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rifcsplowo2_01_scaffold_7218

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
rifcsplowo2_01_scaffold_7218_1

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comp(1..411)
DNA (411bp) protein (137aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI000374B7B8
NusA protein-like protein {ECO:0000313|EMBL:KHO53422.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
NusA family KH domain-containing protein
rifcsplowo2_01_scaffold_7218_2
CG_Woesearch_01, Woesearchaeota, Archaea

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comp(412..678)
DNA (267bp) protein (89aa)
hypothetical protein; K02908 large subunit ribosomal protein L30e Tax=CG_Woesearch_01
NEQ179 id=5799591 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
50S ribosomal protein L30e
rifcsplowo2_01_scaffold_7218_3

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comp(679..1812)
DNA (1134bp) protein (378aa)
rpoA2; DNA-directed RNA polymerase subunit A'' (EC:2.7.7.6)
DNA-directed RNA polymerase subunit A {ECO:0000313|EMBL:KHO53420.1}; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit A'' id=5800703 bin=GW2011_AR15 species=GW2011_AR15 genus=GW2011_AR15 taxon_order=GW2011_AR15 taxon_class=GW2011_AR15 phylum=Archaeon tax=GW2011_AR15 organism_group=Woesearchaeota organism_desc=One curated contig, not circularized
rifcsplowo2_01_scaffold_7218_4
AR11, Woesearchaeaota, DPANN, Archaea

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comp(1809..4487)
DNA (2679bp) protein (893aa)
DNA-directed RNA polymerase subunit A' (EC:2.7.7.48); K03041 DNA-directed RNA polymerase subunit A' [EC:2.7.7.6] id=5043970 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_7218_5

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comp(4552..6354)
DNA (1803bp) protein (601aa)
DNA-directed RNA polymerase {ECO:0000256|RuleBase:RU000431}; EC=2.7.7.6 {ECO:0000256|RuleBase:RU000431};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
rpoB2; DNA-directed RNA polymerase, subunit B' (EC:2.7.7.6); K03044 DNA-directed RNA polymerase subunit B' [EC:2.7.7.6] id=5043971 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_7218_6
AR11, Woesearchaeaota, DPANN, Archaea

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comp(6359..7855)
DNA (1497bp) protein (499aa)
DNA-directed RNA polymerase subunit B (EC:2.7.7.6); K13798 DNA-directed RNA polymerase subunit B [EC:2.7.7.6] id=5043972 bin=GW2011_AR4 species=GW2011_AR4 genus=GW2011_AR4 taxon_order=GW2011_AR4 taxon_class=GW2011_AR4 phylum=Archaeon tax=GW2011_AR4 organism_group=Woesearchaeota organism_desc=gwa2_.45_18
DNA-directed RNA polymerase Tax=AR11
DNA-directed RNA polymerase
rifcsplowo2_01_scaffold_7218_7

Not on your lists

comp(7848..8096)
DNA (249bp) protein (83aa)
DNA-directed RNA polymerase subunit H {ECO:0000256|HAMAP-Rule:MF_00025}; EC=2.7.7.6 {ECO:0000256|HAMAP-Rule:MF_00025};; TaxID=1579371 species="Archaea.;" source="archaeon GW2011_AR11.;"
DNA-directed RNA polymerase subunit H (EC:2.7.7.6)
DNA-directed RNA polymerase subunit H n=1 Tax=nanoarchaeote Nst1 RepID=R1E493_9ARCH
rifcsplowo2_01_scaffold_7218_8
GWF2_Lentisphaerae_57_35_curated, Lentisphaerae, Bacteria

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comp(8598..9977)
DNA (1380bp) protein (460aa)
aspA; aspartate ammonia-lyase (EC:4.2.1.2); K01744 aspartate ammonia-lyase [EC:4.3.1.1] Tax=GWF2_Lentisphaerae_57_35_curated
Fumarate hydratase class II id=4528489 bin=GWF2_Lentisphaerae_57_35 species=unknown genus=Candidatus Parvarchaeum taxon_order=unknown taxon_class=unknown phylum=Euryarchaeota tax=GWF2_Lentisphaerae_57_35 organism_group=Lentisphaerae organism_desc=a459
aspartate ammonia-lyase
rifcsplowo2_01_scaffold_7218_9
unknown

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comp(10022..10396)
DNA (375bp) protein (125aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7218_10
RBG_16_Euryarchaeota_41_19_curated, Euryarchaeota, Archaea

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10808..11437
DNA (630bp) protein (210aa)
Putative uncharacterized protein n=1 Tax=Archaeoglobus veneficus (strain DSM 11195 / SNP6) RepID=F2KMG1_ARCVS
hypothetical protein Tax=RBG_16_Euryarchaeota_41_19_curated
hypothetical protein
rifcsplowo2_01_scaffold_7218_11
Thermococcus paralvinellae, Thermococcus, Thermococcales, Thermococci, Euryarchaeota, Archaea

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11434..12348
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Ferroglobus placidus (strain DSM 10642 / AEDII12DO) RepID=D3S2W8_FERPA
Hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AHF80035.1}; TaxID=582419 species="Archaea; Euryarchaeota; Thermococci; Thermococcales; Thermococcaceae; Thermococcus.;" source="Thermococcus paralvinellae.;"
rifcsplowo2_01_scaffold_7218_12
AR9, Woesearchaeaota, DPANN, Archaea

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12928..13329
DNA (402bp) protein (134aa)
hypothetical protein n=1 Tax=Nanoarchaeota archaeon SCGC AAA011-L22 RepID=UPI00037721BA
Tax=AR9
rifcsplowo2_01_scaffold_7218_13

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13316..13909
DNA (594bp) protein (198aa)
plasmid pRiA4b ORF-3 family protein id=19903 bin=ACD20 species=ACD20 genus=ACD20 taxon_order=ACD20 taxon_class=ACD20 phylum=Melainabacteria tax=ACD20 organism_group=Novel_Cyano/Firm organism_desc=Novel_Cyano/Firm
Plasmid pRiA4b ORF-3 family protein {ECO:0000313|EMBL:EKE02169.1}; TaxID=77133 species="Bacteria; environmental samples.;" source="uncultured bacterium.;"
Plasmid pRiA4b ORF-3-like protein
rifcsplowo2_01_scaffold_7218_14
unknown

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13999..14196
DNA (198bp) protein (66aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7218_15
GWA2_OD1_31_28_partial, Parcubacteria, Bacteria

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14177..14518
DNA (342bp) protein (114aa)
Uncharacterized protein n=1 Tax=Rhodococcus opacus (strain B4) RepID=C1AXA3_RHOOB
hypothetical protein Tax=GWA2_OD1_31_28_partial
hypothetical protein
rifcsplowo2_01_scaffold_7218_16
unknown

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14535..16160
DNA (1626bp) protein (542aa)

This feature has no annotations

rifcsplowo2_01_scaffold_7218_17
unknown

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comp(16377..16496)
DNA (120bp) protein (40aa)

This feature has no annotations

Displaying 17 items

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