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rifcsplowo2_01_scaffold_2244

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Displaying items 1-30 of 34 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_2244_1
unknown

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199..699
DNA (501bp) protein (167aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2244_2

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1049..1966
DNA (918bp) protein (306aa)
pyrB; aspartate carbamoyltransferase catalytic subunit; K00609 aspartate carbamoyltransferase catalytic subunit [EC:2.1.3.2] id=5046261 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
aspartate carbamoyltransferase (EC:2.1.3.2)
Marine sediment metagenome DNA, contig: S01H1_L04531 {ECO:0000313|EMBL:GAF68006.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
rifcsplowo2_01_scaffold_2244_3

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1963..2418
DNA (456bp) protein (152aa)
aspartate carbamoyltransferase (EC:2.1.3.2)
Marine sediment metagenome DNA, contig: S06H3_S22067 {ECO:0000313|EMBL:GAI55485.1}; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marine sediment metagen
Aspartate carbamoyltransferase regulatory chain id=4922845 bin=GWC2_Planctomycete_KSU_39_26 species=planctomycete KSU-1 genus=unknown taxon_order=Planctomycetales taxon_class=Planctomycetia phylum=Planctomycetes tax=GWC2_Planctomycete_KSU_39_26 organism_group=Planctomycetes
rifcsplowo2_01_scaffold_2244_4
R_OD1_Magasanikbacteria_47_16, Magasanikbacteria, Parcubacteria, Bacteria

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2420..3322
DNA (903bp) protein (301aa)
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] Tax=RIFCSPLOWO2_02_FULL_OD1_Magasanikbacteria_47_16_curated
dihydroorotate dehydrogenase; K00226 dihydroorotate dehydrogenase (fumarate) [EC:1.3.98.1] id=5094610 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
dihydroorotate dehydrogenase fumarate (EC:1.3.98.1)
rifcsplowo2_01_scaffold_2244_5
CG_Woesearch_02, Woesearchaeota, Archaea

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3319..4119
DNA (801bp) protein (267aa)
pyrK; dihydroorotate dehydrogenase electron transfer subunit PyrK (EC:1.3.98.1) Tax=CG_Woesearch_02
pyrK; dihydroorotate dehydrogenase electron transfer subunit PyrK (EC:1.3.98.1)
2-polyprenylphenol 6-hydroxylase n=1 Tax=Desulfobacter curvatus RepID=UPI00036D4B8B
rifcsplowo2_01_scaffold_2244_6

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4116..5306
DNA (1191bp) protein (397aa)
Dihydroorotase, multifunctional complex type n=1 Tax=Sebaldella termitidis (strain ATCC 33386 / NCTC 11300) RepID=D1AMD4_SEBTE
Marine sediment metagenome DNA, contig: S01H1_L03890 {ECO:0000313|EMBL:GAF77568.1}; Flags: Fragment;; TaxID=412755 species="unclassified sequences; metagenomes; ecological metagenomes.;" source="marin
dihydroorotase
rifcsplowo2_01_scaffold_2244_7

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5303..5929
DNA (627bp) protein (209aa)
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10); K00762 orotate phosphoribosyltransferase [EC:2.4.2.10] id=5046259 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rul
pyrE; orotate phosphoribosyltransferase (EC:2.4.2.10)
rifcsplowo2_01_scaffold_2244_8

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5911..6618
DNA (708bp) protein (236aa)
Orotidine 5'-phosphate decarboxylase; K01591 orotidine-5'-phosphate decarboxylase [EC:4.1.1.23] id=5046258 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
orotidine-5'-phosphate decarboxylase (EC:4.1.1.23)
Orotidine 5'-phosphate decarboxylase {ECO:0000313|EMBL:KHO53019.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rifcsplowo2_01_scaffold_2244_9

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6672..8729
DNA (2058bp) protein (686aa)
Putative copper amine oxidase-like protein id=5800765 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF62095.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
copper amine oxidase-like protein
rifcsplowo2_01_scaffold_2244_10

