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rifcsplowo2_01_scaffold_21827

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_21827_1
archaeon Loki, Lokiarchaeota, Archaea

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comp(1..117)
DNA (117bp) protein (39aa)
Hydroxymethylpyrimidine/phosphomethylpyrimidine kinase {ECO:0000313|EMBL:KKK41972.1}; TaxID=1538547 species="Archaea; Lokiarchaeota; 'Lokiarchaeum'.;" source="archaeon Loki.;"
hypothetical protein
Phosphomethylpyrimidine kinase id=4876958 bin=GWC2_Deltaproteobacteria_66_88 species=Syntrophobacter fumaroxidans genus=Syntrophobacter taxon_order=Syntrophobacterales taxon_class=Deltaproteobacteria phylum=Proteobacteria tax=GWC2_Deltaproteobacteria_66_88 organism_group=Deltaproteobacteria
rifcsplowo2_01_scaffold_21827_2
Sphingomonas paucimobilis, Sphingomonas, Sphingomonadales, Alphaproteobacteria, Proteobacteria, Bacteria

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203..2329
DNA (2127bp) protein (709aa)
ATPase AAA n=1 Tax=Sphingobium quisquiliarum P25 RepID=T0HAX3_9SPHN
ATPase AAA
ATPase AAA {ECO:0000313|EMBL:EZP72114.1}; TaxID=13689 species="Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas.;" source="Sphingomonas paucimobilis (Ps
rifcsplowo2_01_scaffold_21827_3
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(2331..3230)
DNA (900bp) protein (300aa)
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] Tax=CG_Woesearch_02
Galactose-1-phosphate uridylyltransferase; K00965 UDPglucose--hexose-1-phosphate uridylyltransferase [EC:2.7.7.12] id=5043631 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
galactose-1-phosphate uridylyltransferase
rifcsplowo2_01_scaffold_21827_4
unknown

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3374..4123
DNA (750bp) protein (250aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21827_5
unknown

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4120..4734
DNA (615bp) protein (205aa)

This feature has no annotations

rifcsplowo2_01_scaffold_21827_6
BJP_IG2102_BRC1_58_13, BRC1, Bacteria

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4740..5735
DNA (996bp) protein (332aa)
Malate dehydrogenase n=1 Tax=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) RepID=A5D2J2_PELTS
MmcK; malate dehydrogenase
Tax=BJP_IG2102_BRC1_58_13
rifcsplowo2_01_scaffold_21827_7
AR15, Woesearchaeaota, DPANN, Archaea

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5732..6097
DNA (366bp) protein (122aa)
CoA-binding domain protein id=5799765 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
CoA-binding domain protein Tax=AR15
CoA-binding protein
rifcsplowo2_01_scaffold_21827_8
Thermus aquaticus, Thermus, Thermales, Deinococci, Deinococcus-Thermus, Bacteria

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comp(6024..6647)
DNA (624bp) protein (208aa)
Pyridoxal 5'-phosphate synthase subunit PdxT {ECO:0000256|HAMAP-Rule:MF_01615}; EC=4.3.3.6 {ECO:0000256|HAMAP-Rule:MF_01615};; Pdx2 {ECO:0000256|HAMAP-Rule:MF_01615}; Pyridoxal 5'-phosphate synthase g
glutamine amidotransferase subunit PdxT (EC:2.6.-.-)
glutamine amidotransferase n=1 Tax=Thermus igniterrae RepID=UPI000365AEF3
rifcsplowo2_01_scaffold_21827_9
RIFOXYA2_FULL_Peregrinibacteria_33_21_curated, Peregrinibacteria, Bacteria

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comp(6641..7570)
DNA (930bp) protein (310aa)
pyridoxal biosynthesis lyase PdxS; K06215 pyridoxine biosynthesis protein [EC:4.-.-.-] id=5094819 bin=PER_GWF2_33_10 species=PER_GWF2_33_10 genus=PER_GWF2_33_10 taxon_order=PER_GWF2_33_10 taxon_class=PER_GWF2_33_10 phylum=PER tax=PER_GWF2_33_10 organism_group=PER (Peregrinibacteria) organism_desc=No RuBisCO in this genome
pyridoxine biosynthesis glutamine amidotransferase, synthase subunit Tax=RIFOXYA2_FULL_Peregrinibacteria_33_21_curated
Pyridoxal biosynthesis lyase pdxS
rifcsplowo2_01_scaffold_21827_10
Parcubacteria bacterium GW2011_GWA2_48_9, Parcubacteria, Bacteria

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7604..8134
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:KKU99681.1}; TaxID=1618850 species="Bacteria; Parcubacteria.;" source="Parcubacteria bacterium GW2011_GWA2_48_9.;"
id=5046915 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_21827_11
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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8140..8538
DNA (399bp) protein (133aa)
id=5046914 Tax=RBG_16_Euryarchaeota_41_19_curated
id=5046914 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_21827_12
AR9, Woesearchaeaota, DPANN, Archaea

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comp(8535..9200)
DNA (666bp) protein (222aa)
fibrillarin; K04795 fibrillarin-like pre-rRNA processing protein Tax=AR9
Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase id=5799901 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
fibrillarin
rifcsplowo2_01_scaffold_21827_13
GWA2_OD1_40_9, Nomurabacteria, Parcubacteria, Bacteria

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comp(9197..10483)
DNA (1287bp) protein (429aa)
Nop58p-like pre mRNA splicing protein Tax=GWA2_OD1_40_9
hypothetical protein; K14564 nucleolar protein 56 id=5048459 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
hypothetical protein
rifcsplowo2_01_scaffold_21827_14
Archaeoglobus profundus, Archaeoglobus, Archaeoglobales, Archaeoglobi, Euryarchaeota, Archaea

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10826..11134
DNA (309bp) protein (103aa)
CutA1 divalent ion tolerance protein n=1 Tax=Archaeoglobus profundus (strain DSM 5631 / JCM 9629 / NBRC 100127 / Av18) RepID=D2RE34_ARCPA
CutA1 divalent ion tolerance protein
CutA1 divalent ion tolerance protein {ECO:0000313|EMBL:ADB58378.1}; TaxID=572546 species="Archaea; Euryarchaeota; Archaeoglobi; Archaeoglobales; Archaeoglobaceae; Archaeoglobus.;" source="Archaeoglobu
Displaying 14 items

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