_03
Putative RNA-binding protein, contains TRAM domain id=5800293 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_46478_5
CG_PER_03, Peregrinibacteria, Bacteria

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comp(3032..4774)
DNA (1743bp) protein (581aa)
ABC-type multidrug transport system, ATPase and permease component Tax=CG_PER_03
msv:Mesil_1001 ABC transporter related protein; K06147 ATP-binding cassette, subfamily B, bacterial id=137753 bin=ACD9 species=ACD9 genus=ACD9 taxon_order=ACD9 taxon_class=ACD9 phylum=OD1-i tax=ACD9 organism_group=OD1-i organism_desc=OD1-i
ABC transporter permease/ATP-binding protein
rifcsphigho2_01_scaffold_46478_6
RBG_13_Deltaproteobacteria_61_14_curated, Deltaproteobacteria, Proteobacteria, Bacteria

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4869..6020
DNA (1152bp) protein (384aa)
Putative uncharacterized protein n=1 Tax=Selenomonas noxia F0398 RepID=G5H3S8_9FIRM
hypothetical protein Tax=RBG_13_Deltaproteobacteria_61_14_curated
Nucleoside-diphosphate-sugar epimerases
rifcsphigho2_01_scaffold_46478_7

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comp(6036..6893)
DNA (858bp) protein (286aa)
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579374 species="Archaea.;" source="archaeon GW2011_AR16.;"
DNA repair and recombination protein RadA id=5800292 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA repair and recombination protein RadA
rifcsphigho2_01_scaffold_46478_8

Not on your lists

comp(6893..7180)
DNA (288bp) protein (96aa)
hypothetical protein
id=5046763 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45951.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Displaying 8 items

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