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8770..9693
DNA (924bp) protein (308aa)
Thioredoxin reductase (trxB-3); K00384 thioredoxin reductase (NADPH) [EC:1.8.1.9] id=5042292 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Thioredoxin reductase NADPH {ECO:0000313|EMBL:KHO46790.1}; EC=1.8.1.9 {ECO:0000313|EMBL:KHO46790.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
Thioredoxin reductase TrxB-3
rifcsplowo2_01_scaffold_2244_11
unknown

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comp(9700..10596)
DNA (897bp) protein (299aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2244_12
CG_Woesearch_03, Woesearchaeota, Archaea

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10686..11675
DNA (990bp) protein (330aa)
Transcriptional regulator; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein Tax=CG_Woesearch_03
AsnC family transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA id=5044008 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Transcriptional regulator
rifcsplowo2_01_scaffold_2244_13
RBG_16_Micrarchaeota_36_9_curated, Micrarchaeota, Archaea

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11713..12291
DNA (579bp) protein (193aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369A627
hypothetical protein Tax=RBG_16_Micrarchaeota_36_9_curated
hypothetical protein
rifcsplowo2_01_scaffold_2244_14
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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12282..12977
DNA (696bp) protein (232aa)
hypothetical protein; K07176 putative serine/threonine protein kinase Tax=RBG_13_Woesearchaeota_36_6_curated
Methylase id=5799699 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
hypothetical protein
rifcsplowo2_01_scaffold_2244_15
R_OD1_Wolfebacteria_42_16, Wolfebacteria, Parcubacteria, Bacteria

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comp(12829..13974)
DNA (1146bp) protein (382aa)
Uncharacterized protein n=1 Tax=Modestobacter marinus (strain BC501) RepID=I4F5M5_MODMB
transmembrane protein Tax=RIFCSPHIGHO2_02_FULL_OD1_Wolfebacteria_42_16_curated
hypothetical protein
rifcsplowo2_01_scaffold_2244_16

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13986..14306
DNA (321bp) protein (107aa)
methylated-DNA/protein-cysteine methyltransferase; K00567 methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63] id=5043579 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Methylated-DNA-[protein]-cysteine S-methyltransferase {ECO:0000313|EMBL:KHO46555.1}; EC=2.1.1.63 {ECO:0000313|EMBL:KHO46555.1};; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
cysteine methyltransferase
rifcsplowo2_01_scaffold_2244_17
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(14278..15201)
DNA (924bp) protein (308aa)
transcription factor tFIIB cyclin-like protein; K03124 transcription initiation factor TFIIB id=5043581 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tfb; transcription initiation factor IIB; K03124 transcription initiation factor TFIIB Tax=RBG_13_Woesearchaeota_36_6_curated
Transcription initiation factor IIB
rifcsplowo2_01_scaffold_2244_18
unknown

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comp(15329..16003)
DNA (675bp) protein (225aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2244_19
unknown

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comp(16112..16672)
DNA (561bp) protein (187aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2244_20
AR11, Woesearchaeaota, DPANN, Archaea

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16776..17570
DNA (795bp) protein (265aa)
Chromosome partitioning protein n=1 Tax=uncultured candidate division OP1 bacterium RepID=H5SJK3_9BACT
Chromosome partitioning protein Tax=AR11
cobyrinic acid ac-diamide synthase
rifcsplowo2_01_scaffold_2244_21
unknown

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comp(17560..17805)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_2244_22
AR10, Diapherotrites, DPANN, Archaea

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17865..19304
DNA (1440bp) protein (480aa)
prolyl-tRNA synthetase (EC:6.1.1.15)
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] id=5240603 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
prolyl-tRNA synthetase (EC:6.1.1.15); K01881 prolyl-tRNA synthetase [EC:6.1.1.15] Tax=AR10
rifcsplowo2_01_scaffold_2244_23

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19596..20663
DNA (1068bp) protein (356aa)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase / 5-amino-6-(5-phosphoribosylamino)uracil reductase {ECO:0000313|EMBL:KHO50883.1}; EC=3.5.4.26 {ECO:0000313|EMBL:KHO50883.1};; TaxID=1579371 speci
diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:1.1.1.193 3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Clostridium botulinum (strain H04402 065 / Type A5) RepID=E8ZP21_CLOB0
rifcsplowo2_01_scaffold_2244_24
CG_Woesearch_03, Woesearchaeota, Archaea

