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rifcsphigho2_01_scaffold_11549

Search features with annotation key words

Displaying items 1-30 of 33 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsphigho2_01_scaffold_11549_1
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(226..525)
DNA (300bp) protein (100aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K2EK09_9BACT
Uncharacterized protein Tax=CG_Pacearch_03
rifcsphigho2_01_scaffold_11549_2
unknown

Not on your lists

comp(625..1149)
DNA (525bp) protein (175aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_3
RBG_13_OD1_48_8_curated, Parcubacteria, Bacteria

Not on your lists

1267..2079
DNA (813bp) protein (271aa)
bacitracin resistance protein BacA; K06153 undecaprenyl-diphosphatase [EC:3.6.1.27] Tax=RBG_13_OD1_48_8_curated
Undecaprenyl-diphosphatase id=4788841 bin=GWA2_OP3_53_43 species=Methanococcoides burtonii genus=Methanococcoides taxon_order=Methanosarcinales taxon_class=Methanomicrobia phylum=Euryarchaeota tax=GWA2_OP3_53_43 organism_group=OP3 (Omnitrophica) organism_desc=Was designated as curated version. Not curated. rp block places as OP3
bacitracin resistance protein BacA
rifcsphigho2_01_scaffold_11549_4
unknown

Not on your lists

2081..2263
DNA (183bp) protein (61aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_5
unknown

Not on your lists

comp(2624..3361)
DNA (738bp) protein (246aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_6

Not on your lists

comp(3447..3791)
DNA (345bp) protein (115aa)
Protein of unknown function DUF2283 id=5043585 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46561.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsphigho2_01_scaffold_11549_7
unknown

Not on your lists

comp(3794..3958)
DNA (165bp) protein (55aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_8
unknown

Not on your lists

comp(4380..4592)
DNA (213bp) protein (71aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_9
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(4631..5629)
DNA (999bp) protein (333aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_11549_10
unknown

Not on your lists

comp(6077..6751)
DNA (675bp) protein (225aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_11
unknown

Not on your lists

comp(6751..7563)
DNA (813bp) protein (271aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_12
unknown

Not on your lists

comp(7762..8106)
DNA (345bp) protein (115aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_13
unknown

Not on your lists

8367..8831
DNA (465bp) protein (155aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_14

Not on your lists

comp(9314..9697)
DNA (384bp) protein (128aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003624628
DoxX family protein {ECO:0000313|EMBL:EKE20435.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
DoxX family protein
rifcsphigho2_01_scaffold_11549_15
R_OD1_44_24, Parcubacteria, Bacteria

Not on your lists

9776..10246
DNA (471bp) protein (157aa)
Blue (Type 1) copper domain protein n=1 Tax=Methanohalobium evestigatum (strain DSM 3721 / OCM 161 / Z-7303) RepID=D7E936_METEZ id=5103245 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
plastocyanin Tax=RIFCSPLOWO2_01_FULL_OD1_44_24_curated
Blue (Type 1) copper protein
rifcsphigho2_01_scaffold_11549_16

Not on your lists

comp(10510..11934)
DNA (1425bp) protein (475aa)
Dead box RNA helicase n=2 Tax=Methanococcoides burtonii RepID=Q12UP5_METBU
Uncharacterized protein {ECO:0000313|EMBL:KHO48799.1}; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
DEAD/DEAH box helicase-like protein
rifcsphigho2_01_scaffold_11549_17
unknown

Not on your lists

comp(12050..12742)
DNA (693bp) protein (231aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_18
unknown

Not on your lists

comp(13018..13428)
DNA (411bp) protein (137aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_19
CG_Pacearch_06, Pacearchaeota, Archaea

Not on your lists

13537..14697
DNA (1161bp) protein (387aa)
Tyrosine--tRNA ligase n=1 Tax=Thermococcus sibiricus (strain MM 739 / DSM 12597) RepID=SYY_THESM
tyrosyl-tRNA synthetase Tax=CG_Pacearch_06
tyrosyl-tRNA synthetase
rifcsphigho2_01_scaffold_11549_20
GWF2_WS6_complete_39_15, WS6, Bacteria

Not on your lists

15155..15478
DNA (324bp) protein (108aa)
RNA-binding protein RNP-2 id=5099591 bin=WS6_GWF2_39_15 species=WS6_CLOSED genus=WS6_CLOSED taxon_order=WS6_CLOSED taxon_class=WS6_CLOSED phylum=WS6 tax=WS6_GWF2_39_15 organism_group=WS6 (Doikabacteria) organism_desc=replace with complete version
RNA recognition motif-containing protein {ECO:0000313|EMBL:KKR06376.1}; TaxID=1619100 species="Bacteria; candidate division WS6.;" source="candidate division WS6 bacterium GW2011_GWF2_39_15.;"
RNA-binding protein
rifcsphigho2_01_scaffold_11549_21
Methanosarcina barkeri, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

15592..15897
DNA (306bp) protein (102aa)
Nuclear protein SET n=1 Tax=Candidatus Micrarchaeum acidiphilum ARMAN-2 RepID=C7DH11_9EURY id=5103037 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Uncharacterized protein {ECO:0000313|EMBL:AKB82088.1}; TaxID=1434107 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" source="Methanosarcina b
hypothetical protein
rifcsphigho2_01_scaffold_11549_22
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(15974..16285)
DNA (312bp) protein (104aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_11549_23
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(16264..17097)
DNA (834bp) protein (278aa)
Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsphigho2_01_scaffold_11549_24
unknown

Not on your lists

comp(17203..17652)
DNA (450bp) protein (150aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_25
unknown

Not on your lists

17985..18575
DNA (591bp) protein (197aa)

This feature has no annotations

rifcsphigho2_01_scaffold_11549_26
RBG_13_WOR_2_41_10_curated, WOR-2, Bacteria

Not on your lists

18864..19448
DNA (585bp) protein (195aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037322E7 rbh
hypothetical protein
hypothetical protein Tax=RBG_13_WOR_2_41_10_curated
rifcsphigho2_01_scaffold_11549_27

Not on your lists

19429..19905
DNA (477bp) protein (159aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036A6D1A
Marine sediment metagenome DNA, contig: S01H4_S02303 {ECO:0000313|EMBL:GAG77654.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
hypothetical protein
rifcsphigho2_01_scaffold_11549_28
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

20113..21264
DNA (1152bp) protein (384aa)
Multi-drug resistance protein Tax=RBG_13_Pacearchaeota_36_9_curated
major facilitator superfamily protein; K08161 MFS transporter, DHA1 family, multidrug resistance protein id=5091436 bin=GWC2_PER_33_13 species=PER_GWC2_33_13 genus=PER_GWC2_33_13 taxon_order=PER_GWC2_33_13 taxon_class=PER_GWC2_33_13 phylum=PER tax=GWC2_PER_33_13 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
MFS transporter
rifcsphigho2_01_scaffold_11549_29
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21511..21906)
DNA (396bp) protein (132aa)
PIN domain-containing protein Tax=AR17
Putative PIN domain protein id=4379347 bin=PER_GWC2_41_7 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
PIN protein
rifcsphigho2_01_scaffold_11549_30
AR17, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(21875..22105)
DNA (231bp) protein (77aa)
Tax=AR17
Displaying items 1-30 of 33 in total

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