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rifcsphigho2_01_scaffold_13101

Search features with annotation key words

Displaying items 1-30 of 41 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_13101_1
RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(152..1168)
DNA (1017bp) protein (339aa)
Transposase, similar to IS885 n=1 Tax=Aromatoleum aromaticum (strain EbN1) RepID=Q5NWF7_AROAE
transposase Tax=RIFOXYB2_FULL_Gammaproteobacteria_38_6_curated
Transposase, IS885 family
rifcsphigho2_01_scaffold_13101_2
unknown

Not on your lists

comp(1277..1993)
DNA (717bp) protein (239aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_3
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

2068..2826
DNA (759bp) protein (253aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E2F5F
transcriptional regulator TrmB Tax=CG_Micra_02
putative transcriptional regulator
rifcsphigho2_01_scaffold_13101_4
unknown

Not on your lists

comp(3361..4434)
DNA (1074bp) protein (358aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_5
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(4489..4872)
DNA (384bp) protein (128aa)
Uncharacterized protein (Fragment) n=1 Tax=human gut metagenome RepID=K1TIP6_9ZZZZ
hypothetical protein Tax=AR17
hypothetical protein
rifcsphigho2_01_scaffold_13101_6
unknown

Not on your lists

comp(4876..5019)
DNA (144bp) protein (48aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_7
unknown

Not on your lists

comp(5016..5174)
DNA (159bp) protein (53aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_8
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(5171..5482)
DNA (312bp) protein (104aa)
Tax=AR17
rifcsphigho2_01_scaffold_13101_9
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

6099..7295
DNA (1197bp) protein (399aa)
hypothetical protein; K06942 Tax=RBG_13_Pacearchaeota_33_26_curated
Translation-associated GTPase id=5800320 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsphigho2_01_scaffold_13101_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(7501..9543)
DNA (2043bp) protein (681aa)
Marine sediment metagenome DNA, contig: S01H1_S23427 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_13101_11
AR13, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(9631..9882)
DNA (252bp) protein (84aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00035C8224
RelE protein Tax=AR13
RelE protein
rifcsphigho2_01_scaffold_13101_12
CG_Pacearch_01, Pacearchaeota, Archaea

Not on your lists

comp(9886..10122)
DNA (237bp) protein (79aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000368D0B6
hypothetical protein Tax=CG_Pacearch_01
rifcsphigho2_01_scaffold_13101_13
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

10211..11347
DNA (1137bp) protein (379aa)
tryptophanyl-tRNA synthetase (EC:6.1.1.2); K01867 tryptophanyl-tRNA synthetase [EC:6.1.1.2] id=5049690 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
tryptophanyl-tRNA synthetase Tax=CG_Pacearch_04
Tryptophan-tRNA ligase
rifcsphigho2_01_scaffold_13101_14
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

comp(11352..11927)
DNA (576bp) protein (192aa)
Hypothetical phage-related protein n=1 Tax=Pseudomonas fluorescens (strain SBW25) RepID=C3KA74_PSEFS
hypothetical protein
Tax=CG_Pacearch_06
rifcsphigho2_01_scaffold_13101_15
unknown

Not on your lists

comp(11929..12210)
DNA (282bp) protein (94aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_16

Not on your lists

12250..13635
DNA (1386bp) protein (462aa)
Glutamyl-tRNA(Gln) amidotransferase subunit D {ECO:0000256|RuleBase:RU004457}; EC=6.3.5.- {ECO:0000256|RuleBase:RU004457};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
Glutamyl-tRNA(Gln) amidotransferase subunit D n=1 Tax=Thermococcus kodakaraensis (strain ATCC BAA-918 / JCM 12380 / KOD1) RepID=GATD_THEKO
glutamyl-tRNA(Gln) amidotransferase subunit D
rifcsphigho2_01_scaffold_13101_17
R_OD1_Nomurabacteria_40_20, Nomurabacteria, Parcubacteria, Bacteria