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20826..21464
DNA (639bp) protein (213aa)
NYN domain protein n=1 Tax=Leptospira noguchii str. 2006001870 RepID=K8KY27_9LEPT
NYN domain protein Tax=CG_Woesearch_03
protein of unknown function DUF88
rifcsplowo2_01_scaffold_2244_25
R_OP11_Levybacteria_42_15, Levybacteria, Microgenomates, Bacteria

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comp(21499..22164)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacillus cereus VD102 RepID=J8ICE8_BACCE
type 11 methyltransferase Tax=RIFCSPLOWO2_01_FULL_OP11_Levybacteria_42_15_curated
type 11 methyltransferase
rifcsplowo2_01_scaffold_2244_26
PER_GWF2_43_17, Peregrinibacteria, Bacteria

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22272..22877
DNA (606bp) protein (202aa)
GTP cyclohydrolase II; 3,4-dihydroxy-2-butanone 4-phosphate synthase (EC:4.1.2.- 3.5.4.25); K14652 3,4-dihydroxy 2-butanone 4-phosphate synthase / GTP cyclohydrolase II [EC:4.1.99.12 3.5.4.25] id=5098061 bin=PER_GWF2_43_18 species=PER_GWF2_42_17 genus=PER_GWF2_42_17 taxon_order=PER_GWF2_42_17 taxon_class=PER_GWF2_42_17 phylum=PER tax=PER_GWF2_43_18 organism_group=PER (Peregrinibacteria)
3,4-dihydroxy-2-butanone 4-phosphate synthase {ECO:0000313|EMBL:KKT02856.1}; TaxID=1619068 species="Bacteria; Peregrinibacteria.;" source="Peregrinibacteria bacterium GW2011_GWF2_43_17.;"
3,4-dihydroxy-2-butanone 4-phosphate synthase
rifcsplowo2_01_scaffold_2244_27
Altiarchaeum hamiconexum, Altiarchaeum, Altiarchaeales, Euryarchaeota, Archaea

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22870..23211
DNA (342bp) protein (114aa)
methylthioadenosine phosphorylase; K00772 5'-methylthioadenosine phosphorylase [EC:2.4.2.28] Tax=Altiarchaeum hamiconexum
Probable S-methyl-5'-thioinosine phosphorylase n=1 Tax=Methanotorris igneus (strain DSM 5666 / JCM 11834 / Kol 5) RepID=F6BCB5_METIK
methylthioadenosine phosphorylase
rifcsplowo2_01_scaffold_2244_28
AR17, Woesearchaeaota, DPANN, Archaea

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23702..24829
DNA (1128bp) protein (376aa)
hypothetical protein; K06176 tRNA pseudouridine13 synthase [EC:5.4.99.27] Tax=AR17
truD; tRNA pseudouridine synthase D (EC:5.4.99.-)
tRNA pseudouridine synthase D n=1 Tax=Hydrogenivirga sp. 128-5-R1-1 RepID=A8UTS5_9AQUI
rifcsplowo2_01_scaffold_2244_29
CG_Pacearch_02, Pacearchaeota, Archaea

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24863..26521
DNA (1659bp) protein (553aa)
argS; arginyl-tRNA synthetase (EC:6.1.1.19); K01887 arginyl-tRNA synthetase [EC:6.1.1.19] Tax=CG_Pacearch_02
argS; arginyl-tRNA synthetase (EC:6.1.1.19)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000369E28D
rifcsplowo2_01_scaffold_2244_30
CG_Woesearch_02, Woesearchaeota, Archaea

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26654..27358
DNA (705bp) protein (235aa)
Putative DNA alkylation repair enzyme n=1 Tax=Ignavibacterium album (strain DSM 19864 / JCM 16511 / NBRC 101810 / Mat9-16) RepID=I0AGK8_IGNAJ
Putative DNA alkylation repair enzyme Tax=CG_Woesearch_02
DNA alkylation repair enzyme
Displaying items 1-30 of 34 in total

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