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rifcsplowo2_01_scaffold_20106

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_20106_1
unknown

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2..226
DNA (225bp) protein (75aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20106_2
unknown

Not on your lists

comp(335..580)
DNA (246bp) protein (82aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20106_3

Not on your lists

733..1092
DNA (360bp) protein (120aa)
hypothetical protein
hypothetical protein id=5240829 bin=GW2011_AR10_complete species=GW2011_AR10 genus=GW2011_AR10 taxon_order=GW2011_AR10 taxon_class=GW2011_AR10 phylum=Archaeon tax=GW2011_AR10_complete organism_group=Archaeon organism_desc=closed, complete GWA2_AR10
Uncharacterized protein {ECO:0000313|EMBL:AJF59821.1}; TaxID=1579370 species="Archaea.;" source="archaeon GW2011_AR10.;"
rifcsplowo2_01_scaffold_20106_4
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1095..1487)
DNA (393bp) protein (131aa)
hypothetical protein; K07163 Tax=CG_Woesearch_02
Zn-ribbon containing protein id=5800623 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Zn-ribbon containing protein
rifcsplowo2_01_scaffold_20106_5
CG_Woesearch_02, Woesearchaeota, Archaea

Not on your lists

comp(1570..1953)
DNA (384bp) protein (128aa)
Uncharacterized protein n=2 Tax=Methanothermobacter RepID=D9PV24_METTM id=5103011 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
hypothetical protein
Uncharacterized protein Tax=CG_Woesearch_02
rifcsplowo2_01_scaffold_20106_6
RBG_13_Woesearchaeota_36_6_curated, Woesearchaeota, DPANN, Archaea

Not on your lists

comp(1968..2603)
DNA (636bp) protein (212aa)
small GTP-binding protein; K06883 Tax=RBG_13_Woesearchaeota_36_6_curated
small GTP-binding protein; K06883 id=5044930 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Small GTP-binding protein
rifcsplowo2_01_scaffold_20106_7

Not on your lists

2706..3257
DNA (552bp) protein (184aa)
seg id=5042267 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Uncharacterized protein {ECO:0000313|EMBL:KHO46765.1}; TaxID=1579365 species="Archaea.;" source="archaeon GW2011_AR3.;"
rifcsplowo2_01_scaffold_20106_8

Not on your lists

3254..3943
DNA (690bp) protein (230aa)
hypothetical protein
id=5044932 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Uncharacterized protein {ECO:0000313|EMBL:KHO46028.1}; TaxID=1579366 species="Archaea.;" source="archaeon GW2011_AR4.;"
rifcsplowo2_01_scaffold_20106_9

Not on your lists

3940..5454
DNA (1515bp) protein (505aa)
Putative ATPase id=5799867 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
Uncharacterized protein {ECO:0000313|EMBL:AJF61198.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
ATPase
rifcsplowo2_01_scaffold_20106_10
unknown

Not on your lists

comp(5451..5888)
DNA (438bp) protein (146aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20106_11

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5961..7178
DNA (1218bp) protein (406aa)
DNA double-strand break repair protein Mre11 id=5799870 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
DNA double-strand break repair protein Mre11 {ECO:0000313|EMBL:AJF61201.1}; TaxID=1579373 species="Archaea.;" source="archaeon GW2011_AR15.;"
Metallophosphoesterase
rifcsplowo2_01_scaffold_20106_12
RifOxyA12_full_Deltaproteobacteria_61_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7150..7656)
DNA (507bp) protein (169aa)
cyclophilin type peptidyl-prolyl cis-trans isomerase; K03767 peptidyl-prolyl cis-trans isomerase A (cyclophilin A) [EC:5.2.1.8] Tax=RifOxyA12_full_Deltaproteobacteria_61_11_curated
peptidylprolyl isomerase n=1 Tax=Desulfovibrio desulfuricans RepID=UPI00037243CD
peptidyl-prolyl isomerase
rifcsplowo2_01_scaffold_20106_13