Not on your lists

13652..14158
DNA (507bp) protein (169aa)
histidine phosphatase superfamily (branch 1); K15634 probable phosphoglycerate mutase [EC:5.4.2.1] Tax=RIFCSPHIGHO2_01_FULL_OD1_Nomurabacteria_40_20_curated
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y5V1_9BACT
Phosphoglycerate mutase
rifcsphigho2_01_scaffold_13101_18
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14262..14510)
DNA (249bp) protein (83aa)
hypothetical protein Tax=AR19
hypothetical protein id=5048510 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsphigho2_01_scaffold_13101_19
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(14504..14773)
DNA (270bp) protein (90aa)
AbrB family transcriptional regulator Tax=AR6
AbrB family transcriptional regulator id=5048509 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
AbrB family transcriptional regulator
rifcsphigho2_01_scaffold_13101_20
RBG_16_Zixibacteria_53_22_curated, Zixibacteria, Bacteria

Not on your lists

comp(14873..15184)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Methanolobus psychrophilus R15 RepID=K4MJZ9_9EURY
hypothetical protein
hypothetical protein Tax=RBG_16_Zixibacteria_53_22_curated
rifcsphigho2_01_scaffold_13101_21
RBG_13_Pacearchaeota_33_26_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

15281..16123
DNA (843bp) protein (281aa)
Marine sediment metagenome DNA, contig: S01H1_S34845 Tax=RBG_13_Pacearchaeota_33_26_curated
rifcsphigho2_01_scaffold_13101_22

Not on your lists

16160..17638
DNA (1479bp) protein (493aa)
Glutamyl-tRNA(Gln) amidotransferase subunit E {ECO:0000313|EMBL:KHO54799.1}; EC=6.3.5.7 {ECO:0000313|EMBL:KHO54799.1};; TaxID=1579377 species="Archaea.;" source="archaeon GW2011_AR19.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A24E7
Glutamyl-tRNA(Gln) amidotransferase subunit E
rifcsphigho2_01_scaffold_13101_23
unknown

Not on your lists

17671..18012
DNA (342bp) protein (114aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_24
unknown

Not on your lists

comp(18166..18501)
DNA (336bp) protein (112aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_25
RBG_16_Micrarchaeota_49_10_curated, Micrarchaeota, Archaea

Not on your lists


18776..20095
DNA (1320bp) protein (440aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_16_Micrarchaeota_49_10_curated
Aspartyl/asparaginyl-tRNA synthetase n=2 Tax=mine drainage metagenome RepID=T1CHU7_9ZZZZ
hypothetical protein
rifcsphigho2_01_scaffold_13101_26
unknown

Not on your lists

20102..21031
DNA (930bp) protein (310aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_27
RBG_13_RIF_OD1_08_41_18_curated, RIF-OD1-8, Parcubacteria, Bacteria

Not on your lists


21093..22403
DNA (1311bp) protein (437aa)
aspS; aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=RBG_13_RIF_OD1_08_41_18_curated
aspartyl-tRNA synthetase, archaeal type (EC:6.1.1.12)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003713952
rifcsphigho2_01_scaffold_13101_28
R_OP11_Roizmanbacteria_38_11, Roizmannbacteria, Microgenomates, Bacteria

Not on your lists

22610..24034
DNA (1425bp) protein (475aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=RIFCSPHIGHO2_02_FULL_OP11_Roizmanbacteria_38_11_curated
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000372F34D
asparaginyl-tRNA synthetase
rifcsphigho2_01_scaffold_13101_29
unknown

Not on your lists

24031..24132
DNA (102bp) protein (34aa)

This feature has no annotations

rifcsphigho2_01_scaffold_13101_30
unknown

Not on your lists

24300..24851
DNA (552bp) protein (184aa)

This feature has no annotations

Displaying items 1-30 of 41 in total

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