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rifcsplowo2_01_scaffold_17920

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_17920_1
unknown

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74..817
DNA (744bp) protein (248aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17920_2
AR11, Woesearchaeaota, DPANN, Archaea

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868..1062
DNA (195bp) protein (65aa)
id=5046340 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Tax=AR11
rifcsplowo2_01_scaffold_17920_3
unknown

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comp(1278..1415)
DNA (138bp) protein (46aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17920_4

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1521..2447
DNA (927bp) protein (309aa)
Phosphate uptake regulator {ECO:0000313|EMBL:AIF18660.1}; TaxID=1456522 species="Archaea; Euryarchaeota; environmental samples.;" source="uncultured marine group II/III euryarchaeote KM3_83_G03.;"
Phosphate uptake regulator, PhoU id=5043747 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
looped-hinge helix DNA binding protein domain protein, AbrB family
rifcsplowo2_01_scaffold_17920_5
unknown

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comp(2432..3778)
DNA (1347bp) protein (449aa)

This feature has no annotations

rifcsplowo2_01_scaffold_17920_6
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(3852..4241)
DNA (390bp) protein (130aa)
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type Tax=CG_Woesearch_01
resolvase, holliday junction-type; K03552 holliday junction resolvase, archaea type id=5046341 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
Resolvase, Holliday junction-type
rifcsplowo2_01_scaffold_17920_7
AR11, Woesearchaeaota, DPANN, Archaea

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comp(4308..5201)
DNA (894bp) protein (298aa)
rnz; ribonuclease Z (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] Tax=AR11
rnz; ribonuclease Z Rnz (EC:3.1.26.11); K00784 ribonuclease Z [EC:3.1.26.11] id=5046343 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
RNAse Z
rifcsplowo2_01_scaffold_17920_8
CG_Woesearch_03, Woesearchaeota, Archaea

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5334..6779
DNA (1446bp) protein (482aa)
Uncharacterized protein n=1 Tax=Haloferax elongans ATCC BAA-1513 RepID=M0HJD0_9EURY
ATPase AAA; K07133 Tax=CG_Woesearch_03
hypothetical protein
rifcsplowo2_01_scaffold_17920_9
CG_Woesearch_02, Woesearchaeota, Archaea

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6813..7334
DNA (522bp) protein (174aa)
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] Tax=CG_Woesearch_02
tRNA-splicing endonuclease subunit alpha (EC:3.1.27.9); K01170 tRNA-intron endonuclease, archaea type [EC:3.1.27.9] id=5046344 bin=GW2011_AR3 species=GW2011_AR3 genus=GW2011_AR3 taxon_order=GW2011_AR3 taxon_class=GW2011_AR3 phylum=Archaeon tax=GW2011_AR3 organism_group=Woesearchaeota organism_desc=gwa2_.43_13b
tRNA-intron endonuclease
rifcsplowo2_01_scaffold_17920_10
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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7869..8810
DNA (942bp) protein (314aa)
Transcriptional regulator n=1 Tax=Thermoplasmatales archaeon SCGC AB-539-N05 RepID=M7TC38_9EURY id=5103398 bin=GW2011_AR20_complete species=GW2011_AR20 genus=GW2011_AR20 taxon_order=GW2011_AR20 taxon_class=GW2011_AR20 phylum=Archaeon tax=GW2011_AR20_complete organism_group=Woesearchaeota organism_desc=GWA2_A_30_20A_AR20 Complete genome
MarR family transcriptional regulator Tax=RBG_13_Pacearchaeota_36_9_curated
Transcriptional regulator
rifcsplowo2_01_scaffold_17920_11
RBG_13_Pacearchaeota_36_9_curated, Pacearchaeota, DPANN, Archaea

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comp(8807..9772)
DNA (966bp) protein (322aa)
transcriptional regulator; K03718 Lrp/AsnC family transcriptional regulator, regulator for asnA, asnC and gidA Tax=RBG_13_Pacearchaeota_36_9_curated
putR; proline dehydrogenase; K03719 Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein id=5041688 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
Lrp/AsnC family transcriptional regulator, leucine-responsive regulatory protein
Displaying 11 items

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