Not on your lists


comp(7716..8261)
DNA (546bp) protein (182aa)
DITP/XTP pyrophosphatase {ECO:0000313|EMBL:KHO51307.1}; EC=3.6.1.19 {ECO:0000313|EMBL:KHO51307.1};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
Non-canonical purine NTP pyrophosphatase n=1 Tax=Methanopyrus kandleri (strain AV19 / DSM 6324 / JCM 9639 / NBRC 100938) RepID=NTPA_METKA
xanthosine triphosphate pyrophosphatase
rifcsplowo2_01_scaffold_20106_14
AR19, Pacearchaeaota, DPANN, Archaea

Not on your lists

comp(8258..9181)
DNA (924bp) protein (308aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=AR19
Asparaginyl-tRNA synthetase n=2 Tax=Aciduliprofundum boonei (strain DSM 19572 / T469) RepID=B5IGF4_ACIB4 id=5103855 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
Asparaginyl-tRNA synthetase
rifcsplowo2_01_scaffold_20106_15
CG_Pacearch_03, Pacearchaeota, Archaea

Not on your lists

comp(9135..9440)
DNA (306bp) protein (102aa)
asparaginyl-tRNA synthetase; K01893 asparaginyl-tRNA synthetase [EC:6.1.1.22] Tax=CG_Pacearch_03
Asparaginyl-tRNA synthetase id=4203366 bin=PER_GWC2_41_7 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=PER_GWC2_41_7 organism_group=PER (Peregrinibacteria)
asparaginyl-tRNA synthetase
rifcsplowo2_01_scaffold_20106_16
unknown

Not on your lists

comp(9509..9598)
DNA (90bp) protein (30aa)

This feature has no annotations

rifcsplowo2_01_scaffold_20106_17
Bradyrhizobium sp. WSM471, Bradyrhizobium, Rhizobiales, Alphaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9595..11262)
DNA (1668bp) protein (556aa)
asparagine synthetase B n=1 Tax=Bradyrhizobium elkanii RepID=UPI00036C6F13
Asparagine synthase (Glutamine-hydrolyzing) {ECO:0000313|EMBL:EHR01467.1}; TaxID=319017 species="Bacteria; Proteobacteria; Alphaproteobacteria; Rhizobiales; Bradyrhizobiaceae; Bradyrhizobium.;" source
asparagine synthase
rifcsplowo2_01_scaffold_20106_18
CG_Micra_02, Micraarchaeota, Archaea

Not on your lists

11371..11787
DNA (417bp) protein (139aa)
Transcriptional regulator, lrp family n=1 Tax=Candidatus Caldiarchaeum subterraneum RepID=E6N8C4_9ARCH id=5103635 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
AsnC family transcriptional regulator Tax=CG_Micra_02
Transcriptional regulator, lrp family
rifcsplowo2_01_scaffold_20106_19
RBG_16_Deltaproteobacteria_44_11_curated, Deltaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11792..12409
DNA (618bp) protein (206aa)
amino acid transporter n=1 Tax=Bacillus sp. FJAT-13831 RepID=UPI0002EA7022
hypothetical protein Tax=RBG_16_Deltaproteobacteria_44_11_curated
lysine exporter protein LysE/YggA
rifcsplowo2_01_scaffold_20106_20
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

Not on your lists

comp(12406..12738)
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) RepID=Q8TSM8_METAC
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
rifcsplowo2_01_scaffold_20106_21
Peptococcaceae bacterium SCADC1_2_3, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12735..13016)
DNA (282bp) protein (94aa)
Putative uncharacterized protein n=1 Tax=uncultured archaeon RepID=D1JEN8_9ARCH
Uncharacterized protein {ECO:0000313|EMBL:KFD42495.1}; TaxID=1487582 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae.;" source="Peptococcaceae bacterium SCADC1_2_3.;"
nucleotidyltransferase
rifcsplowo2_01_scaffold_20106_22
AR4, Woesearchaeaota, DPANN, Archaea

Not on your lists


comp(13112..14008)
DNA (897bp) protein (299aa)
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] id=5043742 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
aspartyl-tRNA synthetase; K01876 aspartyl-tRNA synthetase [EC:6.1.1.12] Tax=AR4
aspartyl-tRNA synthetase (EC:6.1.1.12)
Displaying 22 items

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