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rifcsplowo2_01_scaffold_3261

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_3261_1
R_RIF_OD1_07_49_22b, RIF-OD1-7, Parcubacteria, Bacteria

Not on your lists

comp(3..518)
DNA (516bp) protein (172aa)
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] Tax=RIFCSPHIGHO2_01_FULL_RIF_OD1_07_49_22b_curated
glutamate dehydrogenase (NADP)+ (EC:1.4.1.3)
glutamate dehydrogenase (NAD(P)(+)) (EC:1.4.1.3); K00261 glutamate dehydrogenase (NAD(P)+) [EC:1.4.1.3] id=5240704 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
rifcsplowo2_01_scaffold_3261_2
CG_Pacearch_04, Pacearchaeota, Archaea

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comp(534..1316)
DNA (783bp) protein (261aa)
30S ribosomal protein S2 n=1 Tax=Nanoarchaeum equitans (strain Kin4-M) RepID=RS2_NANEQ id=5102942 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
rps2P; 30S ribosomal protein S2; K02967 small subunit ribosomal protein S2 Tax=CG_Pacearch_04
30S ribosomal protein S2
rifcsplowo2_01_scaffold_3261_3
RBG_16_Pacearchaeota_35_8_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(1413..1799)
DNA (387bp) protein (129aa)
DNA-directed RNA polymerase subunit K; K03055 DNA-directed RNA polymerase subunit K [EC:2.7.7.6] Tax=RBG_16_Pacearchaeota_35_8_curated
UPI000021CFC7 related cluster n=1 Tax=unknown RepID=UPI000021CFC7 id=5103847 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
rifcsplowo2_01_scaffold_3261_4
unknown

Not on your lists

comp(1841..2629)
DNA (789bp) protein (263aa)
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY id=5103846 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Ribosomal RNA-processing protein RRP42 n=1 Tax=Archaeoglobus sulfaticallidus PM70-1 RepID=N0BIN3_9EURY Tax=AR20
Ribosomal RNA-processing protein RRP42
rifcsplowo2_01_scaffold_3261_5
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(2683..3399)
DNA (717bp) protein (239aa)
exosome complex exonuclease Rrp41 n=1 Tax=Thermococcus zilligii AN1 RepID=UPI000299EC77 id=5103845 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
exosome complex exonuclease Rrp41; K11600 exosome complex component RRP41 Tax=RBG_13_Pacearchaeota_36_9_curated
exosome complex exonuclease Rrp41
rifcsplowo2_01_scaffold_3261_6
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(3454..4398)
DNA (945bp) protein (315aa)
rpr43; exosome RNA binding protein (EC:3.1.13.-); K03679 exosome complex component RRP4 id=5046927 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Probable exosome complex RNA-binding protein 1 Tax=AR11
putative exosome complex RNA-binding protein 1
rifcsplowo2_01_scaffold_3261_7
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists


comp(4456..5142)
DNA (687bp) protein (229aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI0003829AF7
RNA-associated protein; K14574 ribosome maturation protein SDO1 Tax=CG_Woesearch_02
Ribosome maturation protein SDO1-like protein
rifcsplowo2_01_scaffold_3261_8
CG_Pacearch_04, Pacearchaeota, Archaea

Not on your lists

comp(5221..5913)
DNA (693bp) protein (231aa)
proteasome subunit alpha (EC:3.4.25.1); K03432 proteasome alpha subunit [EC:3.4.25.1] Tax=CG_Pacearch_04
Proteasome subunit alpha n=3 Tax=Thermococcus RepID=PSA_THESM id=5103842 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Proteasome subunit alpha
rifcsplowo2_01_scaffold_3261_9
unknown

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comp(5903..6145)
DNA (243bp) protein (81aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3261_10
unknown

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comp(6252..7592)
DNA (1341bp) protein (447aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3261_11

Not on your lists

comp(7686..9023)
DNA (1338bp) protein (446aa)
Marine sediment metagenome DNA, contig: S01H1_L08522 {ECO:0000313|EMBL:GAF92533.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
rifcsplowo2_01_scaffold_3261_12
unknown

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comp(9040..9480)
DNA (441bp) protein (147aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3261_13
RBG_13_Berkelbacteria_40_8_curated, Berkelbacteria, Bacteria

Not on your lists

comp(9569..10087)
DNA (519bp) protein (173aa)
Adenylate cyclase n=1 Tax=Clostridium sp. CAG:253 RepID=R6LV89_9CLOT
adenylate cyclase Tax=RBG_13_Berkelbacteria_40_8_curated
adenylate cyclase
rifcsplowo2_01_scaffold_3261_14
Methanosarcina thermophila, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

