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rifcsplowo2_01_scaffold_4116

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_4116_1
Desulfitobacterium hafniense, Desulfitobacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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115..1035
DNA (921bp) protein (307aa)
Aminoglycoside phosphotransferase n=1 Tax=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) RepID=B8FRX0_DESHD
hypothetical protein
Aminoglycoside phosphotransferase {ECO:0000313|EMBL:ACL20108.1}; TaxID=272564 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfitobacterium.;" source="Desulfitobacterium
rifcsplowo2_01_scaffold_4116_2

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1094..2356
DNA (1263bp) protein (421aa)
MiaB-like tRNA modifying enzyme id=5800532 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
MiaB-like protein tRNA modifying enzyme {ECO:0000313|EMBL:AJF61863.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
MiaB-like tRNA modifying enzyme
rifcsplowo2_01_scaffold_4116_3
AR11, Woesearchaeaota, DPANN, Archaea

Not on your lists

comp(2343..2816)
DNA (474bp) protein (158aa)
Dihydrofolate reductase; K00287 dihydrofolate reductase [EC:1.5.1.3] id=7200627 bin=TA06_GWE2_final species=TA06 genus=TA06 taxon_order=TA06 taxon_class=TA06 phylum=TA06 tax=TA06_GWE2_final organism_group=TA06
dihydrofolate reductase (EC:1.5.1.3)
Dihydrofolate reductase Tax=AR11
rifcsplowo2_01_scaffold_4116_4
RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated, Magasanikbacteria, Parcubacteria, Bacteria

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comp(2818..3684)
DNA (867bp) protein (289aa)
protein ThyA; K00560 thymidylate synthase [EC:2.1.1.45] Tax=RIFOXYD2_FULL_OD1_Magasanikbacteria_41_14_curated
thymidylate synthase (EC:2.1.1.45)
Thymidylate synthase n=1 Tax=uncultured bacterium RepID=K1Y5U0_9BACT
rifcsplowo2_01_scaffold_4116_5
CG_Ignavi_01, Ignavibacteriales, Ignavibacteria, Ignavibacteriae, Bacteria

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3712..4482
DNA (771bp) protein (257aa)
hypothetical protein; K03575 A/G-specific adenine glycosylase [EC:3.2.2.-] Tax=CG_Ignavi_01
UPI0003CFF0BE related cluster n=1 Tax=unknown RepID=UPI0003CFF0BE
Helix-hairpin-helix motif:HhH-GPD
rifcsplowo2_01_scaffold_4116_6
CG_Desulfarul_01, Desulfarculales, Deltaproteobacteria, Proteobacteria, Bacteria

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4519..4800
DNA (282bp) protein (94aa)
AbrB family transcriptional regulator Tax=CG_Desulfarul_01
rifcsplowo2_01_scaffold_4116_7
unknown

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comp(4762..4872)
DNA (111bp) protein (37aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_8

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comp(4906..5154)
DNA (249bp) protein (83aa)
Uncharacterized protein id=5799527 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF60858.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
hypothetical protein
rifcsplowo2_01_scaffold_4116_9
AR4, Woesearchaeaota, DPANN, Archaea

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comp(5148..5414)
DNA (267bp) protein (89aa)
AbrB family transcriptional regulator id=5041622 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
AbrB family transcriptional regulator Tax=AR4
AbrB family transcriptional regulator
rifcsplowo2_01_scaffold_4116_10

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comp(5503..6483)
DNA (981bp) protein (327aa)
DNA repair and recombination protein RadA; K04483 DNA repair protein RadA id=5048364 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA repair and recombination protein RadA {ECO:0000256|HAMAP-Rule:MF_00348}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
RecA/RadA recombinase
rifcsplowo2_01_scaffold_4116_11
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

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comp(6509..6763)
DNA (255bp) protein (85aa)
id=5046763 Tax=RBG_13_Woesearchaeota_36_6_curated
id=5046763 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_4116_12
unknown

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comp(7062..7493)
DNA (432bp) protein (144aa)
Membrane-bound metal-dependent hydrolase n=394 Tax=Staphylococcus aureus RepID=A5IUW1_STAA9 id=5103128 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Membrane-bound metal-dependent hydrolase n=394 Tax=Staphylococcus aureus RepID=A5IUW1_STAA9 Tax=AR20
Membrane-bound metal-dependent hydrolase
rifcsplowo2_01_scaffold_4116_13

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comp(7490..8473)
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KHO52710.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
OB-fold tRNA/helicase-type nucleic acid binding protein; K07466 replication factor A1 id=5046768 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Nucleic acid binding OB-fold tRNA/helicase-type
rifcsplowo2_01_scaffold_4116_14
unknown

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comp(8492..10078)
DNA (1587bp) protein (529aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_15
unknown

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comp(10075..10695)
DNA (621bp) protein (207aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_16
unknown

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comp(10692..11171)
DNA (480bp) protein (160aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_17
GWA2_WOR_2_47_8_curated, WOR-2, Bacteria

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comp(11158..11961)
DNA (804bp) protein (268aa)
Tax=GWA2_WOR_2_47_8_curated
rifcsplowo2_01_scaffold_4116_18
unknown

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comp(11964..12713)
DNA (750bp) protein (250aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_19
unknown

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comp(12710..12943)
DNA (234bp) protein (78aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_20
unknown

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comp(12940..13719)
DNA (780bp) protein (260aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_21
unknown

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comp(13716..13865)
DNA (150bp) protein (50aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_22
unknown

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comp(13838..14842)
DNA (1005bp) protein (335aa)

This feature has no annotations

rifcsplowo2_01_scaffold_4116_23
AR15, Woesearchaeaota, DPANN, Archaea

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comp(15131..15403)
DNA (273bp) protein (91aa)
seg id=5800268 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
seg Tax=AR15
rifcsplowo2_01_scaffold_4116_24

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comp(15475..15969)
DNA (495bp) protein (165aa)
id=5046784 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO45972.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_4116_25
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(16143..16610)
DNA (468bp) protein (156aa)
id=5046785 Tax=CG_Woesearch_02
id=5046785 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
rifcsplowo2_01_scaffold_4116_26
CG_Woesearch_02, Woesearchaeota, Archaea

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comp(16699..17694)
DNA (996bp) protein (332aa)
transmembrane_regions Tax=CG_Woesearch_02
transmembrane_regions id=5041857 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
rifcsplowo2_01_scaffold_4116_27
AR11, Woesearchaeaota, DPANN, Archaea

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comp(17715..18218)
DNA (504bp) protein (168aa)
id=5046787 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsplowo2_01_scaffold_4116_28
Sandaracinus amylolyticus, Sandaracinus, Myxococcales, Deltaproteobacteria, Proteobacteria, Bacteria

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comp(18215..22204)
DNA (3990bp) protein (1330aa)
Putative uncharacterized protein n=1 Tax=Anaeromyxobacter sp. (strain Fw109-5) RepID=A7HED4_ANADF
Uncharacterized protein {ECO:0000313|EMBL:AKF03098.1}; TaxID=927083 species="Bacteria; Proteobacteria; Deltaproteobacteria; Myxococcales; Sorangiineae; Sandaracinaceae; Sandaracinus.;" source="Sandara
hypothetical protein
Displaying 28 items

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