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comp(10094..10456)
DNA (363bp) protein (121aa)
Ribonuclease P protein component 2 {ECO:0000256|HAMAP-Rule:MF_00755}; Short=RNase P component 2 {ECO:0000256|HAMAP-Rule:MF_00755};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00755};; Pop5 {ECO:0000256|HA
ribonuclease P (EC:3.1.26.5)
Ribonuclease P protein component 2 n=1 Tax=Thermococcus barophilus (strain DSM 11836 / MP) RepID=F0LHQ2_THEBM
rifcsplowo2_01_scaffold_3261_15
unknown

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comp(10750..10974)
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3261_16

Not on your lists

comp(11018..11665)
DNA (648bp) protein (216aa)
Ribonuclease P/MRP protein subunit RPP1 {ECO:0000313|EMBL:KHO46111.1}; EC=3.1.26.5 {ECO:0000313|EMBL:KHO46111.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037F7A10
Ribonuclease P protein component 3
rifcsplowo2_01_scaffold_3261_17
Archaeoglobus fulgidus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

Not on your lists

comp(11681..11902)
DNA (222bp) protein (74aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00036834B8
putative periplasmic or secreted lipoprotein
Putative periplasmic or secreted lipoprotein {ECO:0000313|EMBL:AIG98377.1}; TaxID=1344584 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Arc
rifcsplowo2_01_scaffold_3261_18
AR18, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(11906..12100)
DNA (195bp) protein (65aa)
hypothetical protein id=5044116 bin=GW2011_AR18 species=GW2011_AR18 genus=GW2011_AR18 taxon_order=GW2011_AR18 taxon_class=GW2011_AR18 phylum=Archaeon tax=GW2011_AR18 organism_group=Woesearchaeota organism_desc=gwa2_.30_20c
hypothetical protein Tax=AR18
hypothetical protein
rifcsplowo2_01_scaffold_3261_19

Not on your lists

comp(12154..12846)
DNA (693bp) protein (231aa)
Uridylate kinase {ECO:0000256|SAAS:SAAS00055191}; EC=2.7.4.22 {ECO:0000256|SAAS:SAAS00055199};; TaxID=1579364 species="Archaea.;" source="archaeon GW2011_AR1.;"
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037E64D8
putative uridylate kinase (UK) (Uridine monophosphate kinase) (UMP kinase)
rifcsplowo2_01_scaffold_3261_20

Not on your lists

12914..13501
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=uncultured bacterium RepID=K1Y8I8_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EKD33546.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
hypothetical protein
rifcsplowo2_01_scaffold_3261_21
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(13738..15201)
DNA (1464bp) protein (488aa)
ran binding protein 1 Tax=RBG_13_Pacearchaeota_36_9_curated
rifcsplowo2_01_scaffold_3261_22
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

15433..16419
DNA (987bp) protein (329aa)
id=5048010 Tax=CG_Woesearch_02
id=5048010 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_3261_23
unknown

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16746..16916
DNA (171bp) protein (57aa)

This feature has no annotations

rifcsplowo2_01_scaffold_3261_24
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

16913..19912
DNA (3000bp) protein (1000aa)
cellulose 1,4-beta-cellobiosidase (EC:3.2.1.91); K01225 cellulose 1,4-beta-cellobiosidase [EC:3.2.1.91] Tax=CG_Woesearch_02
id=5048012 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_3261_25
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

Not on your lists

comp(19992..21182)
DNA (1191bp) protein (397aa)
Putative uncharacterized protein Tax=RBG_13_Pacearchaeota_36_9_curated
Putative uncharacterized protein id=5048003 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_3261_26
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(21318..22559)
DNA (1242bp) protein (414aa)
Tax=AR6
rifcsplowo2_01_scaffold_3261_27
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(22615..23145)
DNA (531bp) protein (177aa)
Tax=AR6
rifcsplowo2_01_scaffold_3261_28
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(23233..23844)
DNA (612bp) protein (204aa)
Uncharacterized protein Tax=AR6
hypothetical protein id=4426939 bin=GWA2_CPR4_42_17 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=GWA2_CPR4_42_17 organism_group=CPR4 organism_desc=from megabin
rifcsplowo2_01_scaffold_3261_29
AR6, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(23846..24427)
DNA (582bp) protein (194aa)
hypothetical protein id=23734 bin=ACD22 species=ACD22 genus=ACD22 taxon_order=ACD22 taxon_class=ACD22 phylum=WWE3 tax=ACD22 organism_group=WWE3 organism_desc=WWE3
Tax=AR6
Displaying 29 